| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,437,638 | G→T | 14.6% | G87G (GGC→GGA) | rplO ← | 50S ribosomal subunit protein L15 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,437,638 | 0 | G | T | 14.6% | 939.3 / 87.2 | 288 | G87G (GGC→GGA) | rplO | 50S ribosomal subunit protein L15 |
| Reads supporting (aligned to +/- strand): ref base G (126/119); new base T (24/19); total (150/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 292 total aligned reads displayed.
GCTTCGATAGCAGCACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTCTG > CP009273/3437489‑3437787 | gcTTCGATAGCAGCACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCg > 2:133826/1‑150 (MQ=255) tCGATAGCAGCACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCt < 1:3764968/150‑1 (MQ=255) gATAGCAGCACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTc < 2:1447712/150‑1 (MQ=255) cagcaCGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACtt > 1:730559/1‑150 (MQ=255) aCGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACATCGCCAGCCAGGATCACTTTAGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGc > 1:1986061/1‑150 (MQ=255) cGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGcc < 1:3203809/150‑1 (MQ=255) cGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGcc > 2:3606574/1‑150 (MQ=255) cGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGcc > 2:186963/1‑150 (MQ=255) gAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCa > 2:1170044/1‑150 (MQ=255) aGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAg < 2:3437447/150‑1 (MQ=255) gcgcCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAgg < 2:207466/150‑1 (MQ=255) gcgcCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAgg < 2:4045105/150‑1 (MQ=255) cTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTcag < 1:190466/150‑1 (MQ=255) tttAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTcaga < 2:2002630/150‑1 (MQ=255) aGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTcagacag > 2:2222025/1‑150 (MQ=255) tAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCagacagac > 1:3677291/1‑150 (MQ=255) acacGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGa > 2:2319627/1‑150 (MQ=255) acacGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGa > 2:3270984/1‑150 (MQ=255) acGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAAt > 2:1749507/1‑150 (MQ=255) cGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGGCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAAtt > 2:3087679/1‑150 (MQ=255) gCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAAttt < 2:4449179/150‑1 (MQ=255) ggCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCgg < 1:1969531/150‑1 (MQ=255) ggCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCgg < 1:4299398/150‑1 (MQ=255) gCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGc < 1:3327436/150‑1 (MQ=255) gCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGc < 1:1040864/150‑1 (MQ=255) cGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTa < 1:979827/150‑1 (MQ=255) aCAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATc < 1:1224347/150‑1 (MQ=255) gTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCgct < 1:950627/150‑1 (MQ=255) tACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCgctgc > 2:4085598/1‑150 (MQ=255) aCCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCgctgct > 2:637798/1‑150 (MQ=255) ccGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCtt > 2:3467092/1‑150 (MQ=255) cGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCttt < 1:1541261/150‑1 (MQ=255) gAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTAc < 1:2668984/150‑1 (MQ=255) gAGTCGTTACTTCGCCAGCCAGGATAACTTTCGCGAACTCGATCTGGATACCGATAAATTTAGCCGCATTCAGCGTGTTCAGGTCTACTACACCGCCTACTACTTAAGCCAGGTCAGACCGACGAATATCGGCTGTAATCGCTGCTTAAc > 2:2915718/1‑150 (MQ=255) aGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACg > 1:3331541/1‑150 (MQ=255) aGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACg > 1:2085441/1‑150 (MQ=255) gTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACga > 1:3516522/1‑150 (MQ=255) gTCGTTAATTCGCAAGCCAGGATCACTTTCGCGAACTCGATCTGGATAACGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTATACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTaata > 1:418283/1‑147 (MQ=255) tCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACgag > 1:3870401/1‑150 (MQ=255) cGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACgaga > 2:4567483/1‑150 (MQ=255) ttACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAg > 1:1100703/1‑150 (MQ=255) tACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGt < 1:2101954/150‑1 (MQ=255) aCTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTg < 2:333171/150‑1 (MQ=255) cTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGa < 1:435175/150‑1 (MQ=255) cTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGa < 1:2752862/150‑1 (MQ=255) ttCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGaa > 2:3950760/1‑150 (MQ=255) tCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAg < 1:348056/150‑1 (MQ=255) tCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAg < 1:3159376/150‑1 (MQ=255) gccagccaGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGcc < 1:611883/150‑1 (MQ=255) ttccagGATAACTTTCTCGAAATCGATCTTGATACCGATAATGTTTGCCGTTTTCAGAGTGTTCAGGTCTAATACACCGCCTTCTACTTTAGCAAGGTCTGTCATACGATTTTAGGATGTAATCGCTGCTTTACGAGAAGTGAAGCCGaa < 1:220434/148‑1 (MQ=255) agccagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTCCTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGaa < 2:1776469/150‑1 (MQ=255) agccagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGaa > 2:4091618/1‑150 (MQ=255) cagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAAttt > 1:2160548/1‑150 (MQ=255) agGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTc > 2:78895/1‑150 (MQ=255) agGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTc > 2:863897/1‑150 (MQ=255) agGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTCCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTc < 1:3920914/150‑1 (MQ=255) ggATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCg > 1:801792/1‑150 (MQ=255) ggATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCg > 1:509537/1‑150 (MQ=255) ggATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCg < 1:422639/150‑1 (MQ=255) aCTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAga < 1:132799/150‑1 (MQ=255) ttCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacga < 2:2178840/150‑1 (MQ=255) cgagAACTCGATCTGGATACCGATAATGTGAGCCGCTTTCAGCGTGTTAAGTTCTACTACACCGGCTTCTTCTTTAGCCAGGTCAGACAGACGAATTTCGGGTGTAATCGATTCTTTTCGAGAAGTGAAGCCGTTTTTCGTATGacgacg < 2:1547393/147‑1 (MQ=255) gcgAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACgg > 1:4304654/1‑150 (MQ=255) cgAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGt > 1:3508623/1‑150 (MQ=255) gAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTa > 2:2571887/1‑150 (MQ=255) aaCTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTAc < 1:238755/150‑1 (MQ=255) aCTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACa > 1:2976922/1‑150 (MQ=255) gATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAgg > 2:2596068/1‑150 (MQ=255) gATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAgg > 2:1058401/1‑150 (MQ=255) gATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCACTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAgg > 1:3842772/1‑150 (MQ=255) aTCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGc > 1:2790836/1‑150 (MQ=255) tGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATc > 1:972094/1‑150 (MQ=255) aTACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGa < 2:2491045/150‑1 (MQ=255) aCCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGacc < 2:2769522/150‑1 (MQ=255) cGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccac < 1:687928/150‑1 (MQ=255) gATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccacc > 2:608578/1‑150 (MQ=255) gATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccacc > 1:4638676/1‑150 (MQ=255) aTAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCAccc < 2:3613144/150‑1 (MQ=255) tAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCt > 2:4504117/1‑150 (MQ=255) aaTGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTc < 1:4069890/150‑1 (MQ=255) aaTGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTc < 2:777828/150‑1 (MQ=255) tAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAAc < 1:2494364/150‑1 (MQ=255) tAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAAc > 2:3227541/1‑150 (MQ=255) cGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcgcg > 2:834570/1‑150 (MQ=255) aGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACg > 1:1636152/1‑150 (MQ=255) aGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACg > 1:3724419/1‑150 (MQ=255) gCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGc > 2:4234422/1‑150 (MQ=255) cGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGcc > 1:2573946/1‑150 (MQ=255) cGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGcc > 1:3096029/1‑150 (MQ=255) tCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGc > 2:3401443/1‑150 (MQ=255) cAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGcc > 2:3736679/1‑150 (MQ=255) gTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGa < 1:3606574/150‑1 (MQ=255) tactacACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACg < 2:1957165/150‑1 (MQ=255) tactacACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACg < 2:543909/150‑1 (MQ=255) tacACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACgaga > 2:2210103/1‑150 (MQ=255) cacCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACt < 1:3253453/150‑1 (MQ=255) cacCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACt > 1:2263015/1‑150 (MQ=255) acCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACtt > 1:1257007/1‑150 (MQ=255) ccGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTc < 1:1392405/150‑1 (MQ=255) gCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTCTg < 2:3869797/150‑1 (MQ=255) | GCTTCGATAGCAGCACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTCTG > CP009273/3437489‑3437787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |