Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,576,844 G→A 54.1% intergenic (‑63/+339) ydeN ← / ← ydeO putative Ser‑type periplasmic non‑aryl sulfatase/UV‑inducible global regulator, EvgA‑, GadE‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,576,8440GA54.1% 51.6 / inf 270intergenic (‑63/+339)ydeN/ydeOputative Ser‑type periplasmic non‑aryl sulfatase/UV‑inducible global regulator, EvgA‑, GadE‑dependent
Reads supporting (aligned to +/- strand):  ref base G (61/63);  new base A (77/69);  total (138/132)
Fisher's exact test for biased strand distribution p-value = 6.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 276 total aligned reads displayed.

CGCATGAGCAGCAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCA  >  CP009273/1576695‑1576992
                                                                                                                                                     |                                                                                                                                                    
cGCATGAGCAGCAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATg                                                                                                                                                      <  1:4227272/150‑1 (MQ=255)
   aTGAGCAGCAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATaa                                                                                                                                                   <  2:2941603/150‑1 (MQ=255)
    tGAGCAGCAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAg                                                                                                                                                  >  1:3734021/1‑150 (MQ=255)
     gAGCAGCAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGt                                                                                                                                                 >  2:3882819/1‑150 (MQ=255)
      agcagcAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTg                                                                                                                                                >  1:743130/1‑150 (MQ=255)
      agcagcAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTg                                                                                                                                                <  1:4477332/150‑1 (MQ=255)
        cagcaAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGaa                                                                                                                                              <  2:3949985/150‑1 (MQ=255)
         agcaAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAg                                                                                                                                             >  1:4608831/1‑150 (MQ=255)
         agcaAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAg                                                                                                                                             <  2:2052342/150‑1 (MQ=255)
          gcaAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGt                                                                                                                                            >  1:2314341/1‑150 (MQ=255)
           caAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGtt                                                                                                                                           <  1:548109/150‑1 (MQ=255)
           caAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGtt                                                                                                                                           <  1:2961286/150‑1 (MQ=255)
              aTGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGt                                                                                                                                        <  2:2539483/150‑1 (MQ=255)
               tGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTc                                                                                                                                       <  1:895038/150‑1 (MQ=255)
                    ccATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAACTAAGTGGATATAAGTGAAGTTAGTCACATa                                                                                                                                  >  2:307376/1‑150 (MQ=255)
                      aTACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATaaa                                                                                                                                >  2:835651/1‑150 (MQ=255)
                      aTACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATaaa                                                                                                                                <  1:393940/150‑1 (MQ=255)
                           aGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGAt                                                                                                                           >  2:3786780/1‑150 (MQ=255)
                           aGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGAt                                                                                                                           <  1:3098047/150‑1 (MQ=255)
                               gCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCa                                                                                                                       <  1:1171207/150‑1 (MQ=255)
                               gCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCa                                                                                                                       <  1:3549874/150‑1 (MQ=255)
                               gCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCa                                                                                                                       >  1:2453301/1‑150 (MQ=255)
                               gCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCa                                                                                                                       <  2:1237954/150‑1 (MQ=255)
                                  aGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGAt                                                                                                                    >  2:147557/1‑150 (MQ=255)
                                   gTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGAtt                                                                                                                   <  1:3168230/150‑1 (MQ=255)
                                    tATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGAttt                                                                                                                  <  2:611497/150‑1 (MQ=255)
                                     aTCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTa                                                                                                                 >  2:1357730/1‑150 (MQ=255)
                                       cAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGc                                                                                                               >  1:2111878/1‑150 (MQ=255)
                                       cAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGc                                                                                                               <  1:2735675/150‑1 (MQ=255)
                                        aaaGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCt                                                                                                              >  2:1225936/1‑150 (MQ=255)
                                        aaaGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCt                                                                                                              <  1:1825428/150‑1 (MQ=255)
                                           gATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTaaa                                                                                                           <  2:1051326/150‑1 (MQ=255)
                                             tatCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTaaaaa                                                                                                         <  1:1962434/150‑1 (MQ=255)
                                              atCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTaaaaaa                                                                                                        <  2:4144811/150‑1 (MQ=255)
                                                 gAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAgg                                                                                                     >  2:2570942/1‑150 (MQ=255)
                                                      aCTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGaaaa                                                                                                <  1:1365771/150‑1 (MQ=255)
                                                      aCTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGaaaa                                                                                                <  1:3251661/150‑1 (MQ=255)
                                                       cTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGaaaaa                                                                                               >  1:1795969/1‑150 (MQ=255)
                                                        ttACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGaaaaaa                                                                                              >  2:3699110/1‑150 (MQ=255)
                                                         tACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAAc                                                                                             <  1:1050946/150‑1 (MQ=255)
                                                           cGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGACAAAACAg                                                                                           >  2:3770941/1‑150 (MQ=255)
                                                              cacTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTcc                                                                                        <  1:3899378/150‑1 (MQ=255)
                                                               acTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCa                                                                                       <  2:750978/150‑1 (MQ=255)
                                                               acTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCa                                                                                       <  2:1275073/150‑1 (MQ=255)
                                                                cTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCAt                                                                                      <  2:973016/150‑1 (MQ=255)
                                                                    tCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAg                                                                                  <  1:2070791/150‑1 (MQ=255)
                                                                             cAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACaa                                                                         >  2:433588/1‑149 (MQ=255)
                                                                             cAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACAt                                                                         >  2:3618313/1‑150 (MQ=255)
                                                                             cAGACTTAATAAATGTTCCTCTTCTTATTGTAATTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACAt                                                                         <  1:2629849/150‑1 (MQ=255)
                                                                              aGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACAtt                                                                        >  2:220802/1‑150 (MQ=255)
                                                                               gACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTa                                                                       <  2:2114320/150‑1 (MQ=255)
                                                                               gACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTa                                                                       >  1:1419869/1‑150 (MQ=255)
                                                                                aCTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTAc                                                                      >  1:2347550/1‑150 (MQ=255)
                                                                                aCTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTAc                                                                      >  1:4185249/1‑150 (MQ=255)
                                                                                 cTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACt                                                                     >  1:616237/1‑150 (MQ=255)
                                                                                   tCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACttt                                                                   <  2:2758814/150‑1 (MQ=255)
                                                                                   tCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACttt                                                                   <  2:2758798/150‑1 (MQ=255)
                                                                                      tAAATGGTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTg                                                                <  1:2557784/150‑1 (MQ=255)
                                                                                        aaTGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGtt                                                              >  1:2214119/1‑150 (MQ=255)
                                                                                        aaTGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGtt                                                              >  1:2953577/1‑150 (MQ=255)
                                                                                         aTGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTc                                                             >  2:3212432/1‑150 (MQ=255)
                                                                                         aTGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTc                                                             >  1:425907/1‑150 (MQ=255)
                                                                                           gTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTa                                                           >  2:4411568/1‑150 (MQ=255)
                                                                                           gTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTa                                                           <  1:3230244/150‑1 (MQ=255)
                                                                                            ttCCTCTTCTTATTTTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTACATAAAGCGTTGACATTACTTTCTGTTCTAt                                                          <  1:1079746/150‑1 (MQ=255)
                                                                                             tCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTAtt                                                         <  2:45597/150‑1 (MQ=255)
                                                                                               ctctTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTaa                                                       >  2:1388838/1‑150 (MQ=255)
                                                                                                  ttcttATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTGCTATTAAGTa                                                    >  2:4220664/1‑150 (MQ=255)
                                                                                                         tGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTtctc                                             >  2:685016/1‑150 (MQ=255)
                                                                                                            aCTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGcc                                          >  2:1578359/1‑150 (MQ=255)
                                                                                                            aCTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGcc                                          >  2:4579892/1‑150 (MQ=255)
                                                                                                             cTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCg                                         <  2:3026542/150‑1 (MQ=255)
                                                                                                                 aTTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATaa                                     >  2:2405142/1‑150 (MQ=255)
                                                                                                                    ccAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaaca                                  <  1:1869216/150‑1 (MQ=255)
                                                                                                                     cAAAGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaacaa                                 >  1:1493553/1‑150 (MQ=255)
                                                                                                                      aaaGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaacaac                                >  1:2674890/1‑150 (MQ=255)
                                                                                                                       aaGTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACt                               >  1:1707409/1‑150 (MQ=255)
                                                                                                                         gTAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTaa                             <  2:349201/150‑1 (MQ=255)
                                                                                                                          tAATTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAAt                            >  1:366067/1‑150 (MQ=255)
                                                                                                                           aaTTTTACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAAtt                           >  1:1806518/1‑150 (MQ=255)
                                                                                                                            aTTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAAgtt                          <  2:4215142/150‑1 (MQ=255)
                                                                                                                            aTTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTACTCGCCGATAAACAACTAAttt                          >  2:1834705/1‑150 (MQ=255)
                                                                                                                              ttttCGAAGAGTAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAt                        <  1:3639415/150‑1 (MQ=255)
                                                                                                                              tttACGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAt                        <  1:232614/150‑1 (MQ=255)
                                                                                                                               ttACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAtt                       >  2:3242946/1‑150 (MQ=255)
                                                                                                                               ttACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAtt                       <  2:1501089/150‑1 (MQ=255)
                                                                                                                               ttACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAtt                       >  2:1590533/1‑150 (MQ=255)
                                                                                                                                  cGAAGAGAAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGat                    >  1:3965986/1‑150 (MQ=255)
                                                                                                                                   gAAGAGAAATAAGTTGATGTAAGTGAAGTTAGTCACAAAAAGAGATAGAAGATTTAGATAAAAAAATTTAAAAAACATTCCATAAATCGTTGACATTACGTTCTGTTCTATTAATTAATTTCTCGCCGATAAACAACTAAAATATTGata                   >  2:3590928/1‑150 (MQ=255)
                                                                                                                                     agagAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATAtt                 >  2:3756237/1‑150 (MQ=255)
                                                                                                                                     agagAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATAtt                 <  1:3377876/150‑1 (MQ=255)
                                                                                                                                      gagaAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATAttt                <  2:4266461/150‑1 (MQ=255)
                                                                                                                                      gagaAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATAttt                >  1:777362/1‑150 (MQ=255)
                                                                                                                                       agaAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTta               >  2:1968259/1‑150 (MQ=255)
                                                                                                                                       agaAATAAGTGCAAATAAGTGAAGTTAGTCACATAAAGAGATAGCATATTTAGCTATAAAAAGGTAAAAAACAGTCCATAAAGAGTTGAAATAACTTTCTGTTCTATTAATTAATTTCTCGCCGATAAACAACTAATTTATTGATATTta               >  2:2612834/1‑150 (MQ=255)
                                                                                                                                        gaAATAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTtaa              >  2:924464/1‑150 (MQ=255)
                                                                                                                                           aTAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTtaataa           >  2:2435182/1‑150 (MQ=255)
                                                                                                                                            tAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATaaa          >  2:1328471/1‑150 (MQ=255)
                                                                                                                                            tAAGTGGATATAAGTGAAGTTAGTCACATAAAGAGATAGAAGATTTAGCTAAAAAAAGGGAAAAAACAGTACATAAAGCGTTGACATTACGTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATaaa          >  1:247542/1‑150 (MQ=255)
                                                                                                                                              aGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAatt        >  1:2816366/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CGCATGAGCAGCAAATGCAGCCATACCAGATGCCAGTATCAAAGATATCGAGGTACTTACGACACTTTTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCA  >  CP009273/1576695‑1576992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: