| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,062,894 | T→A | 7.0% | V91V (GTA→GTT) | mscS ← | mechanosensitive channel protein, small conductance |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,062,894 | 0 | T | A | 7.0% | 990.9 / 49.4 | 300 | V91V (GTA→GTT) | mscS | mechanosensitive channel protein, small conductance |
| Reads supporting (aligned to +/- strand): ref base T (125/153); new base A (12/9); total (137/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
Only 100 of 302 total aligned reads displayed.
ACGCCGCCCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGATAATCA > CP009273/3062745‑3063042 | aCGCCGCCCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGt > 1:3872368/1‑150 (MQ=255) gccgccCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTac < 2:2989373/150‑1 (MQ=255) cgccCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTacac > 2:3122703/1‑150 (MQ=255) cgccCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTacac < 2:3902455/150‑1 (MQ=255) gccCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACAcc < 2:1433779/150‑1 (MQ=255) gccCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGAACAcc < 2:159771/150‑1 (MQ=255) gccCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGAACAcc < 2:489461/150‑1 (MQ=255) tCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGt > 2:3141034/1‑150 (MQ=255) aaCATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTcc > 1:1488762/1‑150 (MQ=255) cATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGAACACCCACGCGTCCCa < 1:7681/150‑1 (MQ=255) tctcCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCa > 1:4032274/1‑150 (MQ=255) tctcCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCa > 2:222335/1‑150 (MQ=255) ctcCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAg < 2:4497285/150‑1 (MQ=255) ccGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCg > 2:3392827/1‑150 (MQ=255) cGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGc > 1:3392419/1‑150 (MQ=255) cGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGAACACCCACGCGTCCCAGTGCAGCGATTAGc < 2:3307589/150‑1 (MQ=255) ggAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCg > 1:1716309/1‑150 (MQ=255) aaCGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTa > 1:2938960/1‑150 (MQ=255) aCGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTaa < 2:131074/150‑1 (MQ=255) gggCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACCGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAg < 2:2088830/150‑1 (MQ=255) gCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGc < 1:4152231/150‑1 (MQ=255) gCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGc < 2:1935615/150‑1 (MQ=255) cGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCg > 1:488507/1‑150 (MQ=255) ggAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGa > 2:546297/1‑150 (MQ=255) gAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGat < 1:1299286/150‑1 (MQ=255) aaCATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGata > 1:1460060/1‑150 (MQ=255) aaCATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGata < 1:1788505/150‑1 (MQ=255) aCATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGataa < 2:2861689/150‑1 (MQ=255) aCATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGataa < 2:2861503/150‑1 (MQ=255) cATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGataat < 2:2689068/150‑1 (MQ=255) cATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGataat > 1:3792874/1‑150 (MQ=255) aTGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGataata < 1:1185265/150‑1 (MQ=255) aTGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGataata < 1:3649630/150‑1 (MQ=255) gACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATAcc > 2:3575662/1‑150 (MQ=255) cAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGt < 1:1994624/150‑1 (MQ=255) cAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGt > 1:1875578/1‑150 (MQ=255) gTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAAc < 1:2158363/150‑1 (MQ=255) tAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACg < 1:1015010/150‑1 (MQ=255) cacGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGAc > 2:3640489/1‑150 (MQ=255) acGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACt < 1:3075848/150‑1 (MQ=255) ccAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAAt < 2:1472488/150‑1 (MQ=255) aGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGc > 1:701246/1‑150 (MQ=255) ccAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCagaaa > 1:599658/1‑150 (MQ=255) cAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCagaaag < 2:4122749/150‑1 (MQ=255) ggTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCagaaagaa > 2:1795825/1‑150 (MQ=255) tAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAAt > 1:4387253/1‑150 (MQ=255) aCAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTCATGCAGAAAGAAAATCAg > 2:1635061/1‑150 (MQ=255) aCAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAg > 1:2322263/1‑150 (MQ=255) gTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCaa > 2:1986450/1‑150 (MQ=255) tGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAAc > 2:3066224/1‑150 (MQ=255) ccccTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGt > 1:1448898/1‑150 (MQ=255) cccTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTg < 1:1396014/150‑1 (MQ=255) ccTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTgg < 2:3987751/150‑1 (MQ=255) gCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCAt < 2:1368307/150‑1 (MQ=255) aaaGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCg > 2:4218770/1‑150 (MQ=255) aaaGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCg > 1:566390/1‑150 (MQ=255) aaGCCAGACCAACAGCTACGCCTGCGGCACCGAGGACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGa < 2:2226410/150‑1 (MQ=255) aaGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGa > 2:2200994/1‑150 (MQ=255) aGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGAt < 1:2528141/150‑1 (MQ=255) gCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGAtt > 1:352553/1‑150 (MQ=255) ccAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGAttt < 1:828066/150‑1 (MQ=255) cAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGAtttt > 1:3399857/1‑150 (MQ=255) cAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGAtttt < 2:2489625/150‑1 (MQ=255) cAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGAtttt < 2:2489848/150‑1 (MQ=255) aCCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACg < 2:694592/150‑1 (MQ=255) ccAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACgg < 1:4332822/150‑1 (MQ=255) aaCAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGga > 1:2156/1‑150 (MQ=255) aaCAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGga < 1:530263/150‑1 (MQ=255) aCAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGTCGCGGTTTGGACACCCCCGCGTGCCAGTGCAGCGATTTGCGTAATGGCGATAATACCGTAACGGACTATTGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGgat < 2:2421461/150‑2 (MQ=255) aCAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGgag < 1:3453596/150‑1 (MQ=255) aGCTACGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGat < 2:3858540/150‑1 (MQ=255) aGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGat < 1:3171293/150‑1 (MQ=255) aGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGat < 1:156693/150‑1 (MQ=255) cTAAGCCTGCGGCACCGAGTACAGCACTGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGatca < 2:3235264/150‑1 (MQ=255) cTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGc < 1:1074215/150‑1 (MQ=255) gCGGCACCGAGTACAGCAATGACTGACGCGGTTTGAACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGa < 1:4587505/150‑1 (MQ=255) ggCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGAtt > 2:1289325/1‑150 (MQ=255) ggCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGAtt > 1:1641621/1‑150 (MQ=255) gCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTc < 1:618013/150‑1 (MQ=255) aGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACcgcg > 2:4468082/1‑150 (MQ=255) aGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACcgcg < 2:3742813/150‑1 (MQ=255) aGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACcgcg < 2:707988/150‑1 (MQ=255) aGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACcgcg > 2:4311908/1‑150 (MQ=255) cAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTgg > 1:373114/1‑150 (MQ=255) cAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTgg > 1:371632/1‑150 (MQ=255) gCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGaa < 1:3966255/150‑1 (MQ=255) aTGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGAGGCATCGATGTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAatc > 2:2818758/1‑150 (MQ=255) tgactgacGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAatca > 1:390701/1‑150 (MQ=255) gactgacGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTATGGGAGATCATCAGGCGATTCACCGCGTTGGAAatcat > 1:2446066/1‑150 (MQ=255) ctgacGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATcc < 1:96042/150‑1 (MQ=255) ctgacGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATcc > 2:121696/1‑150 (MQ=255) ctgacGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATcc < 1:2555221/150‑1 (MQ=255) gacGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCcgc > 1:335821/1‑150 (MQ=255) gcgGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCcgcgcg < 2:4398492/150‑1 (MQ=255) cgGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGa > 2:837025/1‑150 (MQ=255) ggTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGAt < 1:1883395/150‑1 (MQ=255) gTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGATa > 2:1498844/1‑150 (MQ=255) tttGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGATaa < 2:588156/150‑1 (MQ=255) ttGAACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGATAAt > 1:2748116/1‑150 (MQ=255) gTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGATAATCa < 2:4332916/150‑1 (MQ=255) | ACGCCGCCCAGGTCAACATATTCTCCGGCACGGAACGGGCGGAACATGACAAGTAACACGCCAGCGGCCAGGTTAGACAGTGACCCCTGCAAAGCCAGACCAACAGCTAAGCCTGCGGCACCGAGTACAGCAATGACTGACGCGGTTTGTACACCCACGCGTCCCAGTGCAGCGATTAGCGTAAAGGCGATAATACCGTAACGGACTAATGCAGAAAGAAAATCAGCAACAGTGGCATCGATTTTACGGGAGATCATCAGGCGATTCACCGCGTTGGAAATCATCCGCGCGATAATCA > CP009273/3062745‑3063042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |