| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,544,369 | T→A | 18.6% | E488D (GAA→GAT) | malP ← | maltodextrin phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,544,369 | 0 | T | A | 18.6% | 849.9 / 181.7 | 332 | E488D (GAA→GAT) | malP | maltodextrin phosphorylase |
| Reads supporting (aligned to +/- strand): ref base T (123/147); new base A (28/34); total (151/181) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 340 total aligned reads displayed.
ATGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGCT > CP009273/3544222‑3544517 | aTGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTc < 1:4507646/150‑1 (MQ=255) tGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTcc < 1:329694/150‑1 (MQ=255) tGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATcc > 2:3632737/1‑150 (MQ=255) gCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCa < 1:887252/150‑1 (MQ=255) cAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCTCAAACTCCGCCAGACGGAATTTATTCGCCTGCTTGATCTCGCGATATTGCGGACGGAATTTCGCATCATCAGCGAATTTTTCCAg < 1:1002333/150‑1 (MQ=255) cAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAg < 1:1352967/150‑1 (MQ=255) cGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTg < 1:1186537/150‑1 (MQ=255) tttGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGAt < 1:560602/150‑1 (MQ=255) tttGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGAt > 1:1971465/1‑150 (MQ=255) ttGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATc > 2:4246991/1‑150 (MQ=255) gAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGAt < 2:429071/150‑1 (MQ=255) atatCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCg > 2:2669635/1‑150 (MQ=255) atCGAATATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCTGCTGATCgag < 1:4636469/150‑1 (MQ=255) cGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGAt < 2:3230454/150‑1 (MQ=255) aaaaTCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCg > 2:1480484/1‑150 (MQ=255) aTCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTa < 2:3404342/150‑1 (MQ=255) aTCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTa > 2:152028/1‑150 (MQ=255) cGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGc > 2:1670130/1‑150 (MQ=255) gCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGcc > 2:3593719/1‑150 (MQ=255) tgtgGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCAc > 1:1327312/1‑150 (MQ=255) gtgGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCAct < 1:4098136/150‑1 (MQ=255) gATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCtt < 2:4564172/150‑1 (MQ=255) gATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTg > 2:860794/1‑150 (MQ=255) gATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTg > 1:1386983/1‑150 (MQ=255) aTCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGc > 1:812369/1‑150 (MQ=255) tctatcccGTTACGAACTTTCACATACTCAGCCAGTCGGACTTTATTCGCCTGCTTGATCTCTCGATTTTGCTGACGGATTTTCGCATCTTCAGCGAATTTTTCCTGTTTGATCAGCTGATCGAGATGGTTAGCCCACTCTTTTTGCAGt < 1:3372704/144‑1 (MQ=255) tcAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGCTCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGt < 1:1497591/150‑1 (MQ=255) tcAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGt < 1:648783/150‑1 (MQ=255) cAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTg < 2:2917177/150‑1 (MQ=255) ccGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTa < 1:3083950/150‑1 (MQ=255) ccGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTa < 2:2323703/150‑1 (MQ=255) cGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTAt < 2:472591/150‑1 (MQ=255) cGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTAt > 1:2565782/1‑150 (MQ=255) cGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTAt < 2:4035148/150‑1 (MQ=255) ggTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATc > 2:726290/1‑150 (MQ=255) gTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATcc < 1:3959930/150‑1 (MQ=255) gTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATcc < 1:3145839/150‑1 (MQ=255) gTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATcc < 2:2282793/150‑1 (MQ=255) aCGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCaa < 1:2893944/150‑1 (MQ=255) gAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACa < 1:482752/150‑1 (MQ=255) aCTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACaga < 1:2073012/150‑1 (MQ=255) ttCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAgcc < 1:2132606/150‑1 (MQ=255) tCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAgccg < 2:4455704/150‑1 (MQ=255) acaAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAgccgcc > 1:3531007/1‑150 (MQ=255) caAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCa < 2:2489209/150‑1 (MQ=255) aaaCTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAg > 2:1962697/1‑150 (MQ=255) cTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGc > 2:3334039/1‑150 (MQ=255) ccGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCg < 2:4523593/150‑1 (MQ=255) ccGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCg > 1:1576865/1‑150 (MQ=255) cGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCgg > 1:961877/1‑150 (MQ=255) gCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCggg < 1:698135/150‑1 (MQ=255) cAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGtt < 1:1037894/150‑1 (MQ=255) cTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGtt < 1:4167746/150‑1 (MQ=255) cTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGtt > 2:1333582/1‑150 (MQ=255) ttATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTg < 1:2876133/150‑1 (MQ=255) aTTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGAt < 1:1905507/150‑1 (MQ=255) cGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCa < 1:987650/150‑1 (MQ=255) gCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAg < 1:2315096/150‑1 (MQ=255) cTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCg < 2:933281/150‑1 (MQ=255) cTGCTTGATCTCGCGATAGTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCg < 2:35934/150‑1 (MQ=255) tGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGa > 1:2036509/1‑150 (MQ=255) cTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACg < 2:4431506/150‑1 (MQ=255) gATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTgg < 2:2070189/150‑1 (MQ=255) aTCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTggg > 2:2854600/1‑150 (MQ=255) aTCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTggg > 2:3446819/1‑150 (MQ=255) tctcGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTgggg < 2:4060530/150‑1 (MQ=255) ctcGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGt < 2:2783258/150‑1 (MQ=255) ctcGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGt < 1:4247620/150‑1 (MQ=255) gcgATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAAt > 1:3336337/1‑150 (MQ=255) gATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATAc > 2:1599889/1‑150 (MQ=255) gATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATAc > 1:3537447/1‑150 (MQ=255) gATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATAc < 1:3887358/150‑1 (MQ=255) atatTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATAcc > 2:661123/1‑150 (MQ=255) tGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTg > 2:1894638/1‑150 (MQ=255) ggAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGt > 2:1986136/1‑150 (MQ=255) aaTTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTa > 2:4174758/1‑150 (MQ=255) tttCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATg > 1:4510893/1‑150 (MQ=255) tttCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATg < 1:2336533/150‑1 (MQ=255) ttCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATgg < 1:2725225/150‑1 (MQ=255) ttCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATgg > 2:3553066/1‑150 (MQ=255) ttCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATgg > 2:2764126/1‑150 (MQ=255) tCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGa > 1:4061005/1‑150 (MQ=255) gCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGCGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAt < 2:3731783/150‑1 (MQ=255) catcatCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAtt < 1:4242236/150‑1 (MQ=255) catcatCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAtt > 1:2630880/1‑150 (MQ=255) catcatCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAtt < 1:2405793/150‑1 (MQ=255) catcatCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAtt > 2:593039/1‑150 (MQ=255) atcatcAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGAAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTTTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAttt > 2:1155677/1‑150 (MQ=255) atcatcAGCGAAATTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCATTTTGCAGTTATTTATCCAACAGAGCCGCCAGAGCCGGGTGGCACTGTTTGATCAAGCGACGTGGTGTAATACCGTTGGTGACTTTATGGAAttt > 2:1155768/1‑150 (MQ=255) tcatcaGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTg < 2:3854938/150‑1 (MQ=255) tcatcaGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTg < 2:3612436/150‑1 (MQ=255) atcaGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGtt < 2:2626582/150‑1 (MQ=255) tcaGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTc < 2:1754183/150‑1 (MQ=255) aGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCgg > 1:1768166/1‑150 (MQ=255) gCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGc < 2:1632416/150‑1 (MQ=255) gAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCa > 2:4205990/1‑150 (MQ=255) aTTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATa > 2:3013322/1‑150 (MQ=255) tttttCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAg > 1:4325119/1‑150 (MQ=255) ttttCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGc < 1:3724802/150‑1 (MQ=255) ttttCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGc < 1:1847379/150‑1 (MQ=255) | ATGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGCT > CP009273/3544222‑3544517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |