| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,481,791 | C→A | 7.0% | P184P (CCG→CCT) | idnT ← | L‑idonate and D‑gluconate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,481,791 | 0 | C | A | 7.0% | 1141.0 / 36.1 | 301 | P184P (CCG→CCT) | idnT | L‑idonate and D‑gluconate transporter |
| Reads supporting (aligned to +/- strand): ref base C (135/144); new base A (6/16); total (141/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.49e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 305 total aligned reads displayed.
ATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATACAACAGGGG > CP009273/4481642‑4481940 | tGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATATCTGTCg < 1:330342/150‑1 (MQ=255) tGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCg < 2:4443885/150‑1 (MQ=255) tGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCg > 2:4425451/1‑150 (MQ=255) cGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAAt > 2:297349/1‑150 (MQ=255) gggATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATg > 2:2575376/1‑150 (MQ=255) gggATCACGGCAGCGAAAAGACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATg < 2:2288731/150‑1 (MQ=255) aTCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTa < 2:74568/150‑1 (MQ=255) aTCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTa < 2:1891968/150‑1 (MQ=255) aTCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTa < 1:1972265/150‑1 (MQ=255) cGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGa > 1:1545656/1‑150 (MQ=255) ggCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGAt > 2:107821/1‑150 (MQ=255) gCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATa > 2:661057/1‑150 (MQ=255) cAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATaa > 1:1265113/1‑150 (MQ=255) aGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATaaa > 2:3826821/1‑150 (MQ=255) cGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATc > 1:3459841/1‑150 (MQ=255) gAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATcc > 2:1774109/1‑150 (MQ=255) aaaTACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCAt > 1:3064999/1‑150 (MQ=255) aaaTACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCAt > 1:360111/1‑150 (MQ=255) aaTACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTATCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATa > 1:4072822/1‑150 (MQ=255) aaTACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATa > 1:1415333/1‑150 (MQ=255) aaTACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATa < 1:2979425/150‑1 (MQ=255) aTACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATAc > 1:1297207/1‑150 (MQ=255) aCTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAg < 2:1479080/150‑1 (MQ=255) aCTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAg < 1:351859/150‑1 (MQ=255) cTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGt > 2:528840/1‑150 (MQ=255) gTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTaa < 2:3414750/150‑1 (MQ=255) aGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCg > 2:2217245/1‑150 (MQ=255) gAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGt > 2:2152176/1‑150 (MQ=255) aaGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGtt < 2:789197/150‑1 (MQ=255) aaGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTAGGAATGGTAATGATAAATCCATACAGTAAAGTCGtt < 1:2885524/150‑1 (MQ=255) ggaggGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTcc < 2:2845857/150‑1 (MQ=255) gCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGAt < 2:1997482/150‑1 (MQ=255) aTCTCCTCTTCGCTAAACAGATGAGTATTAAATAAGCCTTCCGGTGGTGCTTTATCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTa < 1:3164528/150‑1 (MQ=255) aTCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTa < 2:3513567/150‑1 (MQ=255) aTCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTa < 2:4575520/150‑1 (MQ=255) aTCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTa > 1:4470191/1‑150 (MQ=255) tcctcTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGcc < 1:4005689/150‑1 (MQ=255) cctcTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCt < 1:1456572/150‑1 (MQ=255) cctcTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCt > 1:1903382/1‑150 (MQ=255) ttCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCaaa > 2:3105477/1‑150 (MQ=255) cGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGa > 2:2726455/1‑150 (MQ=255) gCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGAt < 1:309902/150‑1 (MQ=255) cTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATa < 1:1071747/150‑1 (MQ=255) atAAAAAGATGAGGATTAAATAAGCCTTCCTGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAATACAGCGGTCCTGCGACAATAACTGTCGGAAGGGTAATGATAAATCCATTCAGTAAAGTCGTTCCGTGATTAGCCTCAAAGATa < 2:2171155/149‑1 (MQ=255) tAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAg < 1:442120/150‑1 (MQ=255) aaaCAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGt > 2:2481494/1‑150 (MQ=255) aCAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTcg < 1:1717852/150‑1 (MQ=255) aCAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTcg > 2:275365/1‑150 (MQ=255) cAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTcgc > 2:4318994/1‑150 (MQ=255) cAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTcgc > 2:3601535/1‑150 (MQ=255) gATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGa > 2:1939233/1‑150 (MQ=255) aTTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGt > 1:4030051/1‑150 (MQ=255) ttAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTa < 1:1764529/150‑1 (MQ=255) aaaTAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAgg < 1:623166/150‑1 (MQ=255) tAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGccc < 1:741993/150‑1 (MQ=255) aaGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTAGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCt < 1:2815568/150‑1 (MQ=255) aGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTg < 2:2086396/150‑1 (MQ=255) gCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTgg > 1:2449234/1‑150 (MQ=255) gCCTTCCGGTGGTGCTTTCTCAAAGAGAGTTAGCAGTTTAGAATACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTgg < 1:3232949/150‑1 (MQ=255) tCCCGTGGTGCTATCTCAAAGCGAGTTAGCAGTATAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGTTAATGAGAAATCCATACAGTAAAGTCGTACCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGAAGGCCCTGGAtga > 2:4128971/1‑149 (MQ=255) ggtggtGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTAGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTggc < 2:4011958/150‑1 (MQ=255) tggtgCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTggcgg > 1:4295730/1‑150 (MQ=255) tcAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAg > 1:707895/1‑150 (MQ=255) cAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGt < 2:1549844/150‑1 (MQ=255) aaaGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTg > 2:3674983/1‑150 (MQ=255) aaGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTgg > 1:3667579/1‑150 (MQ=255) aaGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTgg < 2:2919802/150‑1 (MQ=255) aaGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTgg < 1:4045133/150‑1 (MQ=255) aaGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAAAAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTgg > 2:3293343/1‑150 (MQ=255) aGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTAGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTggg > 1:2592969/1‑150 (MQ=255) gCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGt < 1:2230694/150‑1 (MQ=255) aGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATCACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTAc < 2:1790014/150‑1 (MQ=255) aGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTAc > 1:692974/1‑150 (MQ=255) aGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACagag > 1:1188542/1‑150 (MQ=255) aGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAgc > 1:4509805/1‑150 (MQ=255) tAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCgctg < 1:2292137/150‑1 (MQ=255) gAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCgctgct < 1:1543270/150‑1 (MQ=255) aaaCAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTAc > 2:397284/1‑150 (MQ=255) aaaCAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTAc < 2:3875834/150‑1 (MQ=255) aCAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTGGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCa < 1:1351327/150‑1 (MQ=255) aCAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCa < 1:510102/150‑1 (MQ=255) cAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCAt > 2:374901/1‑150 (MQ=255) gCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTg < 1:206450/150‑1 (MQ=255) cGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTgg > 2:4088955/1‑150 (MQ=255) cGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTgg > 2:1496589/1‑150 (MQ=255) ggTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGt > 2:4476053/1‑150 (MQ=255) tCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTAc < 2:68051/150‑1 (MQ=255) tCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTAc < 2:1577562/150‑1 (MQ=255) tCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTAc < 2:2991126/150‑1 (MQ=255) cGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCaa < 1:23454/150‑1 (MQ=255) cGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCaa > 2:1599466/1‑150 (MQ=255) cAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACAt < 2:864928/150‑1 (MQ=255) cAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACAt < 2:3452624/150‑1 (MQ=255) aaTAACTGTAGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATa > 2:1381971/1‑150 (MQ=255) aTAACTTTATGAATTGTAATGATAAATACATACAGTAAAGTAGTTCCGAGATTAGCCTCAAAGATAGTAGAGATGGCAGTAGGGCCTGGATGTGGCGGAAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATac < 1:1100689/150‑1 (MQ=255) aTAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATac < 2:3048712/150‑1 (MQ=255) aTAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATac < 1:1815891/150‑1 (MQ=255) tAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATaca < 1:2778173/150‑1 (MQ=255) tGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATACAACAg > 2:2385462/1‑150 (MQ=255) tCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATACAACAggg > 1:2949321/1‑150 (MQ=255) | ATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCAGTTTAGAAAACAGCGGTCCTGCGACAATAACTGTCGGAATGGTAATGATAAATCCATACAGTAAAGTCGTTCCGAGATTAGCCTCAAAGATAGTCGCGATGGCAGTAGGCCCTGGATGTGGCGGCAGAAAACAGTGGGTTACAGAGAGCGCTGCTACCATTGGTACGCCAACATACAACAGGGG > CP009273/4481642‑4481940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |