| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,457,896 | C→A | 55.8% | P206T (CCT→ACT) | gspL → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,457,896 | 0 | C | A | 55.8% | 4.7 / inf | 313 | P206T (CCT→ACT) | gspL | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base C (74/64); new base A (85/90); total (159/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01 | |||||||||||
Only 100 of 313 total aligned reads displayed.
TGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGTTCTCGCC > CP009273/3457749‑3458042 | tGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCt < 1:3863424/150‑1 (MQ=255) gCTCATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGa < 2:1882062/150‑1 (MQ=255) tCATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTTGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCGTTGATATGGTGTAGAACCTCACGTCGTTGCAGCGGCCAATCCACTTATCCAGCAAACTGaaa > 1:3042802/1‑150 (MQ=255) cATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAAt > 1:1277222/1‑150 (MQ=255) aTTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATa > 1:2152804/1‑150 (MQ=255) gCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCAt < 2:4228721/150‑1 (MQ=255) aGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCa < 2:2486254/150‑1 (MQ=255) aGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCa > 2:4144703/1‑150 (MQ=255) aGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCa < 1:3880795/150‑1 (MQ=255) gCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTg < 1:1672267/150‑1 (MQ=255) ccGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGa > 1:1187651/1‑150 (MQ=255) cGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAg < 1:2725621/150‑1 (MQ=255) cacaTGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGtt < 2:4029499/150‑1 (MQ=255) ccTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTAtt > 1:310548/1‑150 (MQ=255) ttCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCt < 1:4595273/150‑1 (MQ=255) ttCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCt < 1:2601418/150‑1 (MQ=255) tCAACGAACTGGATGAACACTGATTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTg < 2:3362446/150‑1 (MQ=255) aaCGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGcc > 2:2340409/1‑150 (MQ=255) aCGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCg > 2:610865/1‑150 (MQ=255) cGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGa > 1:2799453/1‑150 (MQ=255) cGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGa > 1:286791/1‑150 (MQ=255) aaCTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGata < 1:4199259/150‑1 (MQ=255) cTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATAtt > 2:1267859/1‑150 (MQ=255) tGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTg < 2:381261/150‑1 (MQ=255) ggATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATCTTGc > 2:1595653/1‑150 (MQ=255) acacTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCa < 1:3734405/150‑1 (MQ=255) acacTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCa < 1:3823759/150‑1 (MQ=255) cTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAgcg < 1:3917874/150‑1 (MQ=255) ggTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCt > 1:3263078/1‑150 (MQ=255) ttACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTAt > 2:4639147/1‑150 (MQ=255) tACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATg < 2:3293674/150‑1 (MQ=255) aCAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGa < 1:1002343/150‑1 (MQ=255) aCAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGa > 1:2098861/1‑150 (MQ=255) cAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTGTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGAc > 2:849575/1‑150 (MQ=255) gCATCTTGCTGCCCAGTTTCCGCCTGAGAATTTGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAt < 2:1332439/150‑1 (MQ=255) gCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAt > 2:2469762/1‑150 (MQ=255) gCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAt < 2:1313719/150‑1 (MQ=255) gCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAt > 2:2214766/1‑150 (MQ=255) gCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAt < 2:3380616/150‑1 (MQ=255) cATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAtg < 2:4304939/150‑1 (MQ=255) cATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAtg < 2:783150/150‑1 (MQ=255) aTCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACAtgc > 2:2181055/1‑150 (MQ=255) tctgcCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCAt < 2:1580753/149‑1 (MQ=255) gctgcCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCAt < 1:3027191/150‑1 (MQ=255) gcCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGt < 1:14066/150‑1 (MQ=255) aGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTAttt > 2:2653485/1‑150 (MQ=255) aGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTAttt < 1:3395774/150‑1 (MQ=255) tCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCg > 1:606800/1‑150 (MQ=255) ccGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGt > 1:942641/1‑150 (MQ=255) cGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTa > 1:4140396/1‑150 (MQ=255) gCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTaa < 2:2548714/150‑1 (MQ=255) gCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTaa < 2:3482751/150‑1 (MQ=255) ccTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTaaa > 1:1384135/1‑150 (MQ=255) ccTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATACCAGCGCTATGACATGCTGCATGGTATTTTTCGTaaa > 1:3732832/1‑150 (MQ=255) gagaATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAg < 2:4127361/150‑1 (MQ=255) gaATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGaa < 2:1489866/150‑1 (MQ=255) gaATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGaa > 1:2639448/1‑150 (MQ=255) gaATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGaa < 2:743041/150‑1 (MQ=255) aaTATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGaaa > 2:4388564/1‑150 (MQ=255) aaTATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGaaa > 2:92110/1‑150 (MQ=255) tatGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAAc > 2:2011131/1‑150 (MQ=255) tatGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAAc > 2:3637420/1‑150 (MQ=255) cTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTa < 2:2843540/150‑1 (MQ=255) cTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTa > 2:1456217/1‑150 (MQ=255) tttGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTaa > 2:3402554/1‑150 (MQ=255) tttGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTaa > 1:3478133/1‑150 (MQ=255) ttGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAg < 2:4482575/150‑1 (MQ=255) gTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCa < 2:2876601/150‑1 (MQ=255) aTGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAAt > 1:2246929/1‑150 (MQ=255) ggTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCg < 1:741962/150‑1 (MQ=255) gtgtAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCgg > 2:4563516/1‑150 (MQ=255) agtaCCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGaaa > 1:2372200/1‑150 (MQ=255) taCCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAAt > 1:2569993/1‑150 (MQ=255) cTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGc > 2:1721850/1‑150 (MQ=255) cTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGc > 1:481842/1‑150 (MQ=255) cACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTc < 1:3536085/150‑1 (MQ=255) ggCGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTcgcc < 1:364044/150‑1 (MQ=255) cGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTcgcccg > 2:1201749/1‑150 (MQ=255) cGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTcgcccg < 2:3786125/150‑1 (MQ=255) cGTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTcgcccg > 2:238376/1‑150 (MQ=255) gTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTcgcccgc > 2:3590928/1‑150 (MQ=255) gTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTcgcccgc < 1:2300724/150‑1 (MQ=255) gTTGCAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTcgcccgc > 1:838810/1‑150 (MQ=255) gCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTg < 1:249976/150‑1 (MQ=255) cAGCGGCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTgg > 1:3886501/1‑150 (MQ=255) ggCCAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGt < 2:2587629/150‑1 (MQ=255) ccAATCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTaa < 2:269446/150‑1 (MQ=255) tCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTg < 2:3139867/150‑1 (MQ=255) tCCACTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTg < 2:1862133/150‑1 (MQ=255) aCTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGtct < 1:4420962/150‑1 (MQ=255) aCTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGtct > 1:4019932/1‑150 (MQ=255) aCTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGtct < 2:492057/150‑1 (MQ=255) aCTTATCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGtct < 2:387940/150‑1 (MQ=255) cTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGtctc < 2:2152943/150‑1 (MQ=255) cTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGtctc > 2:4133974/1‑150 (MQ=255) cTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGtctc > 2:3823508/1‑150 (MQ=255) aTCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGtt < 2:2506128/150‑1 (MQ=255) tCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGTtc > 1:514430/1‑150 (MQ=255) tCCAGCATACTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGTtc > 1:2008966/1‑150 (MQ=255) cATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGTTCTCGcc > 1:3114652/1‑150 (MQ=255) | TGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGTTCTCGCC > CP009273/3457749‑3458042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |