| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,516,177 | C→A | 42.6% | D177Y (GAT→TAT) | sgcR ← | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,516,177 | 0 | C | A | 42.6% | 290.7 / inf | 277 | D177Y (GAT→TAT) | sgcR | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (74/85); new base A (61/57); total (135/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 279 total aligned reads displayed.
TAGTGTTGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCGATTTTAA > CP009273/4516028‑4516326 | tAGTGTTGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATc > 1:1052246/1‑150 (MQ=255) gtgtTGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGc > 2:4471563/1‑150 (MQ=255) gtTGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAg > 1:2400296/1‑150 (MQ=255) ttGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAgg < 1:4213175/150‑1 (MQ=255) ttGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAgg > 2:2864483/1‑150 (MQ=255) ttGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAgg < 2:1138687/150‑1 (MQ=255) ttGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAgg > 1:967103/1‑150 (MQ=255) tGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGga < 1:3686946/150‑1 (MQ=255) tGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGga < 1:3788744/150‑1 (MQ=255) gCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGgag < 2:3530169/150‑1 (MQ=255) gCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGgag > 2:3305772/1‑150 (MQ=255) gCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGgag > 2:400774/1‑150 (MQ=255) gCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGgag < 2:5683/150‑1 (MQ=255) aCAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATa < 1:4180952/150‑1 (MQ=255) aGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATaaa > 1:6574/1‑150 (MQ=255) gCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAAc < 1:4599800/150‑1 (MQ=255) cATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACg < 2:785114/150‑1 (MQ=255) aTGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGc > 1:2713922/1‑150 (MQ=255) cGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACg > 1:3972653/1‑150 (MQ=255) cGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACg < 2:715961/150‑1 (MQ=255) ggCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGt > 1:2292154/1‑150 (MQ=255) gCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGtt < 1:3127528/150‑1 (MQ=255) aaCGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTAc < 1:3168730/150‑1 (MQ=255) aCGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACg > 1:3488586/1‑150 (MQ=255) ggCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGa > 2:3580545/1‑150 (MQ=255) gCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGaa > 1:1820380/1‑150 (MQ=255) cATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGaaa > 1:2362375/1‑150 (MQ=255) cATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGaaa > 2:3177153/1‑150 (MQ=255) aTCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGaaaa < 2:1263033/150‑1 (MQ=255) tCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAg > 2:4144101/1‑150 (MQ=255) aTTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCAt < 2:3748966/150‑1 (MQ=255) ttttGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCAtt < 2:603303/150‑1 (MQ=255) ttttGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCAtt < 1:2145979/150‑1 (MQ=255) ttttGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCAtt < 1:696837/150‑1 (MQ=255) tGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGat > 2:1316547/1‑150 (MQ=255) gAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGatc < 2:2489035/150‑1 (MQ=255) aGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATACTCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGatca < 2:3591371/150‑1 (MQ=255) aGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGatca > 1:3790742/1‑150 (MQ=255) tGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGatcatc > 1:870307/1‑150 (MQ=255) tCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACTCACGTTCTACGGAAAAGGCATTGATCATCTcc < 1:1551813/150‑1 (MQ=255) tCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTcc > 1:3853848/1‑150 (MQ=255) ggCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAg > 2:2149570/1‑150 (MQ=255) cATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAgcgc > 2:1406864/1‑150 (MQ=255) cATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGAGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAgcgc > 2:421810/1‑150 (MQ=255) aTGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGcc > 1:938736/1‑150 (MQ=255) tGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCa < 2:546112/150‑1 (MQ=255) aTAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGActc > 2:3521349/1‑150 (MQ=255) cTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACtctctc < 2:4563336/150‑1 (MQ=255) aCGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTAc < 2:4262940/150‑1 (MQ=255) gcgAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCg < 1:4170885/150‑1 (MQ=255) gcgAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCg > 2:3738690/1‑150 (MQ=255) cgAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGa > 1:3210788/1‑150 (MQ=255) cgAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGa > 1:3211304/1‑150 (MQ=255) aGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGaaa < 2:4051336/150‑1 (MQ=255) gTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAAt > 2:2659216/1‑150 (MQ=255) gTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAAt < 2:4379678/150‑1 (MQ=255) gAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAAc < 1:3591569/150‑1 (MQ=255) aatactCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAAcc < 2:4441209/150‑1 (MQ=255) ataatCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCt < 1:283916/150‑1 (MQ=255) aatCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTgg < 2:3380542/150‑1 (MQ=255) aatCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTgg > 1:1999088/1‑150 (MQ=255) ccGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCg > 2:1779569/1‑150 (MQ=255) ccGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCg < 1:1091432/150‑1 (MQ=255) gtTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATc < 1:119514/150‑1 (MQ=255) ttttCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCa < 1:163274/150‑1 (MQ=255) ccGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCg > 2:2791567/1‑150 (MQ=255) tCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATg > 2:1565367/1‑150 (MQ=255) tCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATg < 1:4196290/150‑1 (MQ=255) tCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATg < 2:763333/150‑1 (MQ=255) cAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGt > 1:3435526/1‑150 (MQ=255) aaaCATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTa > 1:130175/1‑150 (MQ=255) aaCATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTaa > 2:1470336/1‑150 (MQ=255) tggtggCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACttt < 2:393287/150‑1 (MQ=255) ggtggCATTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTc > 2:4086482/1‑150 (MQ=255) cttGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACACTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCcacagg > 1:4307387/2‑148 (MQ=255) aTTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATg < 1:1706883/150‑1 (MQ=255) aTTGGTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATg > 2:3033897/1‑150 (MQ=255) ttGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATgg < 2:1155520/150‑1 (MQ=255) tGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAGGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATggg < 1:4132938/150‑1 (MQ=255) ggTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATgggg < 2:3597426/150‑1 (MQ=255) ggTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATgggg > 2:2607965/1‑150 (MQ=255) ggTGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATgggg > 1:1364486/1‑150 (MQ=255) tGATCCCCGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGaa < 1:3420806/150‑1 (MQ=255) gATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGaaa < 2:1514027/150‑1 (MQ=255) ccccGTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACa < 2:3307765/150‑1 (MQ=255) ccGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGc < 2:1757757/150‑1 (MQ=255) gTCTCCAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGccc > 1:3059011/1‑150 (MQ=255) tctcCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCa > 1:3889929/1‑150 (MQ=255) ccAGCGACAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGtt < 2:2305991/150‑1 (MQ=255) aGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCa > 2:3977753/1‑150 (MQ=255) aGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCa < 2:1089686/150‑1 (MQ=255) gACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTg < 2:2024481/150‑1 (MQ=255) aCAGCGCATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTgg < 2:228064/150‑1 (MQ=255) aGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCg < 2:2440282/150‑1 (MQ=255) aGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCg > 1:2781626/1‑150 (MQ=255) cgcATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCGAt < 1:376981/150‑1 (MQ=255) gcATAGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCGAtt < 1:2989785/150‑1 (MQ=255) cATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCGAttt < 1:518474/150‑1 (MQ=255) aTCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCGAtttt < 2:3731201/150‑1 (MQ=255) cGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCGATTTTaa < 2:1804462/150‑1 (MQ=255) | TAGTGTTGCTACAGCATGCGGCTCAACGGCATCAAATTTTGAGTGATCGGCCATGAGAATAACTTCACGCGAGCGTTGAATAATCCGTGTTTTCACCCCGACCTCAAACATGGTGGCATTGGTGATCCCCGTCTCCAGCGACAGCGCATCGCAGGAGATAAACGCACGTTCTACGGAAAAGGCATTGATCATCTCCAGCGCCAGACTCTCTCCTACCGAAAAATAACCTGGGCGAATCAGTCCTCCGATAATGTAACTTTCCACATGGGGAAAACAGCCCAGTTCATTGGCGATTTTAA > CP009273/4516028‑4516326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |