| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,796,691 | T→A | 37.9% | P269P (CCA→CCT) | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,796,691 | 0 | T | A | 37.9% | 288.0 / inf | 288 | P269P (CCA→CCT) | waaB | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (87/91); new base A (56/53); total (144/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 293 total aligned reads displayed.
TATTTATTTAGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTCGA > CP009273/3796542‑3796839 | ttatttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAggg > 2:684911/1‑150 (MQ=255) atttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGaa < 2:2468660/150‑1 (MQ=255) ttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAAc < 1:1067668/150‑1 (MQ=255) agaagaGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCt > 2:302124/1‑150 (MQ=255) aagaGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTc < 2:4612041/150‑1 (MQ=255) agagTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCa > 2:3653527/1‑150 (MQ=255) agagTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGTGAAACCTTCa > 1:2250292/1‑150 (MQ=255) agTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCaaa < 1:1313552/150‑1 (MQ=255) ttACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAg > 2:4133596/1‑150 (MQ=255) aCAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCGGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGAt < 1:2825569/150‑1 (MQ=255) aCAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGAt > 1:1419864/1‑150 (MQ=255) aaaaCCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGa > 2:143563/1‑150 (MQ=255) aaCCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACg < 1:911183/150‑1 (MQ=255) aaCCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACg > 2:778677/1‑150 (MQ=255) ccAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTg > 2:775924/1‑150 (MQ=255) atatCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAAt < 1:1852518/150‑1 (MQ=255) tatCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGACTCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATa > 2:4061799/1‑150 (MQ=255) tctcCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAAc > 2:3385213/1‑150 (MQ=255) ctcCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACg < 2:2798435/150‑1 (MQ=255) tcCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGc > 1:4026386/1‑150 (MQ=255) ggTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGcactc < 1:2023311/150‑1 (MQ=255) ttGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGcactcac < 1:2404831/150‑1 (MQ=255) aCAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACttttt < 2:4204497/150‑1 (MQ=255) aTGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAat < 1:4219264/150‑1 (MQ=255) tGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAata < 1:4461249/150‑1 (MQ=255) cATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCtt < 1:3352988/150‑1 (MQ=255) cATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCtt > 1:1186162/1‑150 (MQ=255) tGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCt > 2:3570759/1‑150 (MQ=255) aCATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAAc < 1:689888/123‑1 (MQ=255) aTCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGAc > 2:1408040/1‑150 (MQ=255) ggTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAAt > 2:4500003/1‑150 (MQ=255) gTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAAtt < 2:2532770/150‑1 (MQ=255) ttGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTc < 2:2136140/150‑1 (MQ=255) aataatGTCAACAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCa < 1:2546662/150‑1 (MQ=255) aataatGTCAACAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCa < 1:593935/150‑1 (MQ=255) taatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACTTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAgg < 2:2207756/150‑1 (MQ=255) aatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAggg > 2:2679252/1‑150 (MQ=255) atGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGa < 1:3290034/150‑1 (MQ=255) agcagGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttg > 1:1892677/1‑150 (MQ=255) gcagGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttgt < 2:4202691/150‑1 (MQ=255) cagGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttgtt > 1:349280/1‑150 (MQ=255) agGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttgttg > 2:3776752/1‑150 (MQ=255) gCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGcc > 2:1338630/1‑150 (MQ=255) gCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGcc > 2:4017416/1‑150 (MQ=255) cGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAAc > 1:1450332/1‑150 (MQ=255) cGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAAc > 2:786179/1‑150 (MQ=255) ggAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAAcc < 1:76305/150‑1 (MQ=255) agaCACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCAt > 2:3446443/1‑150 (MQ=255) gaCACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATa < 2:1154504/150‑1 (MQ=255) cacaATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATAcc > 1:2306111/1‑150 (MQ=255) cacaATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATAcc > 1:4633129/1‑150 (MQ=255) acaATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCa < 1:461083/150‑1 (MQ=255) caATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAg > 2:3242881/1‑150 (MQ=255) caATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAg > 2:4644445/1‑150 (MQ=255) caATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAg < 1:141257/150‑1 (MQ=255) cGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACaa > 1:3129896/1‑150 (MQ=255) cGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACaa > 1:807275/1‑150 (MQ=255) cGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACaa < 2:1653365/150‑1 (MQ=255) ggCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAAt > 2:3746637/1‑150 (MQ=255) ggCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAAt < 1:1018742/150‑1 (MQ=255) cACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTc < 2:3460664/150‑1 (MQ=255) cACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTc < 2:2029707/150‑1 (MQ=255) aCTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCg > 1:1656291/1‑150 (MQ=255) tGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGat < 1:1068723/150‑1 (MQ=255) tGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGat < 1:873348/150‑1 (MQ=255) aCAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGatcatc > 1:497983/1‑150 (MQ=255) aaGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCaa < 2:743157/150‑1 (MQ=255) aaGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCaa < 2:4208760/150‑1 (MQ=255) gAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAatat > 1:1024321/1‑150 (MQ=255) aaTCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATAtt < 2:2707773/150‑1 (MQ=255) aaTCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATAtt < 2:1008726/150‑1 (MQ=255) ccccACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAAt > 1:459782/1‑150 (MQ=255) ccACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATtc < 2:4403704/150‑1 (MQ=255) ccACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATtc < 2:716894/150‑1 (MQ=255) cGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTctct < 1:4349813/150‑1 (MQ=255) gACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTa > 2:1992529/1‑150 (MQ=255) gACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTa > 1:39706/1‑150 (MQ=255) cAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTAcc > 2:1199136/1‑150 (MQ=255) cAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTAcc < 2:4338155/150‑1 (MQ=255) gCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATaa < 1:3205148/150‑1 (MQ=255) tCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGcc > 1:3070488/1‑150 (MQ=255) cAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCt > 2:1908437/1‑150 (MQ=255) aaGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTg < 2:1607502/150‑1 (MQ=255) aaGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTg < 1:3814216/150‑1 (MQ=255) aGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTgg < 2:4272398/150‑1 (MQ=255) gTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGc < 2:2318515/150‑1 (MQ=255) gTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGc < 2:1480188/150‑1 (MQ=255) tAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCa < 2:294018/150‑1 (MQ=255) tAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCa > 1:4043360/1‑150 (MQ=255) tAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCa < 1:1914653/150‑1 (MQ=255) gggTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCAtt > 2:2883028/1‑150 (MQ=255) gggTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCAtt > 2:2992011/1‑150 (MQ=255) gTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCAtttt > 2:1566741/1‑150 (MQ=255) gTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCAtttt > 2:3947958/1‑150 (MQ=255) cATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTc > 2:1760913/1‑150 (MQ=255) cATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTc > 2:3691090/1‑150 (MQ=255) aTTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTCg > 1:875122/1‑150 (MQ=255) aTTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTCg > 1:393669/1‑150 (MQ=255) ttGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTCGa > 2:2621587/1‑150 (MQ=255) ttGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACAATAAGCCTGGCATTTTTCGa > 1:3671301/1‑150 (MQ=255) | TATTTATTTAGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTCGA > CP009273/3796542‑3796839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |