| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,284,124 | C→A | 22.0% | intergenic (‑44/+6) | purU ← / ← ychJ | formyltetrahydrofolate hydrolase/UPF0225 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,284,124 | 0 | C | A | 22.0% | 678.2 / 142.5 | 254 | intergenic (‑44/+6) | purU/ychJ | formyltetrahydrofolate hydrolase/UPF0225 family protein |
| Reads supporting (aligned to +/- strand): ref base C (100/98); new base A (21/35); total (121/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.66e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01 | |||||||||||
Only 100 of 260 total aligned reads displayed.
GTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCACCTG > CP009273/1283975‑1284272 | gTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTc > 1:3881700/1‑150 (MQ=255)gTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTc > 1:358717/1‑150 (MQ=255)gTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTc < 1:1276393/150‑1 (MQ=255) gATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAAcc > 1:3170556/1‑150 (MQ=255) ttAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCattat < 2:330415/150‑1 (MQ=255) tAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCattatt < 1:2367820/150‑1 (MQ=255) aaCTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTg < 1:405843/150‑1 (MQ=255) tCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGcc < 1:2183185/150‑1 (MQ=255) cGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCg < 2:1042272/150‑1 (MQ=255) ttGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCgcagca < 1:1759568/150‑1 (MQ=255) aGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACttt < 1:3415417/150‑1 (MQ=255) cAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACttttt < 1:3669692/150‑1 (MQ=255) aaaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTa > 2:1710201/1‑150 (MQ=255) aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTaa > 2:3133631/1‑150 (MQ=255) aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTaa < 2:4267886/150‑1 (MQ=255) aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTaa > 1:385651/1‑150 (MQ=255) aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTaa > 1:4350177/1‑150 (MQ=255) atatTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTaaa > 2:135956/1‑150 (MQ=255) tatTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAt < 2:4034106/150‑1 (MQ=255) tatTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAt > 1:4303375/1‑150 (MQ=255) atTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtt > 1:2017505/1‑150 (MQ=255) atTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtt > 2:3042457/1‑150 (MQ=255) atTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtt > 2:2105759/1‑150 (MQ=255) tGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtttt < 1:541518/150‑1 (MQ=255) tAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTa > 2:2041889/1‑150 (MQ=255) aTACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTAcc < 1:1023854/150‑1 (MQ=255) tACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCt > 2:2242006/1‑150 (MQ=255) cGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGa < 1:4600340/150‑1 (MQ=255) cGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGa > 1:1604678/1‑150 (MQ=255) tGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAAc < 2:3245577/150‑1 (MQ=255) gATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACcac > 1:2756298/1‑150 (MQ=255) gATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACcac < 1:2537962/150‑1 (MQ=255) gATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACcac > 1:3579923/1‑150 (MQ=255) tCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACaa < 2:2898759/150‑1 (MQ=255) aCCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGc < 2:3000089/150‑1 (MQ=255) ccTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCa > 1:1477515/1‑150 (MQ=255) ccTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCa < 1:3549991/150‑1 (MQ=255) ccTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCa > 1:1146676/1‑150 (MQ=255) tttGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGa < 2:2809689/150‑1 (MQ=255) tGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATc > 1:2922057/1‑150 (MQ=255) gTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGt > 2:2032900/1‑150 (MQ=255) gTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGt > 2:3147221/1‑150 (MQ=255) tCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGtt > 2:4505039/1‑150 (MQ=255) ccGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTg < 2:2512090/150‑1 (MQ=255) cGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGc < 2:7662/150‑1 (MQ=255) ggACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCg > 2:62128/1‑150 (MQ=255) ggACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCg < 2:3234186/150‑1 (MQ=255) cAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGAcc > 2:2207982/1‑150 (MQ=255) tAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAAc > 2:1287395/1‑150 (MQ=255) tAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAAc > 2:3438133/1‑150 (MQ=255) gCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGa > 2:3795966/1‑150 (MQ=255) cAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGAc > 1:3965909/1‑150 (MQ=255) gAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACgt < 1:3051353/150‑1 (MQ=255) aCTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACgtgt < 2:2255077/150‑1 (MQ=255) cTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTa < 2:82455/150‑1 (MQ=255) tttACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCCTTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCTGACGTGTAc > 2:1617541/1‑150 (MQ=255) tttACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTAc > 1:319447/1‑150 (MQ=255) aCGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGt < 1:1184033/150‑1 (MQ=255) gTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCa > 1:3550187/1‑150 (MQ=255) gTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCa > 1:1816722/1‑150 (MQ=255) gTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCa > 1:3632515/1‑150 (MQ=255) tGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAat > 2:1978205/1‑150 (MQ=255) ggAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAata < 1:788591/150‑1 (MQ=255) gAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAatat < 1:1875736/150‑1 (MQ=255) gTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAg > 2:2943385/1‑150 (MQ=255) tGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGt > 1:1545604/1‑150 (MQ=255) tGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGt < 2:4185588/150‑1 (MQ=255) cATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCAtt < 2:4571659/150‑1 (MQ=255) cATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCAtt > 1:2575169/1‑150 (MQ=255) aTTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTg < 2:855074/150‑1 (MQ=255) aTTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGACGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTg < 2:4567961/150‑1 (MQ=255) gCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGAcc > 2:434222/1‑150 (MQ=255) cTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCg < 1:1279197/150‑1 (MQ=255) cTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCg < 2:3072971/150‑1 (MQ=255) tGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGt > 1:1073928/1‑150 (MQ=255) ggAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGtt < 2:2717716/150‑1 (MQ=255) gAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGttt > 2:2624862/1‑150 (MQ=255) gAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGttt < 2:3534534/150‑1 (MQ=255) aaaaaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGtttt < 1:4516075/150‑1 (MQ=255) aaaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTtttct < 2:2464035/150‑1 (MQ=255) aaaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCGATATAGTACCATTGACCGTtttct > 1:2381880/1‑150 (MQ=255) aaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTtttctt > 2:1135920/1‑150 (MQ=255) cTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCa < 1:4564929/150‑1 (MQ=255) tgAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAAt > 1:3972561/1‑150 (MQ=255) gagaGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCAATTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATc < 2:2299483/150‑1 (MQ=255) agagTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcg > 1:1718057/1‑150 (MQ=255) agagTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcg < 1:414026/150‑1 (MQ=255) agagTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcg < 2:1106167/150‑1 (MQ=255) agTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcgcg > 1:894678/1‑150 (MQ=255) gtTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAAc < 1:958281/150‑1 (MQ=255) gtTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAAc < 1:2423032/150‑1 (MQ=255) tttGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACg < 2:2632578/150‑1 (MQ=255) aaCCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAatt < 1:410663/150‑1 (MQ=255) accgtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAatta < 2:4533084/150‑1 (MQ=255) accgtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCAATGACCGTTTTCTTTCAAAAATCGCGAACGATCAatta > 1:3828779/1‑150 (MQ=255) cgtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAattatt < 1:4512922/150‑1 (MQ=255) gtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTg > 2:1716370/1‑150 (MQ=255) gtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTg > 1:1581246/1‑150 (MQ=255) cgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCAcc < 2:2382816/150‑1 (MQ=255) cgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCAcc < 1:1271580/150‑1 (MQ=255) | GTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCACCTG > CP009273/1283975‑1284272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |