| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,522,624 | C→A | 48.0% | A304A (GCG→GCT) | ligA ← | DNA ligase, NAD(+)‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,522,624 | 0 | C | A | 48.0% | 151.0 / inf | 254 | A304A (GCG→GCT) | ligA | DNA ligase, NAD(+)‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (66/66); new base A (47/75); total (113/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.72e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 264 total aligned reads displayed.
CTCACCAGCACGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACAAAGCGTTACCCGATC > CP009273/2522475‑2522773 | cTCATCAGCACGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCAcgc > 2:2765878/1‑150 (MQ=255) cACCAGCACGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCAcgagc < 1:2095677/150‑1 (MQ=255) aCCAGCACGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCAcgcgcg < 1:1788366/150‑1 (MQ=255) cAGCACGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGAc > 2:506637/1‑150 (MQ=255) aGCACGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACa < 1:624376/150‑1 (MQ=255) aCGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAg > 1:2882302/1‑150 (MQ=255) aCGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAg < 2:3568687/150‑1 (MQ=255) cGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGc > 1:4557929/1‑150 (MQ=255) gCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGcc > 2:42659/1‑150 (MQ=255) gCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGcc > 2:251349/1‑150 (MQ=255) ccTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCa < 2:1685093/150‑1 (MQ=255) ccTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCa > 2:2287563/1‑150 (MQ=255) cTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCaa < 2:4454145/150‑1 (MQ=255) cTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCaa < 1:3045124/150‑1 (MQ=255) gCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAgc < 1:576954/150‑1 (MQ=255) cAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAgct < 2:4580822/150‑1 (MQ=255) cAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAgct < 2:2709634/150‑1 (MQ=255) cAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAgct < 2:3630421/150‑1 (MQ=255) ggACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCct < 1:4322941/150‑1 (MQ=255) ggACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCct < 1:2271260/150‑1 (MQ=255) gACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCctg > 1:489140/1‑150 (MQ=255) gACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCctg > 1:2828755/1‑150 (MQ=255) gACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCctg > 1:1772256/1‑150 (MQ=255) cAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCctgct < 2:4384835/150‑1 (MQ=255) ttCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGc < 2:2612472/150‑1 (MQ=255) tCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGcc > 2:1986711/1‑150 (MQ=255) tCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGcc < 2:3687626/150‑1 (MQ=255) cAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAg > 2:432057/1‑150 (MQ=255) aGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGt < 2:1407202/150‑1 (MQ=255) gACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTg < 2:1136900/150‑1 (MQ=255) aCGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACACAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGa < 1:9532/150‑1 (MQ=255) aaCAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGAc > 2:3290249/1‑150 (MQ=255) aaCAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGAc > 1:1262575/1‑150 (MQ=255) aaCAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGAc < 1:47127/150‑1 (MQ=255) aGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCtt > 1:3036945/1‑150 (MQ=255) gCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGATTTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTaa < 2:2451808/150‑1 (MQ=255) cGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACACAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAAt < 1:4174859/150‑1 (MQ=255) cGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAAt < 2:879289/150‑1 (MQ=255) tAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATca > 2:16601/1‑150 (MQ=255) tAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATca > 1:1090990/1‑150 (MQ=255) aaTCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATcac > 2:925694/1‑150 (MQ=255) tCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATcacca > 1:1893004/1‑150 (MQ=255) cgcgCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATcaccac > 2:1787331/1‑150 (MQ=255) gcgcCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACg < 1:1016363/150‑1 (MQ=255) gcCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGcc < 2:695506/150‑1 (MQ=255) gcCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGcc > 2:3235878/1‑150 (MQ=255) aGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTc < 1:1686917/150‑1 (MQ=255) gTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCg < 2:1159082/150‑1 (MQ=255) tACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGa < 2:284978/150‑1 (MQ=255) tACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCAGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGa > 1:3620203/1‑150 (MQ=255) cGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGata < 2:4490448/150‑1 (MQ=255) gCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGatat > 1:2426272/1‑150 (MQ=255) cccAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATc > 2:2073878/1‑150 (MQ=255) ccTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGc > 1:2232834/1‑150 (MQ=255) ccTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGc < 1:3136385/150‑1 (MQ=255) cTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGcc < 1:2367005/150‑1 (MQ=255) tGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGccc < 2:3408731/150‑1 (MQ=255) gAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCa < 1:1999152/150‑1 (MQ=255) aaCTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGc < 2:2309626/150‑1 (MQ=255) tCGACGTCACGCACACAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTc < 1:1401616/150‑1 (MQ=255) tCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTc < 1:815184/150‑1 (MQ=255) cGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCg > 1:1883396/1‑150 (MQ=255) tCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCgg > 2:2099315/1‑150 (MQ=255) tCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCgg > 2:4032831/1‑150 (MQ=255) cACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGt > 2:3338639/1‑150 (MQ=255) gCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGtctt < 1:406970/150‑1 (MQ=255) gCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGtctt > 1:3546721/1‑150 (MQ=255) aaaGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCttcttc > 1:683139/1‑150 (MQ=255) caGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTcc < 2:1454340/149‑1 (MQ=255) aaGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTcc < 1:3197610/150‑1 (MQ=255) gTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACt < 2:3089079/150‑1 (MQ=255) tCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACtt < 1:263494/150‑1 (MQ=255) tCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACtt > 1:443669/1‑150 (MQ=255) cATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACttt < 2:1320965/150‑1 (MQ=255) tCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTtgt < 1:3471827/150‑1 (MQ=255) ccTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGa < 1:3376612/150‑1 (MQ=255) gcgcCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACg < 2:2491223/150‑1 (MQ=255) gcCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGcc > 1:3812293/1‑150 (MQ=255) gcCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGcc > 1:2144226/1‑150 (MQ=255) ccGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCa < 1:739530/150‑1 (MQ=255) cGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAg < 2:3494857/150‑1 (MQ=255) aaTTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCAct > 2:4194733/1‑150 (MQ=255) tttAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCActtc < 1:3168045/150‑1 (MQ=255) ttAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCActtct > 1:4203889/1‑150 (MQ=255) ttAAACGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCActtct < 1:2239263/150‑1 (MQ=255) aaaCGCTACCGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACttcttc > 2:2469362/1‑150 (MQ=255) cGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTccgc > 1:386240/1‑150 (MQ=255) aCCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGAt < 2:3892070/150‑1 (MQ=255) ccGCCCAGCGCGGGGCACGCGCGCCCACGCCACGCTGCTCCTGCTGTGCCCGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGAtt < 2:4522619/150‑1 (MQ=255) ccGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGAtt > 1:4029460/1‑150 (MQ=255) cGCCCAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTc > 2:1016654/1‑150 (MQ=255) cccAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTcac > 1:3912197/1‑150 (MQ=255) cccAGCGCGGGGCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTcac < 1:3632526/150‑1 (MQ=255) ccAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTcaca < 1:4327048/150‑1 (MQ=255) aGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACaaa > 2:296543/1‑150 (MQ=255) cgcgGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACAAAGc > 1:2695230/1‑150 (MQ=255) ggggCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACAAAGCGtt > 2:3197789/1‑150 (MQ=255) ggCACGAGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACAAAGCGTTAc < 2:4131523/150‑1 (MQ=255) cgcgcgACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACAAAGCGTTACCCGa < 1:1560889/150‑1 (MQ=255) cgcgACAAAGCCAAGCTGCTCCTGCTGTGCCATTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACAAAGCGTTACCCGATc < 2:729828/150‑1 (MQ=255) | CTCACCAGCACGCCTGCAACATGGACAGGTTCCAGACGCGCAACAGGCGTAATCGCGCCAGTACGCCCAACCTGAAACTCGACGTCACGCACAAAGGTCATCTGCTCCTGCGCCGGGAATTTAAACGCTACCGCCCAGCGCGGGGCACGCGCGACAAAGCCAAGCTGCTCCTGCTGTGCCAGTGAGTTGACCTTAATCACCACGCCGTCGATATCAAAGCCCAGCGTCGGGCGGTCTTCTTCCACTTTGTGATAGAACGCCAGCACTTCTTCCGCCGATTCACAAAGCGTTACCCGATC > CP009273/2522475‑2522773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |