| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,442,244 | C→A | 30.6% | L95F (TTG→TTT) | rplP ← | 50S ribosomal subunit protein L16 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,442,244 | 0 | C | A | 30.6% | 583.9 / 233.6 | 290 | L95F (TTG→TTT) | rplP | 50S ribosomal subunit protein L16 |
| Reads supporting (aligned to +/- strand): ref base C (92/109); new base A (47/42); total (139/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 292 total aligned reads displayed.
CTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCG > CP009273/3442095‑3442391 | gCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGc > 2:3275427/1‑150 (MQ=255) cAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCa < 2:176346/150‑1 (MQ=255) cAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCa < 1:4549898/150‑1 (MQ=255) aGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCaa < 2:1720534/150‑1 (MQ=255) ctTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCa > 1:4608340/1‑150 (MQ=255) ttttGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCaa < 1:3670252/150‑1 (MQ=255) ttGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATa < 2:836173/150‑1 (MQ=255) tGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATAc < 2:1484928/150‑1 (MQ=255) tcTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACt > 2:896130/2‑150 (MQ=255) cATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACg < 1:623874/150‑1 (MQ=255) cATTACATCACCGTCTTAGTTACAAAGGCGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACg < 1:1503732/150‑1 (MQ=255) aTTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGt > 2:3530096/1‑150 (MQ=255) ttACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGtt > 2:2540011/1‑150 (MQ=255) tACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGtta > 2:2190577/1‑150 (MQ=255) aTCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGttacct < 2:1373894/150‑1 (MQ=255) aTCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGttacct < 1:2232736/150‑1 (MQ=255) tCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGttacctt < 2:2625030/150‑1 (MQ=255) tCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGttacctt < 2:3622073/150‑1 (MQ=255) ccGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGttacctttac > 2:1556958/1‑150 (MQ=255) cGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGttacctttacc < 2:1041932/150‑1 (MQ=255) tAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACctttacctttac > 1:1162194/1‑150 (MQ=255) tAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACctttacctttac > 2:507808/1‑150 (MQ=255) aGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCtttacctttacc < 2:2145674/150‑1 (MQ=255) aGTTACAAAGGTGGTTTTAATCGGCAGATTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCttaacctttacc > 1:1683980/1‑150 (MQ=255) gTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTAccc > 2:402024/1‑150 (MQ=255) aCAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATa < 1:739391/150‑1 (MQ=255) aaGGTGTTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGc > 1:1852654/1‑150 (MQ=255) aaGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGc > 1:3211470/1‑150 (MQ=255) aaGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGc > 2:1212841/1‑150 (MQ=255) aGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCa > 2:2940334/1‑150 (MQ=255) ggtggtTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCAc < 1:2015973/150‑1 (MQ=255) gtggtTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACt > 1:3388807/1‑150 (MQ=255) gtggtTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACt > 2:1233077/1‑150 (MQ=255) gtggtTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACt > 2:4176649/1‑150 (MQ=255) gtggtTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACt < 2:209025/150‑1 (MQ=255) gtggtTGTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACt > 1:3111208/1‑150 (MQ=255) ttttAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCa > 2:2757411/1‑150 (MQ=255) ttttAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCa > 2:1696511/1‑150 (MQ=255) ttAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGc < 1:2282027/150‑1 (MQ=255) tAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCg < 2:2012997/150‑1 (MQ=255) aaTCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTATCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCgg > 1:705333/1‑150 (MQ=255) tCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCt > 2:4632082/1‑150 (MQ=255) tCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCt > 2:2448325/1‑150 (MQ=255) cGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCtt > 1:1396073/1‑150 (MQ=255) ggCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCttt > 1:1633313/1‑150 (MQ=255) gCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCtttt < 1:2675152/150‑1 (MQ=255) aGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCa > 2:3146010/1‑150 (MQ=255) gTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAg > 2:133653/1‑150 (MQ=255) ttCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTg > 1:24700/1‑150 (MQ=255) cGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGAt > 1:1258223/1‑150 (MQ=255) cGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGAt < 2:2740132/150‑1 (MQ=255) gctgctGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATc < 2:2702957/150‑1 (MQ=255) gctgctGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATc > 1:851394/1‑150 (MQ=255) gctgctGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATc < 2:1125843/150‑1 (MQ=255) gctgcCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAAAACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGt > 2:4251730/1‑150 (MQ=255) tgcCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGACTCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGttt < 1:3693802/150‑1 (MQ=255) gcCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACTCCGTCCATTTCATACAGGACTTTACCCTGCTGAATAAAGGCAACCCAATACTCAACGTTACATTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTg < 1:989811/150‑1 (MQ=255) gcCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTg > 2:2323233/1‑150 (MQ=255) gcCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTg > 1:2363059/1‑150 (MQ=255) gcCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTg < 2:3009796/150‑1 (MQ=255) aGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTcc < 2:1922313/150‑1 (MQ=255) aGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTcc > 2:2222225/1‑150 (MQ=255) aaTGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAac > 1:2886091/1‑150 (MQ=255) aTGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAaca < 2:1617715/150‑1 (MQ=255) tGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAacac > 1:2977266/1‑150 (MQ=255) cTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACGGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAacacac < 2:243510/150‑1 (MQ=255) ttCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATCCTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACg < 2:739906/150‑1 (MQ=255) gggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATcc < 1:2164629/150‑1 (MQ=255) gggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATcc < 1:3455493/150‑1 (MQ=255) gggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATcc < 1:3602797/150‑1 (MQ=255) ggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCa > 1:1002888/1‑150 (MQ=255) ggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCa > 2:4480917/1‑150 (MQ=255) ggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCa < 2:248406/150‑1 (MQ=255) ggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCa > 1:3876659/1‑150 (MQ=255) ggCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCa < 2:383184/150‑1 (MQ=255) gCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAg < 2:662061/150‑1 (MQ=255) cAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGAt > 1:2165702/1‑150 (MQ=255) aGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATc > 2:2964271/1‑150 (MQ=255) ctctTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCtt < 1:3993196/150‑1 (MQ=255) ctTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGTATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTAc < 2:3082759/150‑1 (MQ=255) ctTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTAc > 2:2873838/1‑150 (MQ=255) ccGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCtt < 1:4177444/150‑1 (MQ=255) ccGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCtt < 2:3555300/150‑1 (MQ=255) aaCACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACg < 2:2402219/150‑1 (MQ=255) ccGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTa < 1:797568/150‑1 (MQ=255) gTCCATTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAAc > 1:2640651/1‑150 (MQ=255) tCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACt < 1:3761519/150‑1 (MQ=255) ccATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTg > 2:4372960/1‑150 (MQ=255) aTTTCATACAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCa < 2:795194/150‑1 (MQ=255) aCAGGCCTTTACCCGGCTGAATCTTGGCAACCCTATACTCCACGTTACCTTTACCTTTAGCCAGTCGCACTTCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACTCACGGTTCCAGATCTTACCTTGACGCTTAACTGCACGGGTCa < 1:3017092/150‑1 (MQ=255) aCAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCa < 2:39150/150‑1 (MQ=255) aCAGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCa < 2:3987203/150‑1 (MQ=255) aGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATa < 1:3294042/150‑1 (MQ=255) aGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATa < 2:3479410/150‑1 (MQ=255) aGGACTTTACCCGGCTGAATAAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATa > 1:2961537/1‑150 (MQ=255) gACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGc > 1:542141/1‑150 (MQ=255) gACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGc > 2:720330/1‑150 (MQ=255) cccGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGt < 1:2526010/150‑1 (MQ=255) gCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGtgctg < 1:1599612/150‑1 (MQ=255) aTCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCg < 2:568591/150‑1 (MQ=255) | CTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCATACAGGACTTTACCCGGCTGAATCAAGGCAACCCAATACTCCACGTTACCTTTACCTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCG > CP009273/3442095‑3442391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |