| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,716,399 | C→A | 12.8% | A453A (GCG→GCT) | glyS ← | glycine tRNA synthetase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,716,399 | 0 | C | A | 12.8% | 1046.2 / 82.3 | 297 | A453A (GCG→GCT) | glyS | glycine tRNA synthetase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (146/113); new base A (20/18); total (166/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 301 total aligned reads displayed.
CGTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGAACTC > CP009273/3716252‑3716548 | cGTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGc > 2:3053733/1‑150 (MQ=255)cGTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGc < 1:2071986/150‑1 (MQ=255) gCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAgcg > 2:3303209/1‑150 (MQ=255) cAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAgcgc > 2:2967675/1‑150 (MQ=255) cAAGGTTGAGGTTCTTCTCCACGTTAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAg < 2:1240731/150‑1 (MQ=255) cAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAg < 2:2871108/150‑1 (MQ=255) aaGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGc > 2:1625289/1‑150 (MQ=255) ggTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTa > 2:1821962/1‑150 (MQ=255) gTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTAc > 2:4196731/1‑150 (MQ=255) ttcttcTCAACGATAATTCGCAGCACTCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTg < 2:4606809/150‑1 (MQ=255) ttcttcTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTg < 1:1735372/150‑1 (MQ=255) ttcttcTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTg < 2:3214310/150‑1 (MQ=255) ttcttcTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTg > 2:2195648/1‑150 (MQ=255) tcttctCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTgg > 2:2770965/1‑150 (MQ=255) ttctCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGAc < 1:3844931/150‑1 (MQ=255) tcAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGc < 1:2841979/150‑1 (MQ=255) aaCGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAg > 1:909045/1‑150 (MQ=255) cGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGt > 1:1397083/1‑150 (MQ=255) cGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGt > 1:2423558/1‑150 (MQ=255) gATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtc < 2:264292/150‑1 (MQ=255) tAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtcat < 2:4038727/150‑1 (MQ=255) aTTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGACGATACCCGCCAGGGTATCCATATTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtcatca < 2:440999/150‑1 (MQ=255) aTTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtcatca > 2:4538440/1‑150 (MQ=255) cagcaCGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGc > 1:1137705/1‑150 (MQ=255) cagcaCGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGc > 2:680160/1‑150 (MQ=255) cGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAAc > 2:1916479/1‑150 (MQ=255) aGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCACAACGCGGc > 2:2030327/1‑150 (MQ=255) aGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGc > 1:328004/1‑150 (MQ=255) aGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCAGCACCAGCAAAACGCGGc > 1:561859/1‑150 (MQ=255) gcgcGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCt < 2:633445/150‑1 (MQ=255) ggCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATa < 1:1911595/150‑1 (MQ=255) gCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATAc > 1:3791087/1‑150 (MQ=255) acgacgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTg > 1:1220758/1‑150 (MQ=255) gacgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCt > 2:4344976/1‑150 (MQ=255) acgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTc > 2:3555076/1‑150 (MQ=255) acgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTc < 2:3504183/150‑1 (MQ=255) acgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTc > 2:3650612/1‑150 (MQ=255) cgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCa > 1:627223/1‑150 (MQ=255) cgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCa < 2:777118/150‑1 (MQ=255) gCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCAt > 2:2388031/1‑150 (MQ=255) cAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCAtt < 2:4123727/150‑1 (MQ=255) cAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAgcg > 1:1517346/1‑150 (MQ=255) aaaCGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAgcgc > 1:4366923/1‑150 (MQ=255) aaaCGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAgcgc > 1:852834/1‑150 (MQ=255) aCGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCa < 1:2726577/150‑1 (MQ=255) gggTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCAcc < 1:1880222/150‑1 (MQ=255) ggTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACcg < 1:1446114/150‑1 (MQ=255) ggTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACACGCTACTGGGTTGGACGGCAGGTCATCACCAGCAACACGCGGCTGATACTGCTCATTCAGCGCCACcg < 2:2175941/150‑1 (MQ=255) gTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCACACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACcgc > 2:1212221/1‑150 (MQ=255) tCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACcgcg < 2:3371620/150‑1 (MQ=255) ttGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATACATCTTTTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACa < 2:1476899/150‑1 (MQ=255) cGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCtt > 1:1015255/1‑150 (MQ=255) cGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCtt > 1:69615/1‑150 (MQ=255) gCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTc < 2:2095021/150‑1 (MQ=255) gCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTc < 2:2132171/150‑1 (MQ=255) gCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTc < 2:4322544/150‑1 (MQ=255) cTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCg < 2:3885539/150‑1 (MQ=255) cTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCg > 1:1770898/1‑150 (MQ=255) tttCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGc < 2:696856/150‑1 (MQ=255) ttCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCt > 2:64006/1‑150 (MQ=255) cGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTc < 1:1237086/150‑1 (MQ=255) cGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTc > 1:1247575/1‑150 (MQ=255) cGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTc > 1:2447705/1‑150 (MQ=255) ggATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCg > 1:2137429/1‑150 (MQ=255) ggATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCg > 1:2137843/1‑150 (MQ=255) tGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCa < 2:3791087/150‑1 (MQ=255) cTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATc > 2:4102267/1‑150 (MQ=255) cTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATc < 2:1780809/150‑1 (MQ=255) tGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCg > 1:16042/1‑150 (MQ=255) aCCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTg > 1:3663314/1‑150 (MQ=255) gATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGAcg < 1:1854137/150‑1 (MQ=255) aTACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGAcgc > 1:2796817/1‑150 (MQ=255) aTACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGAcgc > 1:933200/1‑150 (MQ=255) aCCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACgcgc < 2:1357875/150‑1 (MQ=255) aCCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACgcgc > 2:3742873/1‑150 (MQ=255) ccGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCa > 1:4574771/1‑150 (MQ=255) ccGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCa < 1:3874499/150‑1 (MQ=255) cGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCAt < 1:2963457/150‑1 (MQ=255) gAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATa > 1:465557/1‑150 (MQ=255) gAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGATGATACTGCTCATTAAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATa > 1:1642244/1‑150 (MQ=255) aGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGt > 2:3462792/1‑150 (MQ=255) aCCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCAt > 1:3808117/1‑150 (MQ=255) aCCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCAt > 2:2812699/1‑150 (MQ=255) aCCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCAt > 2:2310345/1‑150 (MQ=255) cGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATccc > 2:1668198/1‑150 (MQ=255) gCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATcccc < 2:3886460/150‑1 (MQ=255) gCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATcccc > 2:1105586/1‑150 (MQ=255) aGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATa < 1:2539240/150‑1 (MQ=255) aGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATa > 1:2238846/1‑150 (MQ=255) gTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACg < 2:872683/150‑1 (MQ=255) tATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGc > 2:3269264/1‑150 (MQ=255) cATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTg > 2:4381224/1‑150 (MQ=255) aTCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTgg > 2:3144958/1‑150 (MQ=255) aTCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTgg < 2:734582/150‑1 (MQ=255) cTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGgt > 1:714243/1‑150 (MQ=255) cAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCgg > 1:3337552/1‑150 (MQ=255) gCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTg < 2:238670/150‑1 (MQ=255) cAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGa > 1:2362670/1‑150 (MQ=255) aaTCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGaa > 2:2425398/1‑150 (MQ=255) cGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGAACTc < 1:3634572/150‑1 (MQ=255) | CGTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGAACTC > CP009273/3716252‑3716548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |