| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,372,069 | G→T | 45.9% | E327D (GAG→GAT) | ycjS → | putative NADH‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,372,069 | 0 | G | T | 45.9% | 232.9 / inf | 300 | E327D (GAG→GAT) | ycjS | putative NADH‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (87/75); new base T (75/63); total (162/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 301 total aligned reads displayed.
TGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAG > CP009273/1371921‑1372218 | tGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGc > 2:2970810/1‑150 (MQ=255) tCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAggg < 1:834/150‑1 (MQ=255) cAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGt < 1:706861/150‑1 (MQ=255) aGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTa < 1:815809/150‑1 (MQ=255) gCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTAc < 2:588473/150‑1 (MQ=255) gCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTAc > 1:2817300/1‑150 (MQ=255) acaTATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTAcat > 2:2114737/1‑150 (MQ=255) tatCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTAcatcat > 2:3246824/1‑150 (MQ=255) tACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAg > 2:1291542/1‑150 (MQ=255) tACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAg < 2:1748607/150‑1 (MQ=255) tACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAg > 2:2473194/1‑150 (MQ=255) cacCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCa < 1:2725998/150‑1 (MQ=255) acCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCaa > 1:2238311/1‑150 (MQ=255) cGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACt > 1:3577059/1‑150 (MQ=255) gATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtg > 1:1895775/1‑150 (MQ=255) gATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACtg < 2:3903387/150‑1 (MQ=255) aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg < 1:1978000/150‑1 (MQ=255) aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg > 2:1623124/1‑150 (MQ=255) aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg > 1:2772662/1‑150 (MQ=255) aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg > 2:3866460/1‑150 (MQ=255) tAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtggt > 1:2144634/1‑150 (MQ=255) tAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACtggt > 1:153168/1‑150 (MQ=255) aacaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACtggtg > 1:1795442/1‑150 (MQ=255) aacaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACtggtg < 1:1697342/150‑1 (MQ=255) caacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTggc > 1:3648636/1‑150 (MQ=255) cGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTggcggc > 2:4331591/1‑150 (MQ=255) gTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGt < 1:3126044/150‑1 (MQ=255) tAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATc > 1:4538777/1‑150 (MQ=255) aaTGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCa > 1:3694481/1‑150 (MQ=255) aaTGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCa > 2:685492/1‑150 (MQ=255) aTGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCaa < 1:4344521/150‑1 (MQ=255) gACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATc < 1:2777669/150‑1 (MQ=255) cGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCg < 2:4274954/150‑1 (MQ=255) tGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGNTACATCATCNAGCAACTGNTGGCGGCGTTGTATCAANCCGCAg > 1:4154823/1‑150 (MQ=255) gCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAAc < 2:3359118/150‑1 (MQ=255) gggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGa < 1:3301988/150‑1 (MQ=255) ggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAc > 1:1033364/1‑150 (MQ=255) cAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTgg < 1:2212587/150‑1 (MQ=255) cAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTgg < 1:2346698/150‑1 (MQ=255) aGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGa > 2:3132600/1‑150 (MQ=255) gacgacAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGaa > 2:2511258/1‑150 (MQ=255) gacgacAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGaa > 2:200357/1‑150 (MQ=255) cgacAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAAtt < 1:4398009/150‑1 (MQ=255) cgacAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAAtt < 1:473222/150‑1 (MQ=255) cgacAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAAtt > 2:1817101/1‑150 (MQ=255) gacAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTa > 2:915711/1‑150 (MQ=255) ccGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGAcc < 2:4421274/150‑1 (MQ=255) cGCCATTTGCGCAGCATGGAAGCTTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCa > 2:4221062/1‑150 (MQ=255) cGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCa > 1:525476/1‑150 (MQ=255) ccATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAgg > 2:3578959/1‑150 (MQ=255) ccATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAgg > 2:3063511/1‑150 (MQ=255) cgcAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTaa < 2:4041602/150‑1 (MQ=255) gcagcaTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAAc < 1:1028326/150‑1 (MQ=255) cagcaTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACg > 2:3728177/1‑150 (MQ=255) aTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTAt > 1:3958549/1‑150 (MQ=255) aTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTAt > 2:938185/1‑150 (MQ=255) aTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTAt > 1:2198947/1‑150 (MQ=255) aTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGAAGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGACTTATGACCAGGCCAGTAACGTTAt > 2:3485158/1‑150 (MQ=255) ggAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCa > 1:4321563/1‑150 (MQ=255) ggAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCa < 2:1458051/150‑1 (MQ=255) ccTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAcc < 1:1475490/150‑1 (MQ=255) cTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAccc > 2:2269661/1‑150 (MQ=255) tttATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAcccc > 1:1153606/1‑150 (MQ=255) tATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCAt < 2:3626280/150‑1 (MQ=255) caatcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTc > 1:2538969/1‑150 (MQ=255) aatcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTca < 1:2565901/150‑1 (MQ=255) atcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcag < 1:3638299/150‑1 (MQ=255) caCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagcc < 1:3143512/150‑1 (MQ=255) aCAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCAt > 1:2619461/1‑150 (MQ=255) cAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATa < 2:1246334/150‑1 (MQ=255) cAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATa < 1:562767/150‑1 (MQ=255) aGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATAc < 2:2370859/150‑1 (MQ=255) gCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCt < 2:4538829/150‑1 (MQ=255) gCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCt < 2:1032217/150‑1 (MQ=255) cAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTg > 1:3660029/1‑150 (MQ=255) cAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTg < 1:4475653/150‑1 (MQ=255) cccGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCAGAACa > 1:2049345/1‑150 (MQ=255) ccGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGACTTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACaa > 2:132899/1‑150 (MQ=255) ccGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACaa > 2:4464517/1‑150 (MQ=255) cGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAg > 2:2362543/1‑150 (MQ=255) cGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGAAACAGGTTGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGTATTATGACCAGGCCAGTACCGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAg > 2:3021782/1‑150 (MQ=255) gatgatAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTAt > 2:2817259/1‑150 (MQ=255) atgatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATg < 2:1202840/150‑1 (MQ=255) tgatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGc < 2:1005197/150‑1 (MQ=255) tgatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTAAACAAGTATga > 2:4094300/1‑149 (MQ=255) aGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCg < 2:1407467/150‑1 (MQ=255) aGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATAATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCg > 1:3225801/1‑150 (MQ=255) aGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCg < 2:1479747/150‑1 (MQ=255) ccGACGCCGATCTGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGTAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCt < 1:186502/150‑1 (MQ=255) cGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTg < 1:745747/150‑1 (MQ=255) cGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTg < 1:3463176/150‑1 (MQ=255) cGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTg < 1:3801570/150‑1 (MQ=255) aCGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGAt > 1:3433600/1‑150 (MQ=255) aCGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGAt < 1:919673/150‑1 (MQ=255) cGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATg > 2:3281908/1‑150 (MQ=255) cGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATg < 1:2970810/150‑1 (MQ=255) gCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATgg < 1:3014796/150‑1 (MQ=255) gCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATgg < 2:2927307/150‑1 (MQ=255) cGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGgcg > 2:2434193/1‑150 (MQ=255) aGCAGGGGTACATCATCCAGCTACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGCCGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCa > 2:261577/1‑150 (MQ=255) | TGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAG > CP009273/1371921‑1372218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |