| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,337,717 | G→T | 46.9% | A282E (GCG→GAG) | dcuB ← | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,337,717 | 0 | G | T | 46.9% | 167.8 / inf | 251 | A282E (GCG→GAG) | dcuB | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor |
| Reads supporting (aligned to +/- strand): ref base G (68/65); new base T (61/57); total (129/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 255 total aligned reads displayed.
GCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTC > CP009273/4337569‑4337866 | gCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAgcgc > 1:3931469/1‑150 (MQ=255) cccTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTcc < 2:3724112/150‑1 (MQ=255) ccTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGccc > 2:3047107/1‑150 (MQ=255) cTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTcccc < 1:1637778/150‑1 (MQ=255) cTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGcccc < 2:1171798/150‑1 (MQ=255) tGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCg < 2:1849863/150‑1 (MQ=255) tGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCg < 1:2254871/150‑1 (MQ=255) gAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCgg > 1:3523958/1‑150 (MQ=255) gAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCgg > 2:3324849/1‑150 (MQ=255) atgtCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGAGACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTc < 2:519165/147‑1 (MQ=255) aTTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTc > 2:2672041/1‑150 (MQ=255) ttCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTcag < 1:1276465/150‑1 (MQ=255) ttCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTcag < 1:2530983/150‑1 (MQ=255) tGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAAc > 2:4337722/1‑150 (MQ=255) gcACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATc > 1:4011789/1‑150 (MQ=255) cACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACTCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCt < 2:2235619/150‑1 (MQ=255) cACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCt < 2:4431386/150‑1 (MQ=255) gAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAAt < 2:3118355/150‑1 (MQ=255) cATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAAc > 2:4468900/1‑150 (MQ=255) aTGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAAcc < 1:3797669/150‑1 (MQ=255) aTGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAAcc > 1:2092003/1‑150 (MQ=255) gTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGt > 1:1753435/1‑150 (MQ=255) gTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGt > 1:1977848/1‑150 (MQ=255) tttCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTa < 2:1907829/150‑1 (MQ=255) ttCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTAc > 1:1017383/1‑150 (MQ=255) tCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTAcc < 2:3019799/150‑1 (MQ=255) tCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTAcc < 1:1542720/150‑1 (MQ=255) tCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTAcc < 1:3657132/150‑1 (MQ=255) tGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCAt > 1:2406584/1‑150 (MQ=255) tGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCAt > 2:2430643/1‑150 (MQ=255) ccatccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCg < 1:2923453/150‑1 (MQ=255) catccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGa < 1:276136/150‑1 (MQ=255) atccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGAc > 1:1099589/1‑150 (MQ=255) atccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGAc > 1:1672255/1‑150 (MQ=255) atccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGAc > 1:3066775/1‑150 (MQ=255) atccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGAc > 2:3524721/1‑150 (MQ=255) atccatGCGATACCGTACACCGCCACGAGGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGAc < 1:315146/150‑1 (MQ=255) tccatGCGATACCGTACACCGCCACTATGTCGATCATACAGGAACTGAAGACTTCGTTTTTTGAGTTAGACGCGGGATTGTTTTTTGTCTTGTTATTAATCAGCGCCCCTGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACa < 1:3241504/150‑1 (MQ=255) tccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACa < 2:2693421/150‑1 (MQ=255) ccatGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAg < 2:2923949/150‑1 (MQ=255) catGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGc > 1:4488350/1‑150 (MQ=255) catGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGc < 2:3176531/150‑1 (MQ=255) cGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGtt > 1:227203/1‑150 (MQ=255) gATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGttt < 2:546473/150‑1 (MQ=255) gATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGttt < 1:3869346/150‑1 (MQ=255) aTACCGTACACCGCCACGATGGCGATCATACCGGAACGTAAGACTTCGTTTTTTGAGATAGACGCGTGATTGGTTTTTGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTNg < 2:838487/150‑1 (MQ=255) aTACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTg > 2:1481471/1‑150 (MQ=255) tACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTgc < 1:3763676/150‑1 (MQ=255) aCCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTgcc < 1:1715566/150‑1 (MQ=255) gTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTgccgcc < 1:2815307/150‑1 (MQ=255) gTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTgccgcc < 2:1729771/150‑1 (MQ=255) cacCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGaa < 1:1322152/150‑1 (MQ=255) acCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAg < 1:2240646/150‑1 (MQ=255) ccGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAgg < 2:1354024/150‑1 (MQ=255) aCGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGa > 2:3343753/1‑150 (MQ=255) cGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGAc > 1:2645773/1‑150 (MQ=255) gATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACg > 1:1585274/1‑150 (MQ=255) tGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCa > 1:537706/1‑150 (MQ=255) gCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAgg < 2:324623/150‑1 (MQ=255) gATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTc > 1:4612690/1‑150 (MQ=255) gATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTc < 2:815854/150‑1 (MQ=255) gATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTc < 1:1786579/150‑1 (MQ=255) tCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCg > 2:1654171/1‑150 (MQ=255) tCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCg > 2:1975610/1‑150 (MQ=255) cATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGa < 2:744844/150‑1 (MQ=255) tACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAAt < 1:390790/150‑1 (MQ=255) ggaacggaaGACTTCGTTTTTTTAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGc < 2:1018067/150‑1 (MQ=255) cggaaGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCa < 1:1483803/150‑1 (MQ=255) gaaGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCaag > 2:358389/1‑150 (MQ=255) gaaGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCaag > 2:502008/1‑150 (MQ=255) gaaGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCaag < 1:4419451/150‑1 (MQ=255) aaGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCaaga > 2:2252303/1‑150 (MQ=255) gACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCaagaag > 2:1819382/1‑150 (MQ=255) ttCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGc > 1:2425186/1‑150 (MQ=255) ttCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGc < 2:4021762/150‑1 (MQ=255) cGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGa > 2:1386024/1‑150 (MQ=255) ttttttGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACt < 1:907841/150‑1 (MQ=255) ttttGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTAc > 1:3234127/1‑150 (MQ=255) tttGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACa < 1:364942/150‑1 (MQ=255) tttGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACa < 1:758273/150‑1 (MQ=255) tGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGc < 2:1114800/150‑1 (MQ=255) gagaTAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCg > 2:4553243/1‑150 (MQ=255) gaTAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGAt > 2:1517358/1‑150 (MQ=255) aTAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGAtt < 2:2207122/150‑1 (MQ=255) cgcgGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGcccc < 1:4047634/150‑1 (MQ=255) gATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGa > 1:350262/1‑150 (MQ=255) ggTTTTGGTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAAt > 2:3935665/1‑150 (MQ=255) tGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCcaca > 2:2333308/1‑150 (MQ=255) gTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAACATCCACAtt < 2:261740/150‑1 (MQ=255) gTCAGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACAtt > 2:3006128/1‑150 (MQ=255) cAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTgc > 1:800256/1‑150 (MQ=255) aGGATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTgcc > 1:1836230/1‑150 (MQ=255) ggATAATAATCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTgcca < 1:3485275/150‑1 (MQ=255) ataataATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTgccagc > 1:4023157/1‑150 (MQ=255) taataaTCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTgccagcc < 2:1455420/150‑1 (MQ=255) ataatCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGccagccag < 2:3562011/150‑1 (MQ=255) taatCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGt > 2:1762587/1‑150 (MQ=255) aatCAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGtt < 1:2766867/150‑1 (MQ=255) cAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCt > 2:2104593/1‑150 (MQ=255) cAGCTCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCt < 1:4092040/150‑1 (MQ=255) | GCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTTTTTTGAGATAGACGCGGGATTGGTTTTGGTCAGGATAATAATCAGCGCCCCGGTCAGCAGCATAAACATCTGAATAACCAGTACCATCGACAGCGGTTTGCCGCCGAAGGATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTC > CP009273/4337569‑4337866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |