Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,661,179 | T→A | 27.7% | Y457F (TAC→TTC) | yhjA ← | putative cytochrome C peroxidase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,661,179 | 0 | T | A | 27.7% | 404.3 / 187.8 | 220 | Y457F (TAC→TTC) | yhjA | putative cytochrome C peroxidase |
Reads supporting (aligned to +/- strand): ref base T (98/61); new base A (43/18); total (141/79) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.72e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 227 total aligned reads displayed.
AATCCTAAGCAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCA > CP009273/3661032‑3661328 | cTAAGCAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACAccc > 1:3938842/1‑150 (MQ=255) cTAAGCAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACAccc > 2:1908821/1‑150 (MQ=255) cTAAGCAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACAccc < 1:713770/150‑1 (MQ=255) tAAGCAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACAcccc < 2:1343495/150‑1 (MQ=255) tAAGCAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACAcccc > 1:1468844/1‑150 (MQ=255) cAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTc < 2:3904618/150‑1 (MQ=255) cAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTc > 1:2390928/1‑150 (MQ=255) aGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCa > 1:2485101/1‑150 (MQ=255) gAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAg < 1:1140413/150‑1 (MQ=255) gAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAg > 1:1279872/1‑150 (MQ=255) gAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGATGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAg > 1:2614320/1‑150 (MQ=255) aaaaaCGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGa > 1:3638275/1‑150 (MQ=255) aaaCGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACt > 2:1789690/1‑150 (MQ=255) aaCGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATAGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACtg > 2:1791770/1‑150 (MQ=255) aCGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACtgt > 2:2111498/1‑150 (MQ=255) aCGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACtgt > 2:4530998/1‑150 (MQ=255) aCGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACtgt > 1:4174328/1‑150 (MQ=255) gACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGGTCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGc > 2:2093919/1‑150 (MQ=255) gACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGc > 1:1974540/1‑150 (MQ=255) aCTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCa > 1:2472818/1‑150 (MQ=255) cTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAg < 2:3269458/150‑1 (MQ=255) ttttATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGa < 2:1572255/150‑1 (MQ=255) ttATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGaaa > 2:2074992/1‑150 (MQ=255) taatataaACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCt < 2:4400595/150‑1 (MQ=255) aaaCATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGata < 1:3998902/150‑1 (MQ=255) aTTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATatcat > 2:1081070/1‑150 (MQ=255) ttAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATcc < 1:805413/150‑1 (MQ=255) tAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCca > 1:689271/1‑150 (MQ=255) tAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCca > 2:3037617/1‑150 (MQ=255) aaCATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCcac > 1:945201/1‑150 (MQ=255) aaCATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCcac > 1:3093569/1‑150 (MQ=255) cATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACAt < 1:929202/150‑1 (MQ=255) aTGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACAtc > 2:814451/1‑150 (MQ=255) aTGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACAtc > 1:1764907/1‑150 (MQ=255) taataTTAAAAACAGACTTTATTATCGTAATAAAACTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACAtcctcc < 2:1387744/150‑1 (MQ=255) taataTTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACAtcctcc > 1:1862059/1‑150 (MQ=255) aataTTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATcctcct < 1:1440834/150‑1 (MQ=255) aataTTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATcctcct > 2:2802289/1‑150 (MQ=255) atTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCg > 1:266715/1‑150 (MQ=255) aaaaaCAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCa > 1:840351/1‑150 (MQ=255) aCAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGctc > 2:4476627/1‑150 (MQ=255) cAGACTTTATTATAGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGctct < 1:4207407/150‑1 (MQ=255) gACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCttt < 2:2158322/150‑1 (MQ=255) tttATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGcc < 1:4496213/150‑1 (MQ=255) tttATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGcc < 1:2163638/150‑1 (MQ=255) ttattaTCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCt > 1:594779/1‑150 (MQ=255) tattatCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCANCCACATCCTCCTGCGGCAGCTCTTTGCCTa < 1:4282548/150‑1 (MQ=255) ttatCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTAcc > 1:29997/1‑150 (MQ=255) ttatCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTAcc > 2:4330053/1‑150 (MQ=255) tatCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTATGATATCATCCACATCCTCCTGCTGCAGCTCTTTGCCTACCt < 2:3541248/150‑1 (MQ=255) tatCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCt < 1:890354/150‑1 (MQ=255) tatCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCt > 1:1202076/1‑150 (MQ=255) cGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGAt < 1:733816/150‑1 (MQ=255) cGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGAt > 2:2363760/1‑150 (MQ=255) aataaAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAgc > 1:3412731/1‑150 (MQ=255) aaaaaTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCgca > 1:3497168/1‑150 (MQ=255) aaaaaTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCgca > 2:3142322/1‑150 (MQ=255) aaaaTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCgcag > 2:1865349/1‑150 (MQ=255) aaaaTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCgcag > 1:1151820/1‑150 (MQ=255) aaaTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCgcagc > 2:1294755/1‑150 (MQ=255) aaTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCgcagca < 1:2801059/150‑1 (MQ=255) aaTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCgcagca > 2:3697655/1‑150 (MQ=255) aTCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCAt > 1:1049857/1‑150 (MQ=255) gCCCAAACATTGCTGTTCGGGCTATCAAATAAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTCCGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAg > 1:4540551/1‑150 (MQ=255) cAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGttt > 2:3943633/1‑150 (MQ=255) aaaCATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTc < 2:1468961/150‑1 (MQ=255) aaCATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCa > 2:4644355/1‑150 (MQ=255) cATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCAcc > 2:1910720/1‑150 (MQ=255) tGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCg < 2:41681/150‑1 (MQ=255) cGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGt > 2:1012450/1‑150 (MQ=255) cGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGt < 2:4310918/150‑1 (MQ=255) gATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTc > 2:4217996/1‑150 (MQ=255) tCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCgg > 1:1959608/1‑150 (MQ=255) aaaTTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCa > 2:3602983/1‑150 (MQ=255) aaaTTAATTATTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCa > 2:3497156/1‑150 (MQ=255) ttaattaTTGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATAAGTTTCACCGCCCCGTCCAGCGTCGGCACGt > 2:3442006/1‑150 (MQ=255) taattaTTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTc > 2:2578468/1‑150 (MQ=255) taattaTTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTc < 2:1279872/150‑1 (MQ=255) attattGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCAc > 1:488763/1‑150 (MQ=255) ttattGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCAcc < 1:1595213/150‑1 (MQ=255) tattGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACcg < 2:620814/150‑1 (MQ=255) gattGTTTATCCAGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCAACCACATCCTCCTGCGGCGGCACTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCCCGTCACcg > 2:1988389/2‑150 (MQ=255) ttGTTTATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACcgcg > 2:4304017/1‑150 (MQ=255) gTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGAt < 1:415543/150‑1 (MQ=255) gTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGAt > 2:2901830/1‑150 (MQ=255) gTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGAt < 1:2842435/150‑1 (MQ=255) ttATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATgg < 1:4343612/150‑1 (MQ=255) ttATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATgg < 1:618081/150‑1 (MQ=255) tATCCTGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGa > 2:72987/1‑150 (MQ=255) aTCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGaa < 1:4514690/150‑1 (MQ=255) ccTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGt > 1:1888973/1‑150 (MQ=255) cTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAgaa > 1:3063026/1‑148 (MQ=255) tGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTAc > 1:2594990/1‑150 (MQ=255) tGCATATACGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTAc < 1:4292535/150‑1 (MQ=255) tataCGGCGTGAACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTg > 2:2091256/1‑150 (MQ=255) ggCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGtt < 2:3325110/150‑1 (MQ=255) gtgaACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTaaa < 1:3481848/150‑1 (MQ=255) tgtACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAg < 1:2111498/150‑1 (MQ=255) gtACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGc < 2:2195713/150‑1 (MQ=255) tACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCa < 2:2472818/150‑1 (MQ=255) | AATCCTAAGCAGAAAAACGACTTTTTATAATATAAACATTTAACATGATAATATTAAAAACAGACTTTATTATCGTAATAAAAATCGCCCAAACATTGCTGTTCGGGCGATCAAATTAATTATTGTTTATCCTGCATATACGGCGTGTACACCCCGTTCAGACTGTGCAGGAAAGCTACGATATCATCCACATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCA > CP009273/3661032‑3661328 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |