| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,507,551 | G→T | 6.1% | R168S (CGT→AGT) | fecI ← | RNA polymerase, sigma 19 factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,507,551 | 0 | G | T | 6.1% | 1137.7 / 29.5 | 296 | R168S (CGT→AGT) | fecI | RNA polymerase, sigma 19 factor |
| Reads supporting (aligned to +/- strand): ref base G (146/132); new base T (9/9); total (155/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 304 total aligned reads displayed.
CCTGATCCTGTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCA > CP009273/4507402‑4507700 | cctgatcctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACg < 2:2066012/150‑1 (MQ=255) tgatcctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACTGa > 2:2772152/1‑150 (MQ=255) tgatcctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGa > 2:4364612/1‑150 (MQ=255) gatcctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGACTCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGaa > 2:4484456/1‑150 (MQ=255) gatcctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGaa < 2:666082/150‑1 (MQ=255) tcctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAAca > 1:3913460/1‑150 (MQ=255) tcctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAAca > 2:89125/1‑150 (MQ=255) cctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAAcag > 2:2576627/1‑150 (MQ=255) ctgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAAcagc < 2:496054/150‑1 (MQ=255) tgTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAAcagca < 2:3957493/150‑1 (MQ=255) cATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAgcaggca > 2:2537/1‑150 (MQ=255) tACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGt < 2:599216/150‑1 (MQ=255) cTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCg < 1:2576278/150‑1 (MQ=255) tGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGa < 1:2033881/150‑1 (MQ=255) aGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCttt > 2:4048322/1‑150 (MQ=255) gcgcgcTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTc < 1:4212/150‑1 (MQ=255) gcgcgcTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTc < 1:1414790/150‑1 (MQ=255) gcgcgcTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTc < 1:4188/150‑1 (MQ=255) cgcgcgTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCg < 1:3119203/150‑1 (MQ=255) cgcgcTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCg < 1:3898545/150‑1 (MQ=255) cgcTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGcc > 1:3760084/1‑150 (MQ=255) cgtCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCAc < 1:3167159/148‑1 (MQ=255) cgtCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCAc < 1:849615/148‑1 (MQ=255) tCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGt < 2:2154149/150‑1 (MQ=255) ccTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTa > 1:4525586/1‑150 (MQ=255) tgttgtGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACTGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTAtt < 2:843562/150‑1 (MQ=255) gttgtGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTAttt < 1:2374710/150‑1 (MQ=255) gtgGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTAtttttt < 2:1448199/150‑1 (MQ=255) gtgGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTAtttttt < 2:632516/150‑1 (MQ=255) tgGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTc < 1:4326774/150‑1 (MQ=255) cgcgCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCt < 2:1514106/150‑1 (MQ=255) cgcgCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCt < 2:3174977/150‑1 (MQ=255) gcgcTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTg < 1:1219315/150‑1 (MQ=255) tCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATgg < 2:2194526/150‑1 (MQ=255) cgccgcTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGa > 2:2309963/1‑150 (MQ=255) gcctcTTAGCACGGCATACCAGTGGGAAGCTGCACGCAGCGCCTGACGGCGTGTATCGGTTAACTAAGGATTCATAACCCATACTCAAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCAAGTATTTTTTCACGGAGCTGATGGaa < 1:2215812/150‑1 (MQ=255) gccgcTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGaa > 1:1160741/1‑150 (MQ=255) gcTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAaca < 2:2470911/150‑1 (MQ=255) ttAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACAcc > 1:566923/1‑150 (MQ=255) tAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCg > 1:746069/1‑150 (MQ=255) aCGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGtt > 2:1233492/1‑150 (MQ=255) aCGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGtt > 2:1803970/1‑150 (MQ=255) ggCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTtg > 1:1743609/1‑150 (MQ=255) aTACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTgc > 2:1989942/1‑150 (MQ=255) aTACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTgc > 2:4317629/1‑150 (MQ=255) aCCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTgcgc > 1:2486973/1‑150 (MQ=255) aCCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTgcgc > 1:1172483/1‑150 (MQ=255) ccAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCa < 1:4099392/150‑1 (MQ=255) ccAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCa > 1:2798877/1‑150 (MQ=255) cAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCaa > 2:3720498/1‑150 (MQ=255) aGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAAt > 2:3892537/1‑150 (MQ=255) aGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAAt > 1:3354863/1‑150 (MQ=255) gTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAAtc > 2:4556601/1‑150 (MQ=255) gggAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAAtctc > 2:1714496/1‑150 (MQ=255) cTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTa < 1:1125222/150‑1 (MQ=255) tGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTAt < 1:3778104/150‑1 (MQ=255) gAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATg > 1:352804/1‑150 (MQ=255) gAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATg > 2:2101118/1‑150 (MQ=255) aaCGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGt < 2:1578513/150‑1 (MQ=255) aaCGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGt < 1:3057563/150‑1 (MQ=255) aCGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACTGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTc < 1:2311545/150‑1 (MQ=255) gCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAg < 1:1915552/150‑1 (MQ=255) cAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGa > 2:3402126/1‑150 (MQ=255) gcCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCAt < 1:90063/150‑1 (MQ=255) cTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATcc > 1:1633740/1‑150 (MQ=255) tGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACTGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCa > 1:3678070/1‑150 (MQ=255) tGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGGTTGTGCGCAATCTCGCTGTATGTCAGACCATCCa > 2:1089588/1‑150 (MQ=255) aCGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGt < 2:1631610/150‑1 (MQ=255) ggcggGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTg > 2:131461/1‑150 (MQ=255) ggcggGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTg > 2:28909/1‑150 (MQ=255) cggGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCg < 2:3876737/150‑1 (MQ=255) ggAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGaa > 1:540091/1‑150 (MQ=255) ggAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGaa > 2:70425/1‑150 (MQ=255) gAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGaaa > 2:4169128/1‑150 (MQ=255) gAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGaaa < 2:1901906/150‑1 (MQ=255) aTCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGc > 2:2330116/1‑150 (MQ=255) aTCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGc < 2:3913460/150‑1 (MQ=255) aTCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGc < 2:1784418/150‑1 (MQ=255) ggTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGtt > 1:2454105/1‑103 (MQ=255) ggTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGtt < 2:2454105/103‑1 (MQ=255) ttAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGaaa < 2:3738992/150‑1 (MQ=255) aCAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGc > 2:484049/1‑150 (MQ=255) cAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCt < 1:3001155/150‑1 (MQ=255) cAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCt > 2:89896/1‑150 (MQ=255) cAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCt > 2:2205892/1‑150 (MQ=255) cAAAGGATTCATAACCCATACCCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCt > 1:2239824/1‑150 (MQ=255) gATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACg < 2:1062118/150‑1 (MQ=255) ttCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACgtg > 2:45982/1‑150 (MQ=255) tCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACgtgt < 2:2708766/150‑1 (MQ=255) tAACCCATACTCCAGACTGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGtttt > 1:291171/1‑150 (MQ=255) tAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGtttt > 1:2851743/1‑150 (MQ=255) tAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGtttt > 1:2679343/1‑150 (MQ=255) aaCCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTg > 2:3772709/1‑150 (MQ=255) aaCCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTg > 2:2509743/1‑150 (MQ=255) cccATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGcc < 1:3403285/150‑1 (MQ=255) aCTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTa < 2:428429/150‑1 (MQ=255) aCTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTa < 2:3002179/150‑1 (MQ=255) aCTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTa > 1:1012550/1‑150 (MQ=255) aCTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGGTTTGCCGTTTa > 2:4147401/1‑150 (MQ=255) ggAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCa < 1:4039876/150‑1 (MQ=255) | CCTGATCCTGTTCATACCACTGTTGCCAGCGCGCTTCCTGTTGTGGGCTGACGCGCTCGCCGCTTAGCACGGCATACCAGTGGGAAGCTGAACGCAGCGCCTGACGGCGGGAATCGGTTAACAAAGGATTCATAACCCATACTCCAGACGGAACAGCAGGCAGTGCTCGACGGCTTTCGCCACGTATTTTTTCACGGAGCTGATGGAAACACCGAGTTTGTGCGCAATCTCGCTGTATGTCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCA > CP009273/4507402‑4507700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |