| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,124,797 | C→A | 17.5% | R252L (CGT→CTT) | wcaC ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,124,797 | 0 | C | A | 17.5% | 914.2 / 122.1 | 299 | R252L (CGT→CTT) | wcaC | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (122/124); new base A (36/17); total (158/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.58e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 306 total aligned reads displayed.
TCATCAGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTCA > CP009273/2124648‑2124946 | tcatcaGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAc > 2:3529923/1‑150 (MQ=255)tcatcaGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAc > 1:779352/1‑150 (MQ=255) caGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAg < 1:1354155/150‑1 (MQ=255) aGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGa > 1:804406/1‑150 (MQ=255) aGCTTACGTTTGTCGGTTTCAAAGCCGTGANTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTAGCTGGTTAGTTTTGCCGTCGTAACGCAGa > 1:4277396/1‑150 (MQ=255) cTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATc > 1:3971652/1‑150 (MQ=255) cTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATc > 1:2051952/1‑150 (MQ=255) gTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATgcg < 1:1559312/150‑1 (MQ=255) gTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATgcg > 2:3173794/1‑150 (MQ=255) gTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGccac > 2:28923/1‑150 (MQ=255) gTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCaccacc < 2:2363956/150‑1 (MQ=255) gTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCaccacc < 1:2797180/150‑1 (MQ=255) tttCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACcg < 2:1484443/150‑1 (MQ=255) tttCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCAGCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACcg > 1:2882098/1‑150 (MQ=255) cAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGa > 2:356321/1‑150 (MQ=255) aaaGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGAt > 2:4524968/1‑150 (MQ=255) aaaGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGAt > 2:2590296/1‑150 (MQ=255) aGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGAttt > 1:2737305/1‑150 (MQ=255) gCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCGGGTTAGTTTTGCCGACGTAACGCAGATCATGCGCCACCACCGCGAtttt > 1:219088/1‑150 (MQ=255) cGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCg > 1:468609/1‑150 (MQ=255) cGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCAATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGACACCACCGCGATTTTCg > 1:348174/1‑150 (MQ=255) gTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCgg > 2:825976/1‑150 (MQ=255) gATTAACCACGTTTCCAGCGTTGAACGGCGAGAACTTACCAAAGGTAAGAAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGATGCTGGTTAGTATTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATATTCGGCt > 2:3228674/1‑150 (MQ=255) aTTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCtt < 1:1657200/150‑1 (MQ=255) aTTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCtt < 1:1513973/150‑1 (MQ=255) tAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGc > 2:4089173/1‑150 (MQ=255) ccACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCt < 2:257614/150‑1 (MQ=255) gTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGt > 1:1603024/1‑150 (MQ=255) gTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGt > 1:2353476/1‑150 (MQ=255) tGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGttt > 2:780724/1‑150 (MQ=255) gCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTc < 2:2800672/150‑1 (MQ=255) gCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTc < 2:1896982/150‑1 (MQ=255) ccAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCTATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCATATAATGCGACACCACCGCGATTTTCGGCTTGCCCTGGGTTTcg < 2:4176279/150‑1 (MQ=255) aGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTcgcg < 1:1470999/150‑1 (MQ=255) aGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTcgcg > 1:3698906/1‑150 (MQ=255) cGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCa < 2:500960/150‑1 (MQ=255) ggTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCAc > 2:346179/1‑150 (MQ=255) gTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCAcc > 2:737634/1‑150 (MQ=255) aaCGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGa > 1:2955679/1‑150 (MQ=255) cGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAgg > 1:2466505/1‑150 (MQ=255) ggCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGc < 2:2256337/150‑1 (MQ=255) cGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCaa > 2:4247910/1‑150 (MQ=255) agaACTTACCTAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGAGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGt < 1:4380914/150‑1 (MQ=255) agaACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGt > 2:3435746/1‑150 (MQ=255) aaCTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTcc < 1:625939/150‑1 (MQ=255) cTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGc > 1:1755503/1‑150 (MQ=255) tACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCa < 1:112006/150‑1 (MQ=255) aaaGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAAt > 2:2223650/1‑150 (MQ=255) gTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCt < 1:3913301/150‑1 (MQ=255) tATGCAGTTCAATTTTGTCGCCCAGCGCCTTCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCtt < 1:1385330/150‑1 (MQ=255) tATGCAGTTCAATTTTGTCGCCCAGCGCCATCCTCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGACACCACCGCGATTTTCGGATTGCCCTGGGTTTCGCGCACCGGATGCAAGTCCGCCAGAATCGCtt < 2:2060167/150‑1 (MQ=255) tATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCtt < 2:3472742/150‑1 (MQ=255) tATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCtt < 2:3352375/150‑1 (MQ=255) tATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCtt < 1:3535605/150‑1 (MQ=255) tGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCa > 2:4434936/1‑150 (MQ=255) gCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAg > 2:2810947/1‑150 (MQ=255) aGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGtt < 2:607010/150‑1 (MQ=255) aGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGtt < 2:3254978/150‑1 (MQ=255) aGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGtt < 1:328748/150‑1 (MQ=255) ttCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGc < 1:4207684/150‑1 (MQ=255) cAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCa > 2:3702495/1‑150 (MQ=255) cAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCa < 1:2580166/150‑1 (MQ=255) ttttGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCatat < 2:1381679/150‑1 (MQ=255) gTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAAt < 2:2460163/150‑1 (MQ=255) gCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGcc < 2:2700834/150‑1 (MQ=255) gCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGcc < 2:2243606/150‑1 (MQ=255) cccAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATAGCTTCAGTTGCCATATCAATGCCa > 1:1817731/1‑150 (MQ=255) ccAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCat > 2:1995131/1‑150 (MQ=255) ccAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCat > 2:156178/1‑150 (MQ=255) cAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCatt < 2:2157994/150‑1 (MQ=255) cgcCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCattatt < 2:1029490/150‑1 (MQ=255) gcCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTg > 1:1004583/1‑150 (MQ=255) gcCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTg > 1:725575/1‑150 (MQ=255) ccATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGa > 1:3147575/1‑150 (MQ=255) catcatCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGAt > 1:1036661/1‑150 (MQ=255) atcatcTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATa < 2:2990826/150‑1 (MQ=255) tcatcTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATaa < 1:4395861/150‑1 (MQ=255) ctcGCGTACCAGTTGCCGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCg > 2:2729739/1‑150 (MQ=255) cgcgTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGc > 1:1116347/1‑150 (MQ=255) cgTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCaa < 1:2656044/150‑1 (MQ=255) cgTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCaa > 1:3825496/1‑150 (MQ=255) gTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAAc > 2:3830310/1‑150 (MQ=255) gTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAAc > 1:929393/1‑150 (MQ=255) cAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGccc < 2:1774253/150‑1 (MQ=255) cAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGccc > 2:3786044/1‑150 (MQ=255) aGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCt > 2:4393945/1‑150 (MQ=255) ttGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTgg < 1:526163/150‑1 (MQ=255) cTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGAcc < 1:2590296/150‑1 (MQ=255) tGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCg > 1:4076797/1‑150 (MQ=255) gTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTa < 2:3864929/150‑1 (MQ=255) gTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTa < 1:3321537/150‑1 (MQ=255) aGTTTTGTCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAg > 1:3578732/1‑150 (MQ=255) tttGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCt < 2:1299253/150‑1 (MQ=255) tGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCTCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTAt > 1:1290780/1‑150 (MQ=255) gtcgtAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGaa > 2:2495101/1‑150 (MQ=255) cgtAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAg < 1:1869110/150‑1 (MQ=255) gtAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGc > 1:4459785/1‑150 (MQ=255) tAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCg > 1:1386612/1‑150 (MQ=255) aCGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTc < 2:2938373/150‑1 (MQ=255) cGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTCa < 1:45930/150‑1 (MQ=255) | TCATCAGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTCA > CP009273/2124648‑2124946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |