| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,190,426 | T→A | 5.2% | T859S (ACC→TCC) | glnE ← | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,190,426 | 0 | T | A | 5.2% | 1028.2 / 34.1 | 305 | T859S (ACC→TCC) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base T (147/142); new base A (10/6); total (157/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 321 total aligned reads displayed.
GCGAAGCGTAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCT > CP009273/3190277‑3190575 | gAAGCGTAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGtaa < 1:3713537/150‑1 (MQ=255) gAAGCGTAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGtaa > 2:1249600/1‑150 (MQ=255) aaGCGTAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGtaat < 2:2869285/150‑1 (MQ=255) cGTAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATaaa < 1:1897996/150‑1 (MQ=255) gTAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGaaataaat < 1:4536452/150‑1 (MQ=255) tAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAAtt > 1:325245/1‑150 (MQ=255) aGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTc < 1:282225/150‑1 (MQ=255) gtgtAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCg < 1:3028120/150‑1 (MQ=255) gtAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGat > 1:1902337/1‑150 (MQ=255) aGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATc > 1:3956724/1‑150 (MQ=255) cACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCgg > 1:599198/1‑150 (MQ=255) gggTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTaa > 2:3058484/1‑150 (MQ=255) gggTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTaa < 2:1326484/150‑1 (MQ=255) cAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTcc > 1:3520623/1‑150 (MQ=255) gcCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCt > 1:2152541/1‑150 (MQ=255) gcCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCt < 2:1616830/150‑1 (MQ=255) ccATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCtt < 2:44755/150‑1 (MQ=255) cATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTtc < 2:3785760/150‑1 (MQ=255) cATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTAGATATCGGTAATTCCCCCTtc > 2:4130804/1‑150 (MQ=255) gCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTtcatca > 2:1388968/1‑150 (MQ=255) gCTTCCTGCTCTTACTTAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGATCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTtcatca < 1:4516128/150‑1 (MQ=255) ttCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGc > 1:1190987/1‑150 (MQ=255) gCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGa < 1:2506971/150‑1 (MQ=255) gCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGa < 1:3756363/150‑1 (MQ=255) ctctTCCATAATGTCTTTTTGCGCCAGTAGTTCCAGAATAAGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGAAGAGCAACACAAGATATTGGGTAATAAATTCGATAACGGTAATTCCCCCATCATCAGCTTTGat > 2:1185888/1‑150 (MQ=255) aTAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAg > 2:4176909/1‑150 (MQ=255) tAATGTCGTTTTGCGCCAGTAGTT‑CAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCg > 2:1570033/1‑150 (MQ=255) aaTGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCg > 2:872058/1‑150 (MQ=255) aaTGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCg > 1:3413353/1‑150 (MQ=255) aTGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGa < 2:1020932/150‑1 (MQ=255) aTGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGa < 2:4001926/150‑1 (MQ=255) tGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGAt < 1:1005923/150‑1 (MQ=255) tttGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGAt > 1:4340275/1‑150 (MQ=255) cgcCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGttt < 2:4423833/150‑1 (MQ=255) gcCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTa > 1:2679397/1‑150 (MQ=255) gcCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTa > 1:240662/1‑150 (MQ=255) gcCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTa < 2:4406958/150‑1 (MQ=255) ccAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTAt < 2:394326/150‑1 (MQ=255) ttCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCgag > 1:1227102/1‑150 (MQ=255) tCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCgaga > 2:2019674/1‑150 (MQ=255) tCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTGTATTGCCgaga > 2:2470373/1‑150 (MQ=255) cAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATg < 1:3902798/150‑1 (MQ=255) cAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATg > 2:3631679/1‑150 (MQ=255) aGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGa > 2:2305973/1‑150 (MQ=255) aGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGa > 1:915850/1‑150 (MQ=255) aGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGAAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGa > 2:3866865/1‑150 (MQ=255) gAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAg < 2:4291407/150‑1 (MQ=255) gCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCa > 2:593251/1‑150 (MQ=255) cGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCAttt > 1:3325389/1‑150 (MQ=255) cGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCAttt > 1:296625/1‑150 (MQ=255) gTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCAtttt < 1:3844224/150‑1 (MQ=255) gTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCAtttt > 2:1125504/1‑150 (MQ=255) ttGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTtc > 1:550298/1‑150 (MQ=255) tGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTtct > 2:2756066/1‑150 (MQ=255) gTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTtctc > 1:1389894/1‑150 (MQ=255) gTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTtctc < 1:1872381/150‑1 (MQ=255) tCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTcg < 1:316308/150‑1 (MQ=255) tCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTcg > 1:790263/1‑150 (MQ=255) cTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTcgc < 2:2262400/150‑1 (MQ=255) aCCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAACTTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCa < 2:2053197/150‑1 (MQ=255) cAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGAAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCAtt > 1:1106314/1‑150 (MQ=255) aGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCAttt < 1:1464972/150‑1 (MQ=255) cTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTc < 1:510880/150‑1 (MQ=255) ggTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGtt > 1:3144938/1‑150 (MQ=255) gTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCAGAGATGAGCGCGCATTTTATCGCGCATTTCCCGCAATTACGttt < 2:57904/150‑1 (MQ=255) ttttCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGc > 1:1550938/1‑150 (MQ=255) ttttCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGc < 2:1719049/150‑1 (MQ=255) tttCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCa < 1:3629106/150‑1 (MQ=255) tCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCaga < 1:1457344/150‑1 (MQ=255) tCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCaga > 2:2671556/1‑150 (MQ=255) tCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCaga < 2:3305639/150‑1 (MQ=255) cATGAGCGTAGCGCAACACCAGATATTGGGTAATAAAGTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCagag > 2:21657/1‑150 (MQ=255) aTGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGt > 2:1714479/1‑150 (MQ=255) tGAGCGTAGCGCAACACCAGATATTGGGAAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGtt > 1:4452090/1‑150 (MQ=255) gAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGttt > 1:6682/1‑150 (MQ=255) gAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGttt > 1:2314581/1‑150 (MQ=255) gAGCGTAGCGCAACACCAGATATTGGGAAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGttt < 2:734355/150‑1 (MQ=255) gCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTa < 2:1486684/150‑1 (MQ=255) gTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTAcc > 2:34842/1‑150 (MQ=255) aGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCtt > 1:149634/1‑150 (MQ=255) aGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCtt > 1:469685/1‑150 (MQ=255) cgcAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCa > 1:3466471/1‑150 (MQ=255) gcAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCAc < 1:4108577/150‑1 (MQ=255) gcAACACCAGATATTGGGAAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCAc < 1:2687828/150‑1 (MQ=255) cAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCAcg > 1:858459/1‑150 (MQ=255) acacCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCAcgcg < 1:218164/150‑1 (MQ=255) acacCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCAcgcg > 2:2241145/1‑150 (MQ=255) ccAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCa < 2:3615718/150‑1 (MQ=255) cAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAg < 2:260699/150‑1 (MQ=255) gATATTGGGTAATAAATTCGATATCGGTAATGCCCCCTTCATCATCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTGACCTTCACGCGGCAGCg > 1:1618056/1‑150 (MQ=255) tatTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTc > 2:4592146/1‑150 (MQ=255) gggTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATaa < 1:2956850/150‑1 (MQ=255) gggAAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATaa > 1:2360020/1‑150 (MQ=255) ggTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAAt < 1:4045489/150‑1 (MQ=255) gTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAAtc > 2:4053333/1‑150 (MQ=255) gTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAAtc > 1:4160946/1‑150 (MQ=255) gTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAAtc > 1:1789265/1‑150 (MQ=255) taataaATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAAtct > 2:3189748/1‑150 (MQ=255) taataaATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAAtct < 1:2617937/150‑1 (MQ=255) taataaATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAAtct > 2:1553819/1‑150 (MQ=255) | GCGAAGCGTAGTGTAAGCACGGGTCAGCGCCATCGCTTCCTGCTCTTCCATAATGTCGTTTTGCGCCAGTAGTTCCAGAATACGCACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCT > CP009273/3190277‑3190575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |