| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,330,426 | Δ1 bp | 100% | intergenic (‑88/+111) | adiA ← / ← melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,330,426 | 0 | T | . | 96.7% | 1310.8 / 24.7 | 273 | intergenic (‑88/+111) | adiA/melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base . (136/128); total (140/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 291 total aligned reads displayed.
CGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTT > CP009273/4330278‑4330575 | ggCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACATTTAATACTTTCATCATTGCTTACCCGGTTATGATGGAATCTTCGTTGCGGGCATGTATCTTCCGACCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttt < 2:2684276/150‑1 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttg < 2:4612005/150‑2 (MQ=255) ttACCGACCCAGGTGTCTTGATGGAGTAACTCGCTTTCAAAAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaa < 1:28572/150‑4 (MQ=255) ttACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaa > 2:2822391/1‑147 (MQ=255) ccGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAata < 2:3866704/150‑1 (MQ=255) cGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAatat < 1:4221373/150‑1 (MQ=255) gACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATAtt < 1:1151053/150‑1 (MQ=255) cccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTa < 1:1079519/150‑1 (MQ=255) cccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTa > 1:1278781/1‑150 (MQ=255) cAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCAGTTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGt < 1:905835/150‑1 (MQ=255) aGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGtt > 2:3896596/1‑150 (MQ=255) ggTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGttt < 2:1102375/150‑1 (MQ=255) ggTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGttt > 1:480599/1‑150 (MQ=255) tgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTta < 1:4572519/150‑1 (MQ=255) tCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTtata < 2:1068151/150‑1 (MQ=255) tCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTtata < 1:1296478/150‑1 (MQ=255) cTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATaa < 2:151459/150‑1 (MQ=255) cTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATaa > 1:2768930/1‑150 (MQ=255) tGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAAc < 2:3743555/150‑1 (MQ=255) gATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACa < 1:1360843/150‑1 (MQ=255) ggAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATa < 1:710798/150‑1 (MQ=255) ggAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATa < 2:2391835/150‑1 (MQ=255) gagaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATAc < 2:4356318/150‑1 (MQ=255) aaaCTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGtt > 1:3554365/1‑150 (MQ=255) aaCTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTa < 2:3097069/150‑1 (MQ=255) aCTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAt < 1:513987/150‑1 (MQ=255) cTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtg > 2:170943/1‑150 (MQ=255) cTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtg > 1:3713166/1‑150 (MQ=255) cTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtg < 1:3186722/150‑1 (MQ=255) cGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtgtg > 2:2189549/1‑150 (MQ=255) cTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGat > 2:1792506/1‑150 (MQ=255) caacaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGattatt > 1:3382819/1‑150 (MQ=255) caaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTa < 1:42697/150‑1 (MQ=255) aTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaaa > 1:2824777/1‑150 (MQ=255) tAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatt > 2:3698524/1‑150 (MQ=255) tACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattatt < 1:3264656/150‑1 (MQ=255) tttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTc < 1:3906948/150‑1 (MQ=255) ttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCa < 1:2711455/150‑1 (MQ=255) catTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCt > 2:3070473/1‑150 (MQ=255) catTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCt > 2:4200114/1‑150 (MQ=255) catTCCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCt > 2:872229/1‑150 (MQ=255) ttGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt < 2:1275540/150‑1 (MQ=255) cTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatta > 1:991261/1‑150 (MQ=255) cTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatta < 1:1353834/150‑1 (MQ=255) cTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatta < 1:1444806/150‑1 (MQ=255) cTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatta < 2:2509595/150‑1 (MQ=255) tACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATc < 1:2158123/150‑1 (MQ=255) tACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATc < 1:1884053/150‑1 (MQ=255) tACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATc < 2:2365894/150‑1 (MQ=255) cccGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGTGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGa > 1:2567552/1‑150 (MQ=255) cGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGAc > 2:1057333/1‑150 (MQ=255) cGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACg > 2:1789650/1‑150 (MQ=255) cGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACg < 2:898982/150‑1 (MQ=255) ggTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATCATTTTCACTGCTTATTATCGACgg > 1:831240/1‑150 (MQ=255) gTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGc > 1:1550160/1‑150 (MQ=255) gTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGc > 1:4031966/1‑150 (MQ=255) tATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTa > 1:939483/1‑150 (MQ=255) gAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAAc < 1:1490090/150‑1 (MQ=255) aaGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGCTTATTTTAAATTATTTTCTCTGGTTATTTTCGTCGGCTATAc > 1:2438282/1‑150 (MQ=255) gAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAtt < 1:567569/150‑1 (MQ=255) gAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAtt < 2:3499959/150‑1 (MQ=255) aaTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt > 2:701738/1‑150 (MQ=255) gTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGc > 2:535753/1‑150 (MQ=255) gggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgata > 2:2137809/1‑150 (MQ=255) ggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATACACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatac < 1:19664/150‑1 (MQ=255) gCAAGTATCTTCCGGCCTTTTCGGGCTGTATAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAATCAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatact < 1:1939118/150‑1 (MQ=255) gCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatact < 2:4008276/150‑1 (MQ=255) gCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatact > 1:3461806/1‑150 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga > 1:404453/1‑150 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga > 1:1715805/1‑150 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga > 2:1658073/1‑150 (MQ=255) aGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat > 2:291274/1‑150 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat < 1:3050376/150‑1 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat > 2:446003/1‑150 (MQ=255) aTCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat < 2:4562043/150‑1 (MQ=255) aTCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATc > 1:3278916/1‑150 (MQ=255) aTCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATc > 1:3846477/1‑150 (MQ=255) ttCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTc > 1:1786562/1‑150 (MQ=255) cTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGcc > 2:154461/1‑150 (MQ=255) cTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGcc < 1:2545562/150‑1 (MQ=255) ttCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCggg < 1:3443641/150‑1 (MQ=255) ttCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCggg < 1:4500272/150‑1 (MQ=255) ttCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCggg < 2:4160897/150‑1 (MQ=255) gggCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGaaa > 1:4178209/1‑150 (MQ=255) gCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACg < 2:4064053/150‑1 (MQ=255) tGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTc > 2:3390328/1‑150 (MQ=255) tAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTg < 2:3249939/150‑1 (MQ=255) aaGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggc < 2:4599386/150‑1 (MQ=255) aGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcg > 2:4323262/1‑150 (MQ=255) cgcgTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcggc > 1:3531072/1‑150 (MQ=255) gAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGt > 2:1384671/1‑150 (MQ=255) aaacaaacA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGACACGTCTGGCGGCGCTGTTgg > 2:3010668/1‑150 (MQ=255) aacaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGc < 2:277423/150‑1 (MQ=255) acaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATTTTATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGACTGGCGGCGCTGTTGGCt > 2:2035349/1‑150 (MQ=255) acaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCt > 1:2061770/1‑150 (MQ=255) acaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCt > 1:2818848/1‑150 (MQ=255) caaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTa > 1:1530705/1‑150 (MQ=255) caaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTa > 2:2579025/1‑150 (MQ=255) caaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTa > 1:365201/1‑150 (MQ=255) tttttGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTACACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGttt < 1:3827404/150‑1 (MQ=255) | CGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTT > CP009273/4330278‑4330575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |