| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,841 | A→T | 8.7% | intergenic (‑112/+22) | yceB ← / ← grxB | lipoprotein, DUF1439 family/glutaredoxin 2 (Grx2) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,841 | 0 | A | T | 8.7% | 905.7 / 57.9 | 284 | intergenic (‑112/+22) | yceB/grxB | lipoprotein, DUF1439 family/glutaredoxin 2 (Grx2) |
| Reads supporting (aligned to +/- strand): ref base A (120/139); new base T (15/10); total (135/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 285 total aligned reads displayed.
CTGACGATCAATGCAGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGC > CP009273/1118692‑1118989 | tactataaaTGCTGCGGCAAATAAAAACTTGTTCTTGGTAGTCATCTAAATGAAATCTGCTTCAATATCCT‑TCACAAACGCAGCATGTTTCACCTGCTATAAACTCGCCAGCATAAAAAACTGAAAACGGCGGCAACCCGCGAATACAgg < 1:4130548/143‑1 (MQ=255) gATCAATGCAGCGGCAAATAAAATCTTGTTCATGGTAGTCCTCGACTTGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAATACTGAAAACGGCGGCAACACGCGAATACAGGCTg > 2:293482/1‑150 (MQ=255) gATCAATGCAGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTg > 1:1457398/1‑150 (MQ=255) aTCAATGCAGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACTGGCTGc > 2:4018112/1‑150 (MQ=255) aTCAATGCAGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGc > 2:172655/1‑150 (MQ=255) tCAATGCAGCGGAAAATAAAAACTTGTTCATGGTAGTCCTCTACATTAAATCTGCGTCAATATCCTCACAA‑AACGCTGCTTGTGTCACCCGCTATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGcc < 1:2393685/150‑1 (MQ=255) cAGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCgcggcg > 1:2848917/1‑150 (MQ=255) cAGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCgcggcg > 1:3273585/1‑150 (MQ=255) aGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGcggcgg > 2:1014461/1‑150 (MQ=255) gCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑ACCGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAACACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCggg < 2:1018735/150‑1 (MQ=255) gCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCa > 1:4053277/1‑150 (MQ=255) gCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCa > 1:4536094/1‑150 (MQ=255) cAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACTGGCTGCCGCGGCGGGTCAg < 2:4156785/150‑1 (MQ=255) aaaTAAAAACTTGTTCTTGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCCGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAgg < 1:1309246/150‑1 (MQ=255) aaaTAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAgg > 2:3775800/1‑150 (MQ=255) aTAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTAAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGAt < 2:185165/150‑1 (MQ=255) aaaaaCTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTa < 2:3039003/150‑1 (MQ=255) aaaaaCTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGGGTCACCCGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTa < 2:82838/150‑1 (MQ=255) atcTTGTTCATGGTAGTCCCCTAAATTAAATCTGCGTCAATATCCTGACAC‑AACGCAGCTTGTGACACCCTCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAAt < 1:316759/148‑1 (MQ=255) aattttttCATGGTTGTCCTCCAAATTAAATCTGCGTCAATATCCTGACAC‑AACGCAGCTTGTGTCACCCGCTATAAACTCGCCAGAATAAAAAACTTAACACGGCGGCAACCCGCGAATACTGGCTGCCGCGGCGGGTCAGGATTAAAt < 1:481775/144‑1 (MQ=255) aaCTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAAt > 1:922322/1‑150 (MQ=255) cTTGTTCATGGTATTCCTCTAATTGAAATCTGCGTCAATATCCTTACAA‑AACGCAGCATGTGTAACCAGCTATAAACTCGCCTGCAGAAAAAACTTAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCg < 1:2255983/150‑1 (MQ=255) cTTGTTCAGGGTATGCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑ACCGCAGAATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCg < 2:1357489/150‑1 (MQ=255) gtttCATGGTAGTCATCGACATTAAATCTGCTACAATATCCTTACAC‑AACGCCGAATTTTTAACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGcc < 2:1171246/148‑1 (MQ=255) gTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGAAAAACTCGCCAGCAGAAAAAACTGAACACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCa < 1:2149970/150‑1 (MQ=255) tCATGGTAGTCCTCTACATTAAATCTGCGTCAATATCCTGACAA‑ACCGCAGCTTGTGTCACCAGCGATAACATCGCCAGCTGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCAtt < 1:2288790/150‑1 (MQ=255) aTGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATtga < 1:41917/150‑1 (MQ=255) ggTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCCGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATtgatg < 2:1939713/150‑1 (MQ=255) ggTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATtgatg < 2:1465995/150‑1 (MQ=255) gTAGTCCTCGACATTAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATAAAATCGCCATtgatga < 1:264948/150‑1 (MQ=255) ttgTCCTCGACATGAAATCTGCGTCAATATCCTTACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTgatgat < 2:123718/148‑1 (MQ=255) tAGTCCTCGACATTAAATCTGCGTCAATCTCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACTGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTgatgat < 2:428070/150‑1 (MQ=255) aaGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACAGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATAGCCATTgatgat > 2:2741593/2‑150 (MQ=255) aGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACTGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATa > 1:3702672/1‑150 (MQ=255) aGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACTGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATa > 2:3575673/1‑150 (MQ=255) aGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATa < 2:1335882/150‑1 (MQ=255) gTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATaa < 2:3400158/150‑1 (MQ=255) gTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATaa > 1:1149187/1‑150 (MQ=255) tCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACTGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAAc < 2:4495330/150‑1 (MQ=255) tCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAAc > 2:3883233/1‑150 (MQ=255) cTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACaa < 1:3069173/150‑1 (MQ=255) gACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAAtt > 2:3211675/1‑150 (MQ=255) cATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGa > 1:3193821/1‑150 (MQ=255) aTGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAAGTGAt > 2:466893/1‑150 (MQ=255) caaaTCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACACGCCAGCAGAAAAAACTGAACACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGAttt < 1:2504033/149‑1 (MQ=255) aTCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTtgtg > 2:924657/1‑150 (MQ=255) aTCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTtgtg > 2:2205216/1‑150 (MQ=255) tGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCt < 2:3716081/150‑1 (MQ=255) cAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTc < 2:1863096/150‑1 (MQ=255) atCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCa > 1:733496/1‑150 (MQ=255) ccTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCata < 2:4194526/150‑1 (MQ=255) ccTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCata > 1:1491475/1‑150 (MQ=255) ccTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCata > 2:2229502/1‑150 (MQ=255) cTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCatat < 2:3470888/150‑1 (MQ=255) acac‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCAtattat > 2:3802916/1‑150 (MQ=255) cac‑aACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAACACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATc < 2:2071369/150‑1 (MQ=255) ac‑aACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATcg < 2:3276793/150‑1 (MQ=255) c‑aACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATcgc < 2:2957835/150‑1 (MQ=255) gcagcaTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTa < 1:649921/150‑1 (MQ=255) agcaTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAAt > 2:2271909/1‑150 (MQ=255) caTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACTGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCa < 2:3440323/150‑1 (MQ=255) aTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAg > 2:456846/1‑150 (MQ=255) aTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAg < 2:2555620/150‑1 (MQ=255) tgtgTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGc < 2:4595073/150‑1 (MQ=255) tgtgTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGc < 2:3843726/150‑1 (MQ=255) gtgtCACCCGCTATAACCTCGCCAGCATAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCa < 1:659606/150‑1 (MQ=255) gtgtCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCa < 2:4413119/150‑1 (MQ=255) gtgtCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCa < 2:335791/150‑1 (MQ=255) tCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAAcg < 2:4462918/150‑1 (MQ=255) tCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAAcg < 2:227641/150‑1 (MQ=255) aCCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAAcgcg < 1:3635638/150‑1 (MQ=255) gATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTgg > 2:2679377/1‑150 (MQ=255) aaccTCGCCAGCAGAAAAAACTGAACACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCa < 2:712876/147‑1 (MQ=255) cTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGtt < 1:3053485/150‑1 (MQ=255) tCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTa > 2:1382208/1‑150 (MQ=255) tCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTa > 1:3521161/1‑150 (MQ=255) ccAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAAtt < 1:3458158/150‑1 (MQ=255) cagAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCgg > 2:3405951/1‑150 (MQ=255) agAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGc < 1:1636246/150‑1 (MQ=255) aaaCTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCa > 1:850900/1‑150 (MQ=255) aaaCTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCa > 1:2101439/1‑150 (MQ=255) aaCTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAg < 2:2754443/150‑1 (MQ=255) aaaaCGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCa < 2:1659986/150‑1 (MQ=255) aaaCGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAg < 2:23980/150‑1 (MQ=255) aaaCGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAg > 2:2512330/1‑150 (MQ=255) aaaCGGCGGCAACCCGCGAATACAGGCTACCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAg > 1:2528321/1‑150 (MQ=255) aCGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGAt < 1:3802916/150‑1 (MQ=255) cggcggCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGAtt < 1:1903639/150‑1 (MQ=255) cggcggCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATAAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGAtt < 1:3349859/150‑1 (MQ=255) ggcggcAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTa > 1:3980290/1‑150 (MQ=255) cggcAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACg < 1:1868155/150‑1 (MQ=255) cAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAg > 1:1981275/1‑150 (MQ=255) cAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAg < 2:4342344/150‑1 (MQ=255) cccGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAg < 2:579504/150‑1 (MQ=255) cccGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAg > 2:210287/1‑150 (MQ=255) cgcgAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCg < 1:441772/150‑1 (MQ=255) cgAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCggg > 2:4090096/1‑150 (MQ=255) cgAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCggg < 1:1707397/150‑1 (MQ=255) gAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGa > 1:1076850/1‑150 (MQ=255) aTACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAAt < 1:1681482/150‑1 (MQ=255) | CTGACGATCAATGCAGCGGCAAATAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACAC‑AACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGC > CP009273/1118692‑1118989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |