| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,628,587 | C→A | 7.2% | Q333K (CAA→AAA) | xseA → | exonuclease VII, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,628,587 | 0 | C | A | 7.2% | 1329.8 / 46.5 | 348 | Q333K (CAA→AAA) | xseA | exonuclease VII, large subunit |
| Reads supporting (aligned to +/- strand): ref base C (191/132); new base A (11/14); total (202/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 349 total aligned reads displayed.
TGGCGATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCTTAGCGCCAC > CP009273/2628438‑2628735 | tGGCGATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATc > 1:4289527/1‑150 (MQ=255) ggCGATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCa < 2:2008551/150‑1 (MQ=255) gCGATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCaa < 2:1053407/150‑1 (MQ=255) gATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACt < 1:4004087/150‑1 (MQ=255) tGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTa < 2:1590833/150‑1 (MQ=255) gATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAg > 1:366618/1‑150 (MQ=255) gATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAg < 1:1532761/150‑1 (MQ=255) attattATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGc < 1:3233957/150‑1 (MQ=255) attattATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGc > 1:2453690/1‑150 (MQ=255) attatCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTa > 1:1812113/1‑150 (MQ=255) ttatCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTAc > 1:1084828/1‑150 (MQ=255) atCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCg > 1:3402196/1‑150 (MQ=255) atCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCg > 1:3474191/1‑150 (MQ=255) tctcGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCgg > 1:2914050/1‑150 (MQ=255) tcGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGc > 2:796043/1‑150 (MQ=255) tcGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCGGGc < 1:2349674/150‑1 (MQ=255) ccAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAAc > 1:1475820/1‑150 (MQ=255) cAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAAca > 1:3689111/1‑150 (MQ=255) ccGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAAcagca < 1:1035240/150‑1 (MQ=255) ccGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAAcagca > 1:1427663/1‑150 (MQ=255) cGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAAcagcag > 1:4214487/1‑150 (MQ=255) gCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCGGGCAAcagcagc > 2:1874206/1‑150 (MQ=255) cacaCGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAAcagcagca > 1:3150997/1‑150 (MQ=255) acGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCg > 2:4590652/1‑150 (MQ=255) acGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCg > 2:1718177/1‑150 (MQ=255) tCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGtt > 2:2172748/1‑150 (MQ=255) tCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGtt < 2:147237/150‑1 (MQ=255) tttACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAaca > 1:3069030/1‑150 (MQ=255) ttACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAacac > 2:1977545/1‑150 (MQ=255) cGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGc < 2:2755072/150‑1 (MQ=255) gCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCg < 1:2640082/150‑1 (MQ=255) aaaTTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGc > 2:2545074/1‑150 (MQ=255) aaaTTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGc > 2:1808356/1‑150 (MQ=255) atcaCCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATc > 1:818379/1‑150 (MQ=255) ccGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCa < 1:3772519/150‑1 (MQ=255) cGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCaa > 1:261379/1‑150 (MQ=255) gATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCaaa > 2:3690917/1‑150 (MQ=255) gATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCaaa < 1:1793204/150‑1 (MQ=255) ttACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAAt > 2:3415683/1‑150 (MQ=255) tACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATc < 1:3892496/150‑1 (MQ=255) acagcaacagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATcc > 1:3328682/1‑150 (MQ=255) acagcaacagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATcc < 2:2665447/150‑1 (MQ=255) caacagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAg < 2:1331725/150‑1 (MQ=255) aacagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGc < 1:1243096/150‑1 (MQ=255) aacagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGc > 2:4252933/1‑150 (MQ=255) acagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAACATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGcc < 2:1552244/150‑1 (MQ=255) acagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGcc < 1:2025153/150‑1 (MQ=255) cagcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCg < 2:2374818/150‑1 (MQ=255) agcaTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGa > 1:1513959/1‑150 (MQ=255) caTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAg > 1:2261844/1‑150 (MQ=255) aTCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGa > 1:2170402/1‑150 (MQ=255) tcAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCTGCGGTTAACACAGCGTCTGAATCAGCAAAATCCACAGCCGAAGATTCa < 1:69972/149‑1 (MQ=255) cAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCAt > 2:4282760/1‑150 (MQ=255) cAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCAt > 1:4493055/1‑150 (MQ=255) tCCGGCTGGCACGCCAGCAAACCCTGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATcgcg > 1:40492/1‑150 (MQ=255) tCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATcgcg > 1:885691/1‑150 (MQ=255) tCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATcgcg > 2:2703208/1‑150 (MQ=255) gCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCa < 2:3901162/150‑1 (MQ=255) gCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCa > 1:1692313/1‑150 (MQ=255) cTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCaa < 1:1165503/150‑1 (MQ=255) tGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCaaa < 2:4496295/150‑1 (MQ=255) ggCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAAc < 1:3101178/150‑1 (MQ=255) gCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAAcg < 2:3804922/150‑1 (MQ=255) gCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAAcg < 1:2313770/150‑1 (MQ=255) cACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAAcgc > 1:3979695/1‑150 (MQ=255) cGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACgcgc > 2:4036075/1‑150 (MQ=255) gCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCa < 1:134629/150‑1 (MQ=255) cAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCAtt < 2:3229163/150‑1 (MQ=255) cAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCAtt < 2:1636471/150‑1 (MQ=255) gCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa < 1:1579940/150‑1 (MQ=255) gCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa < 1:4625451/150‑1 (MQ=255) gCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa < 2:2294876/150‑1 (MQ=255) cAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAg > 1:4100720/1‑150 (MQ=255) aaaCCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGc > 1:4594257/1‑150 (MQ=255) aCCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCACAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCaa > 2:4114013/1‑150 (MQ=255) aCCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCaa > 2:3286327/1‑150 (MQ=255) ccATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAAc > 2:3069845/1‑150 (MQ=255) cATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACt < 1:561388/150‑1 (MQ=255) tGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTgg < 2:3537223/150‑1 (MQ=255) cTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGaa < 2:484944/150‑1 (MQ=255) gAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAatat < 2:1099841/150‑1 (MQ=255) cgcCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGt > 2:134834/1‑150 (MQ=255) ccTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAACGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGttt > 1:3924440/1‑150 (MQ=255) tGCAAAAGCGAATGAGCTTTGCGCTGGAAAATAAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAg < 1:2502447/150‑1 (MQ=255) cAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCa > 2:748907/1‑150 (MQ=255) aaaGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGa > 2:3785544/1‑150 (MQ=255) gCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAAc < 2:1937360/150‑1 (MQ=255) gCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAAc > 2:2950100/1‑150 (MQ=255) cGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAAcc > 1:766748/1‑150 (MQ=255) gAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAAccc > 1:1916967/1‑150 (MQ=255) aTGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTg > 1:4088658/1‑150 (MQ=255) aTGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTg > 1:1903332/1‑150 (MQ=255) gCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTgcgcg > 2:1183929/1‑150 (MQ=255) cTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTgcgcgc > 2:3058782/1‑150 (MQ=255) cTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTgcgcgc > 1:2710339/1‑150 (MQ=255) gcgcTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAg < 2:2421074/150‑1 (MQ=255) cTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCtt > 2:2813017/1‑150 (MQ=255) tGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCTTa < 1:615569/150‑1 (MQ=255) aaaTCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCTTAgcgc > 2:1845829/1‑150 (MQ=255) tCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCTTAGCGCCAc < 2:626772/150‑1 (MQ=255) | TGGCGATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCTTAGCGCCAC > CP009273/2628438‑2628735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |