| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,590,930 | T→A | 60.0% | intergenic (‑10/‑414) | livK ← / → panM | leucine transporter subunit/PanD autocleavage accelerator, panothenate synthesis |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,590,930 | 0 | T | A | 60.0% | 213.3 / inf | 271 | intergenic (‑10/‑414) | livK/panM | leucine transporter subunit/PanD autocleavage accelerator, panothenate synthesis |
| Reads supporting (aligned to +/- strand): ref base T (46/62); new base A (71/91); total (118/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
Only 100 of 273 total aligned reads displayed.
TTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTATTTTTCAGTCG > CP009273/3590781‑3591078 | aaTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATccc < 1:565292/150‑1 (MQ=255) aTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAAcccc < 2:2386644/150‑1 (MQ=255) aTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAAcccc < 2:141314/150‑1 (MQ=255) ttCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCa < 2:249172/150‑1 (MQ=255) tCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCAt > 2:2996002/1‑150 (MQ=255) cATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCTTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCTTTTCATAGTCAAAAAACCCCATTc < 2:1961283/150‑1 (MQ=255) cATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTc < 2:2911548/150‑1 (MQ=255) cATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTc < 2:38344/150‑1 (MQ=255) atatCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCg < 1:3496525/150‑1 (MQ=255) atatCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCg > 2:1489101/1‑150 (MQ=255) tatCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGt < 1:4386516/150‑1 (MQ=255) cccACTGGGCAATCGGGCCGGACCTCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgtt < 2:3057772/150‑1 (MQ=255) ccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttg < 2:1798093/150‑1 (MQ=255) ccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgttg < 2:568408/150‑1 (MQ=255) ccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgttg > 1:3891237/1‑150 (MQ=255) ccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgttg < 2:2642367/150‑1 (MQ=255) cACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgt < 2:1885250/150‑1 (MQ=255) aCTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgttgtg > 2:1860319/1‑150 (MQ=255) aCTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgttgtg > 2:2238002/1‑150 (MQ=255) aCTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgttgtg > 2:2835169/1‑150 (MQ=255) cTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgt > 1:2859025/1‑150 (MQ=255) cTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgt < 2:2939561/150‑1 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGAtgttgtgtt > 2:3240246/1‑150 (MQ=255) aaTCGGGCCGGACATCGCGCCGACAACGGCGACTTTCATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCttt < 1:3705834/150‑1 (MQ=255) aaTCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCttt < 1:664696/150‑1 (MQ=255) ggCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAGGTTGTGTTGCTTTGtttt > 2:171236/1‑150 (MQ=255) ggCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGtttt > 1:458551/1‑150 (MQ=255) gACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAtgt > 2:2985985/1‑150 (MQ=255) aCATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAtgtg < 1:4399927/150‑1 (MQ=255) cATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATgtgt > 2:3784680/1‑150 (MQ=255) cgcgCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTaa < 2:2776669/150‑1 (MQ=255) gcgcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAAc < 2:898734/150‑1 (MQ=255) cgcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACa < 2:653864/150‑1 (MQ=255) gcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACaa < 2:770432/150‑1 (MQ=255) ccGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACaaa > 1:2228090/1‑150 (MQ=255) ccGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACaaa > 1:607930/1‑150 (MQ=255) cGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAAt < 1:1915816/150‑1 (MQ=255) cGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAAt < 1:4129020/150‑1 (MQ=255) cGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAAt < 2:2979786/150‑1 (MQ=255) cGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGGGTTGCTTTGTTTTTATGTGTTAACAAAt > 2:3407147/1‑150 (MQ=255) cGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAAt > 2:1938989/1‑150 (MQ=255) gACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATc < 1:1126994/150‑1 (MQ=255) aCAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCa < 1:378919/150‑1 (MQ=255) cAACGGCGAATTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATTGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAg < 2:2031195/150‑1 (MQ=255) cGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACt < 1:2703021/150‑1 (MQ=255) cGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTACCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACt < 2:3666024/150‑1 (MQ=255) ggCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTg < 1:836341/150‑1 (MQ=255) gACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGGTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTc > 1:4600145/1‑150 (MQ=255) tAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttt < 1:100336/150‑1 (MQ=255) atatCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGACAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttttt > 1:3352495/1‑150 (MQ=255) tCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTtata > 2:3140309/1‑150 (MQ=255) cGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCAGTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATAc > 2:40626/1‑150 (MQ=255) gTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACt < 2:2523019/150‑1 (MQ=255) gTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACt < 2:3192674/150‑1 (MQ=255) gTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACt < 2:2680067/150‑1 (MQ=255) tCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTg > 2:4498461/1‑150 (MQ=255) tCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTg < 2:4409673/150‑1 (MQ=255) aGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCa > 2:1136813/1‑150 (MQ=255) cATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTg < 1:2322132/150‑1 (MQ=255) cATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTg < 1:1584215/150‑1 (MQ=255) aTAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGt < 1:2623129/150‑1 (MQ=255) aGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt > 2:1749802/1‑150 (MQ=255) gCGGTTTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGtttt < 2:3287908/150‑1 (MQ=255) gCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTATGTTTTTATGTGTTAACAAAAAAGACTGTTCTTTTTTTATACTGCACTGtttt > 1:4081516/1‑150 (MQ=255) ggTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTg < 2:2454276/150‑1 (MQ=255) gtgtgAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCt < 2:353053/150‑1 (MQ=255) aaaTTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTg < 1:1610079/150‑1 (MQ=255) aaTTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGa < 1:4553340/150‑1 (MQ=255) tGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTa < 2:274483/150‑1 (MQ=255) ccAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAg < 2:3013125/150‑1 (MQ=255) aGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAggg < 1:1576351/150‑1 (MQ=255) cAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTa < 1:3628329/150‑1 (MQ=255) cAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTa < 1:242258/150‑1 (MQ=255) catcCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCGGTCTGATTAAGGGGTTAgcgc > 1:2574259/1‑150 (MQ=255) cGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTAtttt > 1:1799138/1‑150 (MQ=255) cGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTAtttt > 2:940062/1‑150 (MQ=255) gatgatAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtg > 1:2944003/1‑150 (MQ=255) tgatAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtgtg > 1:254705/1‑150 (MQ=255) tgatAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtgtg < 1:3301350/150‑1 (MQ=255) tAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGata < 1:1940821/150‑1 (MQ=255) tAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGata < 1:3194005/150‑1 (MQ=255) tAGTTTTCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGata < 1:3193580/150‑1 (MQ=255) ttttCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGataata > 2:4276980/1‑150 (MQ=255) tttCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAg < 1:217166/150‑1 (MQ=255) tCGCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCg > 2:4211282/1‑150 (MQ=255) cGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGa > 2:2595541/1‑150 (MQ=255) gCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGAt > 1:2117951/1‑150 (MQ=255) gCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGAt > 1:4451106/1‑150 (MQ=255) gCATTCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGAt > 2:1627460/1‑150 (MQ=255) tCCGTTTCATAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTaaa < 2:2276332/150‑1 (MQ=255) tCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCt > 1:2216823/1‑150 (MQ=255) tAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTAtt > 1:2403788/1‑150 (MQ=255) tAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTAtt < 1:4163801/150‑1 (MQ=255) tAGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTAtt > 1:4295973/1‑150 (MQ=255) aGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTAttt < 1:4408924/150‑1 (MQ=255) aGTCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTAttt > 1:909341/1‑150 (MQ=255) tCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTAttttt < 1:3315856/150‑1 (MQ=255) tCAAAAAACCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTAttttt < 2:1311060/150‑1 (MQ=255) aaTCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTATTTTTCAGTc < 2:1095574/150‑1 (MQ=255) aTCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTATTTTTCAGTCg > 1:1262546/1‑150 (MQ=255) | TTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTATTTTTCAGTCG > CP009273/3590781‑3591078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |