| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,536,360 | C→A | 15.0% | intergenic (+37/‑166) | feoC → / → yhgA | putative DNA‑binding transcriptional regulator/transposase_31 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,536,360 | 0 | C | A | 15.0% | 816.0 / 84.7 | 247 | intergenic (+37/‑166) | feoC/yhgA | putative DNA‑binding transcriptional regulator/transposase_31 family protein |
| Reads supporting (aligned to +/- strand): ref base C (98/112); new base A (17/20); total (115/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
Only 100 of 254 total aligned reads displayed.
GTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAAACA > CP009273/3536211‑3536508 | gTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGc < 1:2663712/150‑1 (MQ=255)gTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGc < 1:2285048/150‑1 (MQ=255)gTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGc < 1:1008025/150‑1 (MQ=255) tGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTc > 2:901281/1‑150 (MQ=255) gggCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCt < 1:423753/150‑1 (MQ=255) gggCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGAATGAGTCt < 2:4090694/150‑1 (MQ=255) ggCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTg < 1:2683544/150‑1 (MQ=255) ggCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTg < 2:2162503/150‑1 (MQ=255) cAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCa > 1:2414141/1‑150 (MQ=255) aaaGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCAt > 2:2256918/1‑150 (MQ=255) aaaGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGAAAAAGCTGCCCGGAAGGAAAAGCCTGTCAGCGCGAGTGGTGGGCGCTGCGAGAACCTTACTCCATCGCCAGGTTTGGAAAGCCCGGGATGCGTCTGCAt > 1:4258880/1‑150 (MQ=255) cGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTGGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCggg < 2:2046326/150‑1 (MQ=255) gTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGc > 1:4183608/1‑150 (MQ=255) gCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCtt < 1:2194449/150‑1 (MQ=255) cGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCttt < 1:4569999/150‑1 (MQ=255) ggATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCtttt < 1:3958613/150‑1 (MQ=255) ggATACAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCCTCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCtttt > 2:4545177/1‑150 (MQ=255) gATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCttttt < 2:1741592/150‑1 (MQ=255) gATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTGGGAAAGCCCGGTATGCGTCTGCATCCGGGCttttt > 2:1041380/1‑150 (MQ=255) aTTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCtttttt < 1:4533034/150‑1 (MQ=255) cAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTtgcg > 1:1736476/1‑150 (MQ=255) aGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTtgcgt > 2:65465/1‑150 (MQ=255) ggAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCCTCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTtgcgtg < 2:1480401/150‑1 (MQ=255) gaaCCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGc < 2:2534444/150‑1 (MQ=255) aaCCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCt < 1:3190093/150‑1 (MQ=255) gACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCa < 1:2936838/150‑1 (MQ=255) aCGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCAt > 1:2743508/1‑150 (MQ=255) aCGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCAt < 1:3375237/150‑1 (MQ=255) cGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATa < 2:324499/150‑1 (MQ=255) ccTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATg < 2:4292754/150‑1 (MQ=255) tctGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAAc < 1:2348334/150‑1 (MQ=255) ctGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAAct > 2:1351318/1‑150 (MQ=255) gCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCtt < 1:3849511/150‑1 (MQ=255) cAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTg > 2:4455968/1‑150 (MQ=255) aGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTgc > 1:4454652/1‑150 (MQ=255) gTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTgca < 2:299421/150‑1 (MQ=255) gTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGCTGGGCGCTGCGTTAACATTACTCCATCGCCTGGTTTGGAAAGCCCGGAATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTGgca > 2:3828293/1‑150 (MQ=255) ttGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTgcag < 1:2002827/150‑1 (MQ=255) gTAACAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTgcagca < 2:3584298/150‑1 (MQ=255) aaaaGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACg > 1:2103084/1‑150 (MQ=255) aaaGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACgg > 2:3204299/1‑150 (MQ=255) aaaGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACgg < 2:2852700/150‑1 (MQ=255) aaGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGc > 1:1267777/1‑150 (MQ=255) aGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCg < 1:2617222/150‑1 (MQ=255) tGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTaa < 1:3126317/150‑1 (MQ=255) tGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTaa < 1:1775958/150‑1 (MQ=255) gCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAg < 2:1814886/150‑1 (MQ=255) cccGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAACAATGCAACTCTTGCAGCACGGCGTAAGt < 2:1713180/150‑1 (MQ=255) ccGGAAGGAAAATCCTGTCTGCGCGAGTGGTGGGCGCTGAGTTAAACTTACTCCATCGCCTGTTTTGTAAAGCCCGGTATGCGTCTGCATACGGGCATTTTTGCGTGCGGCTTTACATAAAAATGCAACTCTTGCAGCACGGCGTAAGtt < 2:1180001/150‑1 (MQ=255) gaaggaaAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCt > 1:1649978/1‑150 (MQ=255) gaaggaaAAGCCTGTCTGCGCGAGTGGAGGGCGCATCGTTAACCTTACTCCATCGCCTCTTTAGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGAGGCATTACATAAAAATGAAACACTTGAAGAACGGCGTAAGTAcca > 1:1650195/1‑149 (MQ=255) aaggaaAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCtt < 2:3657358/150‑1 (MQ=255) aaggaaAAGACTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTATGCATCCGGGCTTTTTTGAGTGCGTCTTTCCATAATATTGCAACTCTTGCAGCACGGCGTAAGTTCCtt < 1:3855569/150‑1 (MQ=255) aggaaAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCttt > 1:4540318/1‑150 (MQ=255) aaaaGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGTTAAGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTTaa > 1:371146/1‑150 (MQ=255) aaGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAg > 1:4351840/1‑150 (MQ=255) aaGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAg < 2:1520796/150‑1 (MQ=255) tGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCAtct > 2:1587448/1‑150 (MQ=255) gTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCAGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTTAAAGCAtctc > 1:152247/1‑150 (MQ=255) tCTGCGCGTGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCg < 1:160757/150‑1 (MQ=255) tCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCATTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCg < 2:4559012/150‑1 (MQ=255) cTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGc > 1:498174/1‑150 (MQ=255) tGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCa > 1:1909441/1‑150 (MQ=255) gAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGAt > 1:1865656/1‑150 (MQ=255) aGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATg < 1:193796/150‑1 (MQ=255) aGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATg < 2:4127577/150‑1 (MQ=255) gtggtgGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGa < 2:1140704/150‑1 (MQ=255) tggtggGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGaa > 1:2735796/1‑150 (MQ=255) tggtggGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGaa > 1:3570951/1‑150 (MQ=255) tggGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAAc > 2:3542442/1‑150 (MQ=255) gggCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACt > 1:810666/1‑150 (MQ=255) ggCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTc < 1:2538213/150‑1 (MQ=255) ggCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTc < 1:733207/150‑1 (MQ=255) gcTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCt > 2:396197/1‑150 (MQ=255) gcTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCt < 2:2367667/150‑1 (MQ=255) cTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTa < 2:1611119/150‑1 (MQ=255) tGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTaa < 2:4343179/150‑1 (MQ=255) gCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAAt < 2:1761790/150‑1 (MQ=255) cGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATa > 2:3290912/1‑150 (MQ=255) gTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATac < 1:2855014/150‑1 (MQ=255) aaCCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATAcaca > 1:1684517/1‑150 (MQ=255) ttACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTATTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGgtg < 1:1167025/150‑1 (MQ=255) cTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTgg > 2:2937949/1‑150 (MQ=255) cATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGt > 2:3352318/1‑150 (MQ=255) cATCGCCTGTTTTGGAAAGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGt > 2:766812/1‑150 (MQ=255) aTCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTg < 1:3700274/150‑1 (MQ=255) cGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGgc < 2:3804446/150‑1 (MQ=255) cTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGAGGcgcg > 2:2672321/1‑150 (MQ=255) tGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGt < 1:3581114/150‑1 (MQ=255) gTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTa < 2:2712708/150‑1 (MQ=255) ggAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTc < 1:3468857/150‑1 (MQ=255) aaaGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATCCACAGGTGTGGAGTGGCGCGTAGAGTcgc > 2:3725622/1‑150 (MQ=255) aaaGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTcgc < 1:3983309/150‑1 (MQ=255) aaGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTcgcg > 2:4366019/1‑150 (MQ=255) aGCCCGGTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCgg < 1:853199/150‑1 (MQ=255) ggTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACCCAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTc < 1:2256283/150‑1 (MQ=255) gTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCa < 1:932831/150‑1 (MQ=255) gTATGAGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCGCGCAGGGATGAAACCTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTcc > 2:1370395/1‑149 (MQ=255) gCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACCGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAaaca < 2:3182542/150‑1 (MQ=255) gCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAaaca < 2:3182509/150‑1 (MQ=255) | GTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAAACA > CP009273/3536211‑3536508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |