| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,417,358 | C→A | 17.1% | E211* (GAA→TAA) | hisP ← | histidine/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,417,358 | 0 | C | A | 17.1% | 858.8 / 115.8 | 280 | E211* (GAA→TAA) | hisP | histidine/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (110/122); new base A (20/28); total (130/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.79e-01 | |||||||||||
Only 100 of 284 total aligned reads displayed.
AGGAAATTATTTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGCCCGCGCGATAGA > CP009273/2417209‑2417505 | agGAAATTATTTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTc > 2:4184936/1‑150 (MQ=255)agGAAATTATTTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTc > 2:1384945/1‑150 (MQ=255) aaTTATTTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGa < 1:3411248/150‑1 (MQ=255) attattTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAg > 1:369425/1‑150 (MQ=255) attTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCa > 2:387977/1‑150 (MQ=255) attTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCa > 1:221763/1‑150 (MQ=255) ttCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACt < 1:4428979/150‑1 (MQ=255) cAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTac < 1:2865045/150‑1 (MQ=255) aGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTCTTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTacc < 2:3302574/150‑1 (MQ=255) aGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTacc > 2:384356/1‑150 (MQ=255) gCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTacca < 2:4410636/150‑1 (MQ=255) gCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTacca < 2:3674928/150‑1 (MQ=255) cGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTaccac < 2:2524369/150‑1 (MQ=255) tCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCAt > 2:2753914/1‑150 (MQ=255) cccTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATg < 1:1528880/150‑1 (MQ=255) ccTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATgg < 2:2828061/150‑1 (MQ=255) ccTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATgg < 2:1341882/150‑1 (MQ=255) cTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGt > 2:3535013/1‑150 (MQ=255) aaGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGtttt < 2:2004329/150‑1 (MQ=255) aaGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGtttt < 2:1047580/150‑1 (MQ=255) aGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTc < 1:1044506/150‑1 (MQ=255) aGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTc > 1:2429349/1‑150 (MQ=255) aGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTc > 1:1655064/1‑150 (MQ=255) ggAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTcc < 2:41392/150‑1 (MQ=255) aCCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCct > 2:1789731/1‑150 (MQ=255) aCCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCct < 2:1010493/150‑1 (MQ=255) aCCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCct > 1:1537340/1‑150 (MQ=255) ccGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCctc < 2:2323900/150‑1 (MQ=255) gTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCtctt > 1:1113967/1‑150 (MQ=255) tGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCtcttct > 2:2970210/1‑150 (MQ=255) cAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGc > 2:4298628/1‑150 (MQ=255) cAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGc < 2:1444706/150‑1 (MQ=255) aGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGcc > 1:2194056/1‑150 (MQ=255) aGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTACTGcc > 1:2344369/1‑150 (MQ=255) gAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGtt < 2:4617315/150‑1 (MQ=255) aGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTtg < 2:1550098/150‑1 (MQ=255) aGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTtg > 1:1301055/1‑150 (MQ=255) cTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTtgctgc < 1:139660/150‑1 (MQ=255) tttGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCa > 1:3122854/1‑150 (MQ=255) cGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCataat < 2:3061799/150‑1 (MQ=255) cGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCataat > 2:1288299/1‑150 (MQ=255) gggTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCataata > 2:3117949/1‑150 (MQ=255) gggTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCataata > 2:2717069/1‑150 (MQ=255) ggTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATAc < 2:2503939/150‑1 (MQ=255) ggTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATAc < 1:355923/150‑1 (MQ=255) ggTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATAc < 2:2613662/150‑1 (MQ=255) gTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACg < 2:1305090/150‑1 (MQ=255) ttGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGc > 2:4473641/1‑150 (MQ=255) tAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTc < 2:2298514/150‑1 (MQ=255) gCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTa < 1:1825208/150‑1 (MQ=255) gCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTa > 2:625763/1‑150 (MQ=255) ccGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCa < 1:264593/150‑1 (MQ=255) ggCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGt > 2:987072/1‑150 (MQ=255) ggCGCGCCCTCTTCATCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGt > 1:3153562/1‑150 (MQ=255) gcgcgcCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGtt < 1:1016319/150‑1 (MQ=255) gcgcgcCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGtt < 1:2726839/150‑1 (MQ=255) gcgcCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCa > 1:689163/1‑150 (MQ=255) cccTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGa > 1:208098/1‑150 (MQ=255) ccTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGAt > 1:2463833/1‑150 (MQ=255) ctctTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATc > 1:3231531/1‑150 (MQ=255) ctctTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATc > 2:2154219/1‑150 (MQ=255) ctctTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATc < 2:3404704/150‑1 (MQ=255) cttcttctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGa < 2:4523151/150‑1 (MQ=255) cttcttctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGa < 1:3326999/150‑1 (MQ=255) cttcttctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGa < 1:884409/150‑1 (MQ=255) tcttctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAATCATGGCGAGCAAAGACCATTTCGTGAGTCACTACCACCATGTTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCATCACTTCGCCTACCAGTTCAGGATCGAgc < 1:404186/150‑1 (MQ=255) tcttctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAgc < 2:2072419/150‑1 (MQ=255) cttctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTATTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAgcg > 2:4497787/1‑150 (MQ=255) cttctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAgcg < 1:2991692/150‑1 (MQ=255) ctATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCg < 1:3643415/150‑1 (MQ=255) tATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGa < 1:1227573/150‑1 (MQ=255) aTTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGag > 2:1887005/1‑150 (MQ=255) aTTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGag < 2:476816/150‑1 (MQ=255) ttttCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGagg < 1:4150020/150‑1 (MQ=255) cccTGATTGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGaggtaggt < 2:2716691/150‑1 (MQ=255) cTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTtc > 1:1718139/1‑150 (MQ=255) tGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTtca > 2:2813767/1‑150 (MQ=255) ggaAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACa < 2:458909/150‑1 (MQ=255) gaAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAg < 1:3656713/150‑1 (MQ=255) gaAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAg > 1:3441622/1‑150 (MQ=255) aaTGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTaa < 2:2571239/150‑1 (MQ=255) tGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTaaaa > 2:789338/1‑150 (MQ=255) cATGAGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACtt < 2:803345/150‑1 (MQ=255) aGTAGAAACATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCgg > 1:3505091/1‑150 (MQ=255) gTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGt > 1:3916544/1‑150 (MQ=255) aCATGGCGAGCAAAGCCCATTTAGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATc < 2:2434270/150‑1 (MQ=255) cATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCg < 2:3594244/150‑1 (MQ=255) cATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCg < 2:1275098/150‑1 (MQ=255) aTGGAGAGCAAATCCCATATCTTGAGTCACAACAACCAAGGTTATCCCCTCAGCTGCCAGTTGCTGCATAATACGAAACACTTCTCATACCAGTACAGGATCGATCGCAGAGGTAGGTTCATCAAACACTAAAAATTCCGGTTCCAACga > 2:4033719/1‑149 (MQ=255) tGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGcc > 2:493947/1‑150 (MQ=255) tGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGcc > 1:2872446/1‑150 (MQ=255) gCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAg < 2:1694461/150‑1 (MQ=255) gCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGcc > 2:1524051/1‑150 (MQ=255) cAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGccc < 2:507003/150‑1 (MQ=255) aaaaGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGccc < 1:25587/149‑1 (MQ=255) aGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGCCcgcg > 1:822862/1‑150 (MQ=255) aGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGCCcgcg > 1:84275/1‑150 (MQ=255) cccATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGCCcgcgcg > 1:4582745/1‑150 (MQ=255) tttCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTNCCGGTTCCATCGCCAGCGCCCGCGCGATAg < 1:4278961/150‑1 (MQ=255) ttCGTGAGTCACTACCACCATGGTGTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGCCCGCGCGATAGa < 2:3230010/150‑1 (MQ=255) | AGGAAATTATTTCAGCGATCCCTTAAGGAACCGTTGCAGACGAGGGCTTTGCGGGTTGCCAAATAACTGCTCCGGCGCGCCCTCTTCTTCTATTTTCCCCTGATGGAGGAAAATGACATGAGTAGAAACATGGCGAGCAAAGCCCATTTCGTGAGTCACTACCACCATGGTTTTCCCCTCTTCTGCCAGTTGCTGCATAATACGCAACACTTCGCCTACCAGTTCAGGATCGAGCGCCGAGGTAGGTTCATCAAACAGTAAAACTTCCGGTTCCATCGCCAGCGCCCGCGCGATAGA > CP009273/2417209‑2417505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |