| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,335,651 | C→A | 49.8% | S7* (TCG→TAG) | kdsC → | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,335,651 | 0 | C | A | 49.8% | 122.5 / inf | 251 | S7* (TCG→TAG) | kdsC | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (63/63); new base A (59/66); total (122/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 251 total aligned reads displayed.
ACTGAACTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAATGTT > CP009273/3335503‑3335799 | aCTGAACTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCg < 2:275851/150‑1 (MQ=255) cTGAACTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGc < 1:3132599/150‑1 (MQ=255) aCTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGc > 2:4545105/1‑150 (MQ=255) cTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCg > 2:1395124/1‑150 (MQ=255) cTTAATGCAGTCCCGCCATATCACCACAGTGAAGTTTGCCGATGGCGACCATTTACTCGGTGTGAGACATAAGCCTCATTTACTGCGTGCAGGCGTAGTGTAAAGATTCACGGAAAAACAACAATGAGCAAAGCAGGAGCGTAGCTAGCg > 2:4165988/1‑150 (MQ=255) ttAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGa < 2:1511487/150‑1 (MQ=255) ttAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGa < 2:1511573/150‑1 (MQ=255) aGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTa > 1:1416615/1‑150 (MQ=255) gTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTAc < 2:3606728/150‑1 (MQ=255) tCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACg < 2:4183451/150‑1 (MQ=255) tCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACg > 2:1376807/1‑150 (MQ=255) cGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGcc > 2:3332091/1‑150 (MQ=255) gCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGccc > 2:246784/1‑150 (MQ=255) atCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCa > 1:1514053/1‑150 (MQ=255) cTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGcc > 2:3064998/1‑150 (MQ=255) cGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGAc < 1:2002854/150‑1 (MQ=255) tGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGt > 1:3510355/1‑150 (MQ=255) gATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGtt > 1:2537636/1‑150 (MQ=255) gATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGtt < 1:50240/150‑1 (MQ=255) gTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAg < 1:3815275/150‑1 (MQ=255) ttGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGc > 2:1035770/1‑150 (MQ=255) tGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCa > 1:1532837/1‑150 (MQ=255) cGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCaaaa > 2:1145243/1‑150 (MQ=255) cGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCaaaa > 1:1194385/1‑150 (MQ=255) gATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAATATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAg > 2:806623/1‑150 (MQ=255) aTGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGc < 2:2560913/150‑1 (MQ=255) aTGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGc > 2:1647632/1‑150 (MQ=255) aTGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGc < 1:622733/150‑1 (MQ=255) tGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCa < 1:1088191/150‑1 (MQ=255) cGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCagag < 2:625625/150‑1 (MQ=255) gACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAgaga > 1:2821797/1‑150 (MQ=255) aCCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGaa > 1:580040/1‑150 (MQ=255) ccATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAAc < 1:3255275/150‑1 (MQ=255) ccATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAAc > 2:76294/1‑150 (MQ=255) cATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACa < 1:4182872/150‑1 (MQ=255) tttACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACAtt < 1:2977564/150‑1 (MQ=255) ttACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTc > 1:4634080/1‑150 (MQ=255) ttACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTc < 1:1787819/150‑1 (MQ=255) tACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCg > 2:1979283/1‑150 (MQ=255) tACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCg > 2:3857764/1‑150 (MQ=255) aCTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGt > 1:1092233/1‑150 (MQ=255) cGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTctg > 2:4019881/1‑150 (MQ=255) gtgtgtTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTctgct > 2:4480269/1‑150 (MQ=255) gtgtgtTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTctgct < 1:4555626/150‑1 (MQ=255) gtTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATc < 1:4425071/150‑1 (MQ=255) ttACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATcc > 2:3468/1‑150 (MQ=255) tACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCt < 1:1597437/150‑1 (MQ=255) aCATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtc < 2:2394143/150‑1 (MQ=255) aCATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtc < 2:912976/150‑1 (MQ=255) atatGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcga < 1:1035456/150‑1 (MQ=255) gCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcgatgtc < 1:4109749/150‑1 (MQ=255) gCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcgatgtc < 2:2124322/150‑1 (MQ=255) gCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcgatgtc < 1:3570373/150‑1 (MQ=255) cATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcgatgtcg > 1:2164446/1‑150 (MQ=255) cATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcgatgtcg > 1:3603281/1‑150 (MQ=255) tGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcgatgtcgat > 1:696809/1‑150 (MQ=255) gATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCtcgatgtcgatg > 2:1920586/1‑150 (MQ=255) tttACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGc < 1:1389480/150‑1 (MQ=255) ttACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTGATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCg > 2:4386243/1‑150 (MQ=255) tGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACt > 2:2904921/1‑150 (MQ=255) gCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTg < 1:1879535/150‑1 (MQ=255) gCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTg < 2:3549380/150‑1 (MQ=255) gTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTc > 1:4489768/1‑150 (MQ=255) aGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGAt > 2:2291709/1‑150 (MQ=255) aGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGAt > 1:1292678/1‑150 (MQ=255) tAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCt < 2:4599877/150‑1 (MQ=255) tAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCt < 1:3215240/150‑1 (MQ=255) tAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCt < 1:288036/150‑1 (MQ=255) tAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCt < 1:22983/150‑1 (MQ=255) aGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTg > 2:2059962/1‑150 (MQ=255) tgtAAAGATTCAAGGATAAACAACACTGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGAt < 2:909100/150‑1 (MQ=255) tgtAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGAt > 1:103655/1‑150 (MQ=255) tgtAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGAt > 2:2507047/1‑150 (MQ=255) tAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGAttt < 1:2768757/150‑1 (MQ=255) aaaGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGACGATGGCGTACTGTCAGATGGCCTGATTta > 2:1820152/1‑150 (MQ=255) aaGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTtat > 1:3893015/1‑150 (MQ=255) aaGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTtat < 1:3295358/150‑1 (MQ=255) ttCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATgg < 1:3243578/150‑1 (MQ=255) cAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGc < 2:2849862/150‑1 (MQ=255) cAAGGATAAACAACAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATACTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGc > 2:2340169/1‑150 (MQ=255) aTAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCaataa < 1:2040898/150‑1 (MQ=255) aacaacAATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATgg < 1:4429365/150‑1 (MQ=255) acaacaATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGc < 1:4240365/150‑1 (MQ=255) acaacaATGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGc < 1:189332/150‑1 (MQ=255) caacaaTGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCg < 2:2920003/150‑1 (MQ=255) caaTGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAag < 2:157999/150‑1 (MQ=255) aaTGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAaga > 1:978697/1‑150 (MQ=255) aaTGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAaga < 2:1532837/150‑1 (MQ=255) aaTGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAaga < 2:3021926/150‑1 (MQ=255) aaTGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAaga > 2:942577/1‑150 (MQ=255) aTGAGCAAAGCAGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAagag < 1:3986635/150‑1 (MQ=255) tGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGc > 2:3661387/1‑150 (MQ=255) gCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGa < 2:3176363/150‑1 (MQ=255) aGCAGGTGCGTCGCTTGCGACCTGGTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGc < 2:4063068/150‑1 (MQ=255) aGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGtt > 2:694561/1‑150 (MQ=255) aGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGtt < 2:3939061/150‑1 (MQ=255) aGGTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGtt < 2:2537636/150‑1 (MQ=255) ggTGCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTc < 1:2566828/150‑1 (MQ=255) gCGTAGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAAt < 2:1416615/150‑1 (MQ=255) gTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAATGt > 2:2191430/1‑150 (MQ=255) | ACTGAACTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAAAGATTCAAGGATAAACAACAATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAATGTT > CP009273/3335503‑3335799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |