| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 602,195 | C→A | 7.4% | T215T (ACG→ACT) | ybdK ← | weak gamma‑glutamyl:cysteine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 602,195 | 0 | C | A | 7.4% | 895.4 / 30.6 | 237 | T215T (ACG→ACT) | ybdK | weak gamma‑glutamyl:cysteine ligase |
| Reads supporting (aligned to +/- strand): ref base C (124/95); new base A (7/11); total (131/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 247 total aligned reads displayed.
GTAACCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGACGCGG > CP009273/602047‑602343 | gTAACCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGAACATCg < 2:2224605/150‑1 (MQ=255) tAACCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgt > 1:1797752/1‑150 (MQ=255) aaCCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtg > 2:3731920/1‑150 (MQ=255) ccAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtggt < 2:2947221/150‑1 (MQ=255) cAGTGGGTGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtggtg > 2:4216007/1‑150 (MQ=255) cAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtggtg < 2:3444954/150‑1 (MQ=255) aGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGgtgt < 2:1024447/150‑1 (MQ=255) gggCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGTTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAAc < 2:1748920/150‑1 (MQ=255) ggCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACt < 2:1085607/150‑1 (MQ=255) cGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCa < 2:3127013/150‑1 (MQ=255) cGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCa < 2:3127006/150‑1 (MQ=255) ggTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAg > 1:2863113/1‑150 (MQ=255) aGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACa > 1:4302625/1‑150 (MQ=255) gCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAg < 1:209011/150‑1 (MQ=255) gAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGaa > 1:2696842/1‑150 (MQ=255) aTTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAAc > 2:3360209/1‑150 (MQ=255) ttAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACa > 2:4559612/1‑150 (MQ=255) tAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAg < 1:3485355/150‑1 (MQ=255) aaTCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAgg > 2:3633019/1‑150 (MQ=255) aaTCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAAAAgg > 2:2670278/1‑150 (MQ=255) aTCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAggg < 2:1085152/150‑1 (MQ=255) tCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGc > 1:302160/1‑150 (MQ=255) tCCCGCCATATTTACTGCGTGGATAAGGGTTAACGGGGTATCCATCACCCGTTCCTCCACCGTGGCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGc < 2:3333192/150‑1 (MQ=255) ccGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCtt < 1:1147948/150‑1 (MQ=255) gCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCa > 2:1329607/1‑150 (MQ=255) ccATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCaa > 2:783999/1‑150 (MQ=255) cATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCaaa > 2:394684/1‑150 (MQ=255) cATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCaaa < 1:1516621/150‑1 (MQ=255) tatTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAAtt < 2:1236454/150‑1 (MQ=255) tatTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAAtt > 1:1007127/1‑150 (MQ=255) tatTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAAtt < 1:392524/150‑1 (MQ=255) atTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAAttg > 1:1550612/1‑150 (MQ=255) tttACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAAttgt < 2:2572948/150‑1 (MQ=255) ttACTGCGTGGCTAAGGGTTAACGGGGTATNCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAAttgtt > 1:4275163/1‑150 (MQ=255) aCTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGc < 2:2345970/150‑1 (MQ=255) aaGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGAc > 1:4060950/1‑150 (MQ=255) aaGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGAc > 1:3119911/1‑150 (MQ=255) ggTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCa > 1:3294777/1‑150 (MQ=255) ggTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCa > 1:1874286/1‑150 (MQ=255) ttAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACg < 2:2426543/150‑1 (MQ=255) ttAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACg > 2:443885/1‑150 (MQ=255) ggggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATc < 1:4428914/150‑1 (MQ=255) ggggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATc < 1:3110236/150‑1 (MQ=255) ggggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATc < 1:3070210/150‑1 (MQ=255) ggTATCCATCACCCGACCCTCCACCGTGCCACAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCgg < 1:821771/150‑1 (MQ=255) ggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCgg > 1:2503554/1‑150 (MQ=255) gTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCggg > 1:2608352/1‑150 (MQ=255) ccATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCAt < 1:2764086/150‑1 (MQ=255) aTCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTa > 1:1809161/1‑150 (MQ=255) aTCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTa > 2:896771/1‑150 (MQ=255) tCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTAt > 2:3419860/1‑150 (MQ=255) tCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTAt < 1:409615/150‑1 (MQ=255) cACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATc > 1:2312089/1‑150 (MQ=255) ccGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAgg < 1:925052/150‑1 (MQ=255) cGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGa > 1:3542374/1‑150 (MQ=255) gAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGaa > 1:464963/1‑150 (MQ=255) gAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGaa > 2:2644833/1‑150 (MQ=255) aaCCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGaaa > 2:1288177/1‑150 (MQ=255) aaCCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGaaa > 1:2563830/1‑150 (MQ=255) aCCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAg > 1:3642779/1‑150 (MQ=255) aCCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAg > 2:1534101/1‑150 (MQ=255) ccTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAgg > 2:4126389/1‑150 (MQ=255) cTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGc < 1:2657364/150‑1 (MQ=255) tCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCg > 1:3806942/1‑150 (MQ=255) cACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGa < 2:2648252/150‑1 (MQ=255) cACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGa > 2:3889317/1‑150 (MQ=255) cACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGa < 1:2410732/150‑1 (MQ=255) tGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGaaaaaa > 2:219578/1‑150 (MQ=255) aaaaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATAtt < 2:3551666/150‑1 (MQ=255) aaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCg > 1:539645/1‑150 (MQ=255) aaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCg > 2:1857347/1‑150 (MQ=255) tGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATTCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGt < 2:701686/150‑1 (MQ=255) gAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTc < 2:3402183/150‑1 (MQ=255) aCTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTga > 1:744973/1‑150 (MQ=255) aCTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTga < 2:1961301/150‑1 (MQ=255) aCTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAAAATTCGGTCGTga > 1:3234702/1‑150 (MQ=255) cTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTgag < 2:3060270/150‑1 (MQ=255) gggCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTgaggag < 2:366778/150‑1 (MQ=255) ggCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGaggagg < 1:4147791/150‑1 (MQ=255) gCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGc < 1:981926/150‑1 (MQ=255) gAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCaa > 2:1220198/1‑150 (MQ=255) aaTATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCaaa < 1:4578138/150‑1 (MQ=255) aGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTAt > 2:1439122/1‑150 (MQ=255) tGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATcc > 2:1817053/1‑150 (MQ=255) tGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATcc < 2:3813416/150‑1 (MQ=255) cAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGt < 2:2792702/150‑1 (MQ=255) cAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGt > 1:4216228/1‑150 (MQ=255) aGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGACACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGtt > 1:275564/1‑150 (MQ=255) aGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGtt < 1:3159272/150‑1 (MQ=255) cTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCt < 2:4507914/150‑1 (MQ=255) cTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCatatat < 2:3739058/150‑1 (MQ=255) tGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATg < 1:860644/150‑1 (MQ=255) gTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATgg < 1:116781/150‑1 (MQ=255) tCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACAGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGc > 2:4278278/1‑150 (MQ=255) cGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCg > 2:4174899/1‑150 (MQ=255) gATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGa > 2:882863/1‑150 (MQ=255) atcatcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAc < 2:4603039/150‑1 (MQ=255) catcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAcgc > 1:666091/1‑150 (MQ=255) atcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAcgcg < 2:1133220/150‑1 (MQ=255) tcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGACgcgg < 1:3514277/150‑1 (MQ=255) | GTAACCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGACGCGG > CP009273/602047‑602343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |