| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,580,302 | G→T | 11.1% | intergenic (‑119/‑1) | ggt ← / → yhhA | gamma‑glutamyltranspeptidase/DUF2756 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,580,302 | 0 | G | T | 11.1% | 977.4 / 61.8 | 270 | intergenic (‑119/‑1) | ggt/yhhA | gamma‑glutamyltranspeptidase/DUF2756 family protein |
| Reads supporting (aligned to +/- strand): ref base G (137/103); new base T (15/15); total (152/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 279 total aligned reads displayed.
CCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCA > CP009273/3580153‑3580451 | cACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGa < 1:2588440/150‑1 (MQ=255) aCCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGAt < 1:2831592/150‑1 (MQ=255) aCCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGAt < 1:449926/150‑1 (MQ=255) cGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGaa < 1:2159426/150‑1 (MQ=255) ggCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGaaa > 1:3935506/1‑150 (MQ=255) ggCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGaaa < 2:3349183/150‑1 (MQ=255) gCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAAc < 2:467960/150‑1 (MQ=255) cGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAATGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACg > 1:2789483/1‑150 (MQ=255) gTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGa > 2:2847538/1‑150 (MQ=255) tAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGAc > 2:1744662/1‑150 (MQ=255) tAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGAc < 1:2463098/150‑1 (MQ=255) aaaaaCGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACt > 2:974253/1‑150 (MQ=255) aaaaaCGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACt > 1:973669/1‑150 (MQ=255) aaaaCGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACtt > 1:3310379/1‑150 (MQ=255) cGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACTTCTGa < 2:2597895/150‑1 (MQ=255) gTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGAt > 1:59213/1‑150 (MQ=255) ggTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCt > 1:3196313/1‑150 (MQ=255) tATCATCGTTATTCTCCAGTGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACgg < 2:4599686/150‑1 (MQ=255) tcatcGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCa < 2:3829120/150‑1 (MQ=255) gTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCt > 2:1047627/1‑150 (MQ=255) gTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCt > 1:3462071/1‑150 (MQ=255) ttATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTg > 2:3413354/1‑150 (MQ=255) tATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGc > 1:2115383/1‑150 (MQ=255) tATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGc < 1:1838238/150‑1 (MQ=255) aTTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGcc > 2:653669/1‑150 (MQ=255) ttCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGTTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCg < 2:1957712/150‑1 (MQ=255) ttCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCg < 1:465891/150‑1 (MQ=255) ttCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCg > 2:2723785/1‑150 (MQ=255) ctcCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGtt < 2:4479646/150‑1 (MQ=255) ccAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTg > 2:695142/1‑150 (MQ=255) cAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGt > 1:1742118/1‑150 (MQ=255) cAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGt < 1:980815/150‑1 (MQ=255) agagATTAAGGGGCAACCCCAGCTAAGCCTGGTATATATCTCTGAATTAATCCTCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTc < 1:880292/150‑1 (MQ=255) gagaTTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCg < 2:1804052/150‑1 (MQ=255) gagaTTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCg < 2:2226403/150‑1 (MQ=255) agaTTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCgg > 2:3073198/1‑150 (MQ=255) gtttAAGGGGCATCCCCAGCTAAGCATGTTATATAACTCTGAATTAATCATCGTTTTGTAGGGAAGGGAGTAAACTTATAGGTTATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGc < 1:3617588/148‑1 (MQ=255) ttAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATATTCAGAGGAGGATACGCGATGAAACTACTTCTGATACTTACGGCACTCCTGCCGTTTGTCGGCtt > 1:3092995/1‑150 (MQ=255) aaCCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGcc < 1:2094581/150‑1 (MQ=255) aaCCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGcc < 1:1679032/150‑1 (MQ=255) aaCCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGcc < 2:4085232/150‑1 (MQ=255) aCCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGccc < 1:3461681/150‑1 (MQ=255) aCCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGccc < 1:2845142/150‑1 (MQ=255) ccccAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCa > 1:4382322/1‑150 (MQ=255) cccAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCAt > 1:3200184/1‑150 (MQ=255) cccAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCAt < 2:2255198/150‑1 (MQ=255) cAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTa < 2:3212835/150‑1 (MQ=255) cAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTa > 2:484251/1‑150 (MQ=255) gCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAAt > 2:3143637/1‑150 (MQ=255) cTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATa > 2:2035665/1‑150 (MQ=255) tAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATAc > 2:4052352/1‑150 (MQ=255) aaGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATAct > 2:3722547/1‑150 (MQ=255) aGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATActc < 2:1476226/150‑1 (MQ=255) ccTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTg < 1:479812/150‑1 (MQ=255) ggTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGaac < 2:1307993/150‑1 (MQ=255) gTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGaaca < 1:2211309/150‑1 (MQ=255) tataACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAAcc < 2:3539077/150‑1 (MQ=255) ataACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAAccc > 1:1069148/1‑150 (MQ=255) ataACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAAccc > 2:1943598/1‑150 (MQ=255) ataACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAAccc < 1:1310781/150‑1 (MQ=255) aCTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTaa < 2:2628459/150‑1 (MQ=255) ctctGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAAc < 2:1212937/150‑1 (MQ=255) aaTTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGcc > 1:3562994/1‑150 (MQ=255) aaTTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGcc > 1:1241048/1‑150 (MQ=255) ttAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCgg < 1:1393053/150‑1 (MQ=255) atcatcGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGt > 2:3728740/1‑150 (MQ=255) catcGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTAt > 2:1440143/1‑150 (MQ=255) atcGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATc > 2:2009948/1‑150 (MQ=255) cGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAg > 1:1951737/1‑150 (MQ=255) gTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGa > 1:4477459/1‑150 (MQ=255) ttgtGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTGGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGGATCCGAt > 2:3528081/4‑150 (MQ=255) tttGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATa < 2:2454169/150‑1 (MQ=255) tGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATAcc < 1:783475/150‑1 (MQ=255) tGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATAcc > 2:2400934/1‑150 (MQ=255) gTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATAccc < 2:652250/150‑1 (MQ=255) gTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATAccc > 2:2939468/1‑150 (MQ=255) cGGGAAGCGAGTAAACTTAAAGGATATCGTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACccag < 2:1150720/150‑1 (MQ=255) gggAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACccagc > 2:136366/1‑150 (MQ=255) gAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACccagcca < 1:4222373/150‑1 (MQ=255) gAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACccagcca > 2:2738594/1‑150 (MQ=255) gTAAACTTAAAGGATATCTTCAGAGGAGGATACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCgg > 1:640248/1‑150 (MQ=255) gTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCgg > 2:1688244/1‑150 (MQ=255) aaaCTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGAt > 2:100595/1‑150 (MQ=255) aaCTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATg < 1:1496786/150‑1 (MQ=255) aCTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGc < 2:4496440/150‑1 (MQ=255) cTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCa > 1:1164134/1‑150 (MQ=255) cTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCa > 1:688897/1‑150 (MQ=255) aaGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAAcc > 2:4327453/1‑150 (MQ=255) ggATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCa < 1:2995296/150‑1 (MQ=255) tCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGc < 1:3134729/150‑1 (MQ=255) tCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGc > 1:840661/1‑150 (MQ=255) cTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCa > 1:1068950/1‑150 (MQ=255) ttCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAg < 1:4172147/150‑1 (MQ=255) cAGAGGAGGATACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGAc > 2:4083285/1‑150 (MQ=255) cAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGAc > 2:758980/1‑150 (MQ=255) aggaggATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCa > 2:1059773/1‑150 (MQ=255) aggaTACGCTATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCa > 1:933814/1‑150 (MQ=255) cgcgATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCa < 1:484251/150‑1 (MQ=255) cgATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGc < 1:3363957/150‑1 (MQ=255) gATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCa < 1:2274224/150‑1 (MQ=255) | CCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCA > CP009273/3580153‑3580451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |