| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,555,542 | C→A | 15.6% | R25R (CGG→AGG) | yffO → | CPZ‑55 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,555,542 | 0 | C | A | 15.6% | 874.1 / 96.7 | 269 | R25R (CGG→AGG) | yffO | CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base C (138/89); new base A (23/19); total (161/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 270 total aligned reads displayed.
TTTTGTCAATTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGACTTCAGGGA > CP009273/2555393‑2555690 | tttGTCAATTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCg < 1:3575840/150‑1 (MQ=255) tGTCAATTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAATCGCGGTCGGc > 2:2159532/1‑150 (MQ=255) tGTCAATTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGc < 1:1576567/150‑1 (MQ=255) gTCAATTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGcc > 1:1474528/1‑150 (MQ=255) tCAATTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCa < 1:2890526/150‑1 (MQ=255) aaTTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTCTGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGc > 2:671384/1‑150 (MQ=255) aTTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCt > 1:1200152/1‑150 (MQ=255) aTTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCt > 1:3519504/1‑150 (MQ=255) tttCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTaa < 1:172659/150‑1 (MQ=255) ttCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTaaa < 1:3220121/150‑1 (MQ=255) cAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAata < 2:3350658/150‑1 (MQ=255) cAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAata > 1:3039311/1‑150 (MQ=255) cAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAata > 2:2794373/1‑150 (MQ=255) ccTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATaa > 2:865322/1‑150 (MQ=255) ccTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATaa > 2:3183323/1‑150 (MQ=255) ccTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATaa < 2:4562034/150‑1 (MQ=255) cAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGa < 1:5668/150‑1 (MQ=255) ttCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGaaaa < 2:199417/150‑1 (MQ=255) cTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGaaaaaa > 1:1285663/1‑150 (MQ=255) ttGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAAt > 1:4499729/1‑150 (MQ=255) ttGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAAAATAATGAAAAAAt > 1:4116393/1‑150 (MQ=255) tGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATa < 1:4073421/150‑1 (MQ=255) cGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGc < 1:2472964/150‑1 (MQ=255) gAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCa > 1:3661828/1‑150 (MQ=255) aaaTGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACg < 2:1575714/150‑1 (MQ=255) aaaTGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACg < 2:2859494/150‑1 (MQ=255) aTGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCa > 1:3176110/1‑150 (MQ=255) aTGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCa > 1:3182996/1‑150 (MQ=255) ggCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGTACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCaaa < 2:855970/150‑1 (MQ=255) ggCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCaaa > 1:1785210/1‑150 (MQ=255) cAAATATATCGGTATTTTTCATCATTTATTGGGTGTTTTATGGAAGTCGACCTTATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAATAAGCGCTGTCTTCCAGCTAAATTTAATTAAAAAATAGCTTCGCAAATc < 2:3267837/150‑1 (MQ=255) aaaaaTAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCg > 1:2170478/1‑150 (MQ=255) aaaaaTAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCg > 1:3813576/1‑150 (MQ=255) aaaaaTAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCg > 1:2520797/1‑150 (MQ=255) aCGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTAtt > 1:3268544/1‑150 (MQ=255) ggTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTgg > 1:3975027/1‑150 (MQ=255) ggTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTgg > 1:4594402/1‑150 (MQ=255) gTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGt < 1:3381020/150‑1 (MQ=255) gTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGt < 1:275000/150‑1 (MQ=255) gTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGt < 1:2311835/150‑1 (MQ=255) gTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGAAACGCAAATCGTCCTATTGGt > 1:2675902/1‑150 (MQ=255) tATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTa > 1:4451933/1‑150 (MQ=255) tttCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATATATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCg > 2:2102030/1‑150 (MQ=255) tttCATCATTTAGTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGtcatcg > 2:2657595/1‑145 (MQ=255) atcatTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAgg > 2:1733622/1‑150 (MQ=255) atTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTta < 2:905478/150‑1 (MQ=255) ttGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGtt > 2:410414/1‑150 (MQ=255) gggggTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTg < 1:2148205/150‑1 (MQ=255) ttATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGa < 1:3689839/150‑1 (MQ=255) aTGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATc > 2:3929937/1‑150 (MQ=255) tGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCa > 1:1280719/1‑150 (MQ=255) ggAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAg < 2:3638659/150‑1 (MQ=255) gAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGc > 2:964635/1‑150 (MQ=255) aaGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCa > 1:2300320/1‑150 (MQ=255) aaGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCa < 1:2821229/150‑1 (MQ=255) aaGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCa > 2:1311383/1‑150 (MQ=255) aaCTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGc < 2:2677436/150‑1 (MQ=255) aCTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGcc > 1:3114374/1‑150 (MQ=255) aCTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGcc > 2:1373739/1‑150 (MQ=255) aCTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGcc > 2:3408843/1‑150 (MQ=255) tGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAg < 2:54810/150‑1 (MQ=255) tGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAg < 2:54733/150‑1 (MQ=255) gATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAgg > 2:4400969/1‑150 (MQ=255) aTAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAggg > 1:144207/1‑150 (MQ=255) aTAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAggg < 1:1886279/150‑1 (MQ=255) tAGAAAACAATGGGTTAGGCATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGa > 2:1001337/1‑150 (MQ=255) tAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATNGTTTGCGCAAGATCAGCATGATGCCAGGGa < 1:4280976/150‑1 (MQ=255) tAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGa < 1:2363068/150‑1 (MQ=255) gAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATg > 1:3932275/1‑150 (MQ=255) aatcattGGGTTAGACATTTATGACACCAGCGAAACACCGACAAAGCGCGGTCGGCCAGCTAAATATAATGATAAAATAGCAACGCAAATCGTCCTCTTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCCGGGATGcc < 2:1858216/144‑1 (MQ=255) aCAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGa < 1:594107/150‑1 (MQ=255) aCAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGa < 1:1082583/150‑1 (MQ=255) aCAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGa > 2:772564/1‑150 (MQ=255) cAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAg < 1:838755/150‑1 (MQ=255) tGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCa > 1:1509616/1‑150 (MQ=255) ggTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCAcc < 2:4414409/150‑1 (MQ=255) gTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCg > 1:3905348/1‑150 (MQ=255) aCATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAga < 1:2076197/150‑1 (MQ=255) aTTTATGACACCAGCGAAACACCGAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAgatg > 2:3059376/1‑150 (MQ=255) ttATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAgatgat < 2:672767/150‑1 (MQ=255) tATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGatgatg > 2:1834638/1‑150 (MQ=255) tATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGatgatg > 2:1535306/1‑150 (MQ=255) tGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATgcg < 2:588742/150‑1 (MQ=255) acCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTgg > 1:4052541/1‑150 (MQ=255) ccAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGc > 2:1451417/1‑150 (MQ=255) aGCGAAACACCGAAAAAGCGCGGTCGGCCATCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATTATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCaa < 1:1931143/150‑1 (MQ=255) aGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCaa > 2:3563694/1‑150 (MQ=255) gAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTg > 2:3605967/1‑150 (MQ=255) gAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTg > 1:700325/1‑150 (MQ=255) acacCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAg > 1:3467599/1‑150 (MQ=255) cacCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACACAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGc > 1:2488647/1‑150 (MQ=255) acCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCa < 1:430473/150‑1 (MQ=255) ccGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCat > 2:1190746/1‑150 (MQ=255) gAAAAAGCGCGGTAGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCatat > 1:1645072/1‑150 (MQ=255) aaaaGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATgg > 2:507423/1‑150 (MQ=255) aaaGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGa > 2:2252401/1‑150 (MQ=255) aaGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGAc > 2:3892483/1‑150 (MQ=255) aaGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGAc > 2:3892368/1‑150 (MQ=255) ggTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGACTTCagg > 1:2578712/1‑150 (MQ=255) tCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGACTTCaggga < 2:247307/150‑1 (MQ=255) | TTTTGTCAATTTTCAACCTCAATTCTTGCGAAAAATGGCAAAAATAACGGTATTTTTCATCATTTATTGGGGGTTTTATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGACTTCAGGGA > CP009273/2555393‑2555690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |