| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,672,064 | T→A | 34.9% | T162S (ACC→TCC) | yhjH ← | cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,672,064 | 0 | T | A | 34.9% | 329.6 / inf | 284 | T162S (ACC→TCC) | yhjH | cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Reads supporting (aligned to +/- strand): ref base T (92/93); new base A (54/45); total (146/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.71e-01 | |||||||||||
Only 100 of 285 total aligned reads displayed.
CCCGCGACAATAGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAGGG > CP009273/3671915‑3672210 | cccGCGACAATAGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGt < 2:4148522/150‑1 (MQ=255) gcgACAATAGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTAcc > 2:1149083/1‑150 (MQ=255) cgACAATAGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCa > 1:2864384/1‑150 (MQ=255) gACAATAGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCaa > 1:4272524/1‑150 (MQ=255) aaTAGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAat > 1:3717743/1‑150 (MQ=255) gATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCa > 1:2045039/1‑150 (MQ=255) gATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCa < 1:1371620/150‑1 (MQ=255) cATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCca < 1:976979/150‑1 (MQ=255) cATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCca < 1:995778/150‑1 (MQ=255) cATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCca > 2:512445/1‑150 (MQ=255) ttAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCcaca < 1:2127485/150‑1 (MQ=255) aGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGc < 1:3517267/150‑1 (MQ=255) gTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGc > 1:3608809/1‑150 (MQ=255) tAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGcc < 2:1544988/150‑1 (MQ=255) aaaGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCaa < 2:2263490/150‑1 (MQ=255) aGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAAt < 1:638612/150‑1 (MQ=255) aGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAAt > 1:2751411/1‑150 (MQ=255) aGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAAt > 2:1804184/1‑150 (MQ=255) gCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAAtt < 1:3029640/150‑1 (MQ=255) agaAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTcaca > 1:1101268/1‑150 (MQ=255) gaAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTCCCAAAATCATCCAGCCACAGCGGGCCAAATTcacac > 2:2149182/1‑150 (MQ=255) aaaaGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTcacaca > 1:2530546/1‑150 (MQ=255) aaaGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACAt > 1:1732229/1‑150 (MQ=255) agTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAg > 1:3604532/1‑150 (MQ=255) agTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAg > 1:2727145/1‑150 (MQ=255) gtgtGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAgg > 1:3693320/1‑150 (MQ=255) gtgtGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAgg > 1:3211277/1‑150 (MQ=255) gtgtGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAgg < 2:3906082/150‑1 (MQ=255) tgtgCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGc < 2:1204081/150‑1 (MQ=255) cGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAg > 1:1213549/1‑150 (MQ=255) gTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAgg > 2:4480693/1‑150 (MQ=255) tCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGt > 2:1987425/1‑150 (MQ=255) tCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGaa > 2:3343998/1‑150 (MQ=255) tCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGaa < 1:79752/150‑1 (MQ=255) tCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGaa > 2:695718/1‑150 (MQ=255) tCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGaa < 2:2475928/150‑1 (MQ=255) ggCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCt > 2:3425960/1‑150 (MQ=255) gCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCtt < 1:891348/150‑1 (MQ=255) gCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCtt < 2:1903687/150‑1 (MQ=255) gACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTc < 2:2975168/150‑1 (MQ=255) aCTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCg < 1:2064735/150‑1 (MQ=255) cTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCgg > 1:1276588/1‑150 (MQ=255) tGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGc > 2:675395/1‑150 (MQ=255) tGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGc < 2:365445/150‑1 (MQ=255) tGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGc > 1:3249870/1‑150 (MQ=255) aCGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAg < 1:806448/150‑1 (MQ=255) aCGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAg < 2:2345430/150‑1 (MQ=255) gcagcaTCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGAc < 1:3776272/150‑1 (MQ=255) gcagcaTCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGAc < 1:3069420/150‑1 (MQ=255) agcaTCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACgg > 1:1687341/1‑150 (MQ=255) aaCAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTcc < 1:1511416/150‑1 (MQ=255) cAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTccac < 1:1886866/150‑1 (MQ=255) cAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTccac < 2:1441778/150‑1 (MQ=255) ctcGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGtt > 1:3643690/1‑150 (MQ=255) tcGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTc < 1:3659779/150‑1 (MQ=255) cgcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCg > 2:2817743/1‑150 (MQ=255) cgcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCg > 2:3315747/1‑150 (MQ=255) cgcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGAGATGCTCCACCAGTTCg > 1:3301858/1‑150 (MQ=255) gcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGa < 2:3248201/150‑1 (MQ=255) cgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGaa > 2:4011753/1‑150 (MQ=255) cgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAAc < 1:573480/150‑1 (MQ=255) cgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAAc > 1:1482700/1‑150 (MQ=255) gATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACg < 1:4614001/150‑1 (MQ=255) ttttGATGTAGTCATAACGCTCTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCa < 1:743868/150‑1 (MQ=255) ttGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGc > 2:641209/1‑150 (MQ=255) tGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGcc > 1:1172024/1‑150 (MQ=255) aGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGaa < 1:2204389/150‑1 (MQ=255) gTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAg > 2:1009772/1‑150 (MQ=255) cATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGAc > 1:4222418/1‑150 (MQ=255) aTAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACg > 2:4273263/1‑150 (MQ=255) aaCGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCt < 2:378260/150‑1 (MQ=255) cacttcacttAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAAt < 2:3717997/150‑1 (MQ=255) cttcacttAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCt < 2:2499795/150‑1 (MQ=255) cttcacttAGCGCAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCt < 2:4246721/150‑1 (MQ=255) cacttAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGgc < 1:2928177/150‑1 (MQ=255) cttAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGgcgc > 2:3139764/1‑150 (MQ=255) tAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAg > 2:36326/1‑150 (MQ=255) tAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAg < 2:2461522/150‑1 (MQ=255) tAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAg > 2:2072925/1‑150 (MQ=255) aGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAgg < 2:1228889/150‑1 (MQ=255) gcgcAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGa > 2:322034/1‑150 (MQ=255) gcgcAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGa < 2:2727145/150‑1 (MQ=255) gcAGAGAAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGAtt > 2:165426/1‑150 (MQ=255) cAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGAttt < 1:1037967/150‑1 (MQ=255) cAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGAttt > 1:3952872/1‑150 (MQ=255) agagAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGAtttt > 1:2218359/1‑150 (MQ=255) agagAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGAtttt < 2:2737019/150‑1 (MQ=255) agaAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTg < 2:1308443/150‑1 (MQ=255) agaAATTTGCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTg > 1:4334410/1‑150 (MQ=255) gaAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTgg < 1:1476430/150‑1 (MQ=255) gCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGa > 1:2623032/1‑150 (MQ=255) gCCATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGa > 2:2873848/1‑150 (MQ=255) ccATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGAc > 1:675610/1‑150 (MQ=255) ccATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGAc < 2:1719114/150‑1 (MQ=255) cATCCCGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACg > 1:3882974/1‑150 (MQ=255) aTCCCGGTACCAAAATCATCCAGCCCCAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGc > 2:1969622/1‑150 (MQ=255) cccGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAg > 1:1953934/1‑150 (MQ=255) cccGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAg > 1:4498665/1‑150 (MQ=255) cccGGAACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGCTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAg > 1:4498578/1‑150 (MQ=255) cGGTACCAAACTCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCATTGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAATCGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAggg < 1:3730746/150‑1 (MQ=255) | CCCGCGACAATAGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAGGG > CP009273/3671915‑3672210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |