| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 163,686 | C→A | 38.5% | Q824K (CAG→AAG) | mrcB → | fused glycosyl transferase and transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 163,686 | 0 | C | A | 38.5% | 356.6 / 276.8 | 261 | Q824K (CAG→AAG) | mrcB | fused glycosyl transferase and transpeptidase |
| Reads supporting (aligned to +/- strand): ref base C (81/79); new base A (31/70); total (112/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.00e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 261 total aligned reads displayed.
TGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCCTTTCTTTTCAT > CP009273/163538‑163833 | tgCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCaa > 1:1376592/1‑150 (MQ=255) gCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAag < 1:4324433/150‑1 (MQ=255) ggTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAg < 2:3988545/150‑1 (MQ=255) gCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAg > 2:2876848/1‑150 (MQ=255) cATGCGTATCTTGCCGGTCTGGTCCAGCGATCCGCAATCGCTGTGCTAGCAGAGCGAGATGCAGCTGCAGCCGTGAGTCAATCCGTTTGATAAGT‑CTTCTGAGCCGCAGCAACATCCGCAACAGCATCCTGCTAATCAAGAGCAGATAGa < 2:3586945/150‑1 (MQ=255) gCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAg < 1:4427535/150‑1 (MQ=255) gTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCg < 2:12450/150‑1 (MQ=255) aTCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGAc < 1:2311642/150‑1 (MQ=255) aTCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGAc > 1:1240149/1‑150 (MQ=255) cTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACgg < 1:4453856/150‑1 (MQ=255) cTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACgg > 2:3295182/1‑150 (MQ=255) ttGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGgt > 2:4524013/1‑150 (MQ=255) ttGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGgt < 1:3839085/150‑1 (MQ=255) tGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGgtg > 1:4389833/1‑150 (MQ=255) ggTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGc > 2:1757073/1‑150 (MQ=255) cTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCgg > 2:9055/1‑150 (MQ=255) cTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCgg > 2:2317455/1‑150 (MQ=255) gACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTg > 2:367639/1‑150 (MQ=255) aCCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTgg > 1:1252398/1‑150 (MQ=255) cAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGAt < 1:3794765/150‑1 (MQ=255) cAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGAt > 1:2769932/1‑150 (MQ=255) cAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGAt > 1:3103392/1‑150 (MQ=255) gCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCa < 2:108649/150‑1 (MQ=255) gCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCa < 2:3778048/150‑1 (MQ=255) cGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCaa < 1:3050056/150‑1 (MQ=255) gATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAg > 1:3404680/1‑150 (MQ=255) gATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAg > 1:2840090/1‑150 (MQ=255) ccGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGat > 1:925397/1‑150 (MQ=255) cGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGata < 2:2608359/150‑1 (MQ=255) gCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGatat < 1:1484440/150‑1 (MQ=255) aaTCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCCGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGt > 2:4059756/1‑150 (MQ=255) aaTCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGt < 2:4449303/150‑1 (MQ=255) aTCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATggt > 2:3374620/1‑148 (MQ=255) tCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGttt < 1:34301/150‑1 (MQ=255) cGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTg < 1:4393501/150‑1 (MQ=255) gCTGTGCCAACAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTgg < 2:1289560/150‑1 (MQ=255) tgtgCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGgta > 2:4386685/1‑150 (MQ=255) ccAGCTGAGCTAGTTGCAGCAGCTGCCTTCTGCAAATCCTTTTTA‑CATTACTACACAGCCGACGAAACCCCGGAAACAGAAACCGGCTCACAAATCGAATAACGCCAGC‑ACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAAt < 2:558230/150‑1 (MQ=255) cagcagAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAAt > 1:250834/1‑150 (MQ=255) agcagAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAAtt < 1:3577902/150‑1 (MQ=255) agcagAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAAtt < 1:1349626/150‑1 (MQ=255) cagAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTaa > 1:115507/1‑150 (MQ=255) agagCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAAc > 2:4205843/1‑150 (MQ=255) gagCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACa > 1:1978088/1‑150 (MQ=255) agCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACAt > 1:2943962/1‑150 (MQ=255) gagaTGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTa > 1:1803370/1‑150 (MQ=255) gagaTGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTa > 2:1408240/1‑150 (MQ=255) gcagcagcaGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGt > 1:339612/1‑150 (MQ=255) gcagcCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATa < 1:2979934/150‑1 (MQ=255) ccGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCgg < 1:455443/150‑1 (MQ=255) gTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGAt < 2:3096712/150‑1 (MQ=255) tCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATg < 2:10225/150‑1 (MQ=255) cAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATgg > 2:3479813/1‑150 (MQ=255) cAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATgg > 2:1538894/1‑150 (MQ=255) ggCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCg > 2:3736249/1‑150 (MQ=255) ggCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCg < 2:2101513/150‑1 (MQ=255) gCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGa < 2:4348373/150‑1 (MQ=255) cAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAg > 2:1329355/1‑150 (MQ=255) aaTCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGt < 2:1376592/150‑1 (MQ=255) tCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTg > 2:3235751/1‑150 (MQ=255) tCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTg < 1:4554956/150‑1 (MQ=255) ccGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGc > 1:2664896/1‑150 (MQ=255) cGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGcc < 2:3254439/150‑1 (MQ=255) cGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGcc < 2:2732821/150‑1 (MQ=255) tGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATcc > 2:369568/1‑150 (MQ=255) gATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCg < 2:2042149/150‑1 (MQ=255) tCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGt < 2:699792/150‑1 (MQ=255) aGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTaa > 2:4591250/1‑150 (MQ=255) gT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTaaa < 1:3632732/150‑1 (MQ=255) tcAGCAGCAGCAACATCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTATCCGGTTGGATCACGGATATGGTTGGTAGTAATTAACATCTAAGCTTGAAATACCGGAAGGCGAGTTGCCATCCGGTAAAATAACa > 1:2108938/1‑150 (MQ=255) aGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATc < 1:2681248/150‑1 (MQ=255) aGCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATc < 2:4081728/150‑1 (MQ=255) gCCGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAACATAACATcc < 1:693390/150‑1 (MQ=255) ccGCAGCAACAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATccc < 1:1474227/150‑1 (MQ=255) cGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCa > 1:763896/1‑150 (MQ=255) agcaACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCt < 2:1928071/150‑1 (MQ=255) agcaACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCt > 2:2455909/1‑150 (MQ=255) gcaACCGCCGCCACCGCAACCTGCTAAGCAAGCGCAGAACGACAGCGCCGGGGTAGCCGGGTGGATCAAGGCTATGTTTGGTAGTAATTAACATCTACGCGTGAAATACCGGCTGGCGAGTTGCCCTCCGGTAACATAACATCCCATCTa < 2:3104416/150‑1 (MQ=255) caACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTaa < 1:4494537/150‑1 (MQ=255) aaCAGCCGCAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAg < 2:3039120/150‑1 (MQ=255) gCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGatat < 2:1616410/150‑1 (MQ=255) cGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTa < 1:316204/150‑1 (MQ=255) cAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAAc < 1:2376076/150‑1 (MQ=255) cAACAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAAc > 1:398575/1‑150 (MQ=255) aaCAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAAcc > 1:645953/1‑150 (MQ=255) aaCAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAAcc > 1:644159/1‑150 (MQ=255) aaCAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAAcc > 2:3809559/1‑150 (MQ=255) aaCAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAAcc > 2:1943315/1‑150 (MQ=255) aCAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATGAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAAccc < 2:1071904/150‑1 (MQ=255) cAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCct < 2:3946675/150‑1 (MQ=255) cAGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCct < 1:4236876/150‑1 (MQ=255) aGCAACCTGCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGTATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCctt < 1:3675889/150‑1 (MQ=255) gCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCcttt < 1:4205843/150‑1 (MQ=255) gCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCcttt > 1:3769198/1‑150 (MQ=255) aaCCTGCACAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCctttct < 1:1578008/150‑1 (MQ=255) aCCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCctttctt > 1:1416479/1‑150 (MQ=255) cggCTAAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCCTTTCtttt < 1:324191/148‑1 (MQ=255) cTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCCTTTCtttt < 1:1035473/150‑1 (MQ=255) cTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCCTTTCTTTTCAt > 1:1909475/1‑150 (MQ=255) cTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCCTTTCTTTTCAt > 1:3734968/1‑150 (MQ=255) | TGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGT‑CTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAACATCTAAGCGTGAAATACCGGATGGCGAGTTGCCATCCGGTAAAATAACATCCCATCTAAGATATTAACCCTTTCTTTTCAT > CP009273/163538‑163833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |