| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,475,510 | G→T | 12.0% | R87S (CGT→AGT) | pepA ← | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,475,510 | 0 | G | T | 12.0% | 1044.5 / 76.7 | 300 | R87S (CGT→AGT) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Reads supporting (aligned to +/- strand): ref base G (132/132); new base T (19/17); total (151/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
CGTCTCTTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTGATTT > CP009273/4475361‑4475659 | cGTCTCTTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACg < 1:3287105/150‑1 (MQ=255) tctTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCa > 1:4480251/1‑150 (MQ=255) tttGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATcc > 1:2458177/1‑150 (MQ=255) ttGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCa < 2:20754/150‑1 (MQ=255) ttGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCa > 2:4061782/1‑150 (MQ=255) cGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTc > 2:2287314/1‑150 (MQ=255) gTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCa < 2:3427956/150‑1 (MQ=255) tctcGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCAc < 1:4255541/150‑1 (MQ=255) tctcGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCAc > 2:4129912/1‑150 (MQ=255) tcGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGt > 1:3687238/1‑150 (MQ=255) cGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGtt > 1:3868318/1‑150 (MQ=255) gACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTc > 1:1771898/1‑150 (MQ=255) gCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTg < 2:2791242/150‑1 (MQ=255) gACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGc > 1:2312655/1‑150 (MQ=255) cGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCaa < 2:1268320/150‑1 (MQ=255) aCTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCa > 1:505110/1‑150 (MQ=255) tttCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAAt > 1:957369/1‑150 (MQ=255) tttCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAAt < 2:3669145/150‑1 (MQ=255) ttCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCTGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATa < 2:1890722/150‑1 (MQ=255) ttCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATa > 1:4126257/1‑150 (MQ=255) ttCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATa > 1:821162/1‑150 (MQ=255) tCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATaa > 2:1658495/1‑150 (MQ=255) gtagtTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGgag < 2:4070156/150‑1 (MQ=255) tagtTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGgaga < 2:3351868/150‑1 (MQ=255) gttgttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAAt < 2:1800851/150‑1 (MQ=255) gttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCg > 1:2888049/1‑150 (MQ=255) ttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGc < 1:4558485/150‑1 (MQ=255) tACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCt < 2:3984432/150‑1 (MQ=255) tACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCt < 1:1847800/150‑1 (MQ=255) cGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTAGCTCg < 1:4078729/150‑1 (MQ=255) cGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCg > 1:3471902/1‑150 (MQ=255) ggCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCgg > 2:1438827/1‑150 (MQ=255) ggCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCgg < 2:3575672/150‑1 (MQ=255) ggCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCgg < 1:3734979/150‑1 (MQ=255) cTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGaaa > 1:1322721/1‑150 (MQ=255) tttAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAg < 1:3180642/150‑1 (MQ=255) aaCGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTAc < 1:1935719/150‑1 (MQ=255) aaCGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTAc < 2:3570259/150‑1 (MQ=255) cGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACAt < 1:2959198/150‑1 (MQ=255) tGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTc < 1:1013571/150‑1 (MQ=255) aGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGa < 2:802750/150‑1 (MQ=255) cTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAAc < 1:546329/150‑1 (MQ=255) cagtcagAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACAt < 1:4450037/150‑1 (MQ=255) agtcagAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATg < 2:2705078/150‑1 (MQ=255) agtcagAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATg < 2:4317051/150‑1 (MQ=255) gtcagAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATgg > 2:2018929/1‑150 (MQ=255) cagAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTg < 1:1400588/150‑1 (MQ=255) gAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgca > 2:3869455/1‑150 (MQ=255) gAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgca > 2:1092229/1‑150 (MQ=255) aaaGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgcag > 1:3564358/1‑150 (MQ=255) aaaGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgcag > 1:437673/1‑150 (MQ=255) aGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgcagca > 1:2757354/1‑150 (MQ=255) aGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGcaaca < 1:2068857/150‑1 (MQ=255) cGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGt < 2:3188214/150‑1 (MQ=255) ttCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTTCATTCGGAACATGGTGCAGCAACAATGTCTg > 2:2556353/1‑150 (MQ=255) ttCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTg > 2:3353126/1‑150 (MQ=255) tCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGc < 1:79022/150‑1 (MQ=255) ccATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTTcc < 2:4039556/150‑1 (MQ=255) aTTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGcccc > 2:2637032/1‑150 (MQ=255) ttGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCg > 2:4544193/1‑150 (MQ=255) tGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCgg > 1:2068521/1‑150 (MQ=255) gAGCCAGTATCATACAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAAAGTCTGCCCCGGt > 2:1018918/1‑150 (MQ=255) aGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGtt > 2:1314196/1‑150 (MQ=255) aGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGtt > 2:866541/1‑150 (MQ=255) gCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGttt < 1:4339221/150‑1 (MQ=255) ccAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGtttt > 1:1561071/1‑150 (MQ=255) cAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttc > 1:2477838/1‑150 (MQ=255) gTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttcct < 2:2993800/150‑1 (MQ=255) gTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttcct > 1:618070/1‑150 (MQ=255) tATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttcctt > 1:667494/1‑150 (MQ=255) tATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttcctt > 1:3646224/1‑150 (MQ=255) aTCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttccttc > 1:1400176/1‑150 (MQ=255) cATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCa < 1:2930284/150‑1 (MQ=255) cATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCa < 1:735996/150‑1 (MQ=255) aTTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAg > 1:1965750/1‑150 (MQ=255) tCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGtt < 2:2165333/150‑1 (MQ=255) tCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGtt < 2:3757013/150‑1 (MQ=255) tCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGtt < 1:2880342/150‑1 (MQ=255) aGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCg > 1:3358685/1‑150 (MQ=255) tATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCTGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGcccc > 2:509644/1‑150 (MQ=255) tATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGcccc < 2:3709440/150‑1 (MQ=255) tAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGAc > 1:282375/1‑150 (MQ=255) tGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTa < 2:2085796/150‑1 (MQ=255) tGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTa > 2:1495819/1‑150 (MQ=255) tGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTa < 1:2592350/150‑1 (MQ=255) ttttCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCa < 2:1167423/150‑1 (MQ=255) ttCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAAGTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAgg > 2:837800/1‑150 (MQ=255) tCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAggg > 2:603187/1‑150 (MQ=255) cTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGgc > 1:4044537/1‑150 (MQ=255) cTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGgc > 2:734848/1‑150 (MQ=255) cTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGgc < 1:4292896/150‑1 (MQ=255) tAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGa > 2:3056445/1‑150 (MQ=255) cTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTa > 1:2421851/1‑150 (MQ=255) cTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTa > 1:111189/1‑150 (MQ=255) gCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTAcc > 1:12767/1‑150 (MQ=255) cTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTAccc < 2:2462764/150‑1 (MQ=255) gTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATc < 1:379631/150‑1 (MQ=255) cTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCt > 1:3830127/1‑150 (MQ=255) tGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTg < 1:188360/150‑1 (MQ=255) cGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTGAtt < 1:3925515/150‑1 (MQ=255) | CGTCTCTTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTGATTT > CP009273/4475361‑4475659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |