| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,799,227 | G→T | 17.9% | V28V (GTC→GTA) | waaP ← | kinase that phosphorylates core heptose of lipopolysaccharide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,799,227 | 0 | G | T | 17.9% | 853.1 / 117.7 | 284 | V28V (GTC→GTA) | waaP | kinase that phosphorylates core heptose of lipopolysaccharide |
| Reads supporting (aligned to +/- strand): ref base G (119/114); new base T (28/23); total (147/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 285 total aligned reads displayed.
CACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATCCTGAGTATCGGC > CP009273/3799078‑3799374 | aCTCTCTGTCTGCGCCCAAAACGGGCATCAGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGa < 1:1681924/150‑1 (MQ=255) tctctGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGAcc < 2:3431490/150‑1 (MQ=255) tctctGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGAcc > 2:1286956/1‑150 (MQ=255) tctgtctgCGCCCAAAACGGGCATCAGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTc < 2:3026075/150‑1 (MQ=255) tctgtctgCGCCCAAAACGGGCATCAGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTc < 2:3025756/150‑1 (MQ=255) gtctgCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGcc < 1:2522544/150‑1 (MQ=255) gcgcCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTc < 1:570531/150‑1 (MQ=255) cccAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATATCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCCGTTCACGAAATACCTCGCCGTTCAGt > 1:902703/1‑150 (MQ=255) ccAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGtt < 1:2063710/150‑1 (MQ=255) cAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGttt > 1:3160982/1‑150 (MQ=255) cAAAACGGGCATCAGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGttt > 2:4599554/1‑150 (MQ=255) aaaCGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGttttt > 2:3236656/1‑150 (MQ=255) aaCGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGtttttt > 2:466306/1‑150 (MQ=255) aaCGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGtttttt < 2:1059630/150‑1 (MQ=255) cGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGa < 2:3348310/150‑1 (MQ=255) tCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTg < 2:869515/150‑1 (MQ=255) ccGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGc < 1:787901/150‑1 (MQ=255) agCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCa > 2:2244359/2‑150 (MQ=255) aaTGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCaaaa > 2:2203123/1‑150 (MQ=255) gagaGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCa > 1:2431816/1‑150 (MQ=255) agagTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTTTGCCATTTAATAAAATAGCTTTTCCCGGACAGTTCAAATCGTAATGAACCACCAGTCTCCAGTTCACGAAAGACCACGCCGTTAAGTTTTTTGAGCTCAGAAAAAGCaa > 1:4115659/1‑149 (MQ=255) agagTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCAt < 2:4392281/150‑1 (MQ=255) agagTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCAt > 2:986787/1‑150 (MQ=255) gagTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATc < 1:1343956/150‑1 (MQ=255) tAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCttt > 2:1083804/1‑150 (MQ=255) tAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCttt > 1:2290360/1‑150 (MQ=255) tAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCttt > 1:4222030/1‑150 (MQ=255) tAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCttt < 1:3891313/150‑1 (MQ=255) gATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTAc < 2:3306767/150‑1 (MQ=255) gATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTAc < 1:1817439/150‑1 (MQ=255) tttATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGc > 1:3369061/1‑150 (MQ=255) tataATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCa < 1:1045044/150‑1 (MQ=255) tataATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCa < 2:3836099/150‑1 (MQ=255) ataATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCaa > 2:1744065/1‑150 (MQ=255) ataATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCaa > 1:3215853/1‑150 (MQ=255) taATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCaaa < 2:1704024/150‑1 (MQ=255) aTCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAgt > 1:2123359/1‑150 (MQ=255) ctctTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAgtgt > 1:1183295/1‑150 (MQ=255) ctctTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAgtgt > 1:939718/1‑150 (MQ=255) tctTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTGCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGtgtg > 2:2874847/1‑150 (MQ=255) tttAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGCGGCa < 2:4119098/150‑1 (MQ=255) tttAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGCGGCa < 2:1992930/150‑1 (MQ=255) ttAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCaa < 1:2019232/150‑1 (MQ=255) ttAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCaa > 2:435847/1‑150 (MQ=255) tAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAg < 2:2273311/150‑1 (MQ=255) tAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAg > 2:4347419/1‑150 (MQ=255) aaTGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAATTGTGGCAAGc > 2:38106/1‑150 (MQ=255) tcgtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGct < 2:4055312/150‑1 (MQ=255) gtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGctct > 2:1726437/1‑150 (MQ=255) tcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCtt < 2:93477/150‑1 (MQ=255) cccTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCtttt > 2:350688/1‑150 (MQ=255) cccTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCtttt > 2:450728/1‑150 (MQ=255) cccTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCtttt < 2:1446497/150‑1 (MQ=255) cTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTaa > 2:1025065/1‑150 (MQ=255) tgtgCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAAtt < 2:1101993/150‑1 (MQ=255) tgCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCa < 1:764632/150‑1 (MQ=255) ccATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAAc < 2:2851354/150‑1 (MQ=255) aTTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCa > 2:2369163/1‑150 (MQ=255) tAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCt < 2:4378704/150‑1 (MQ=255) aaGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTa < 2:3139562/150‑1 (MQ=255) aaGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTa > 1:2885582/1‑150 (MQ=255) aGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTaa > 1:686087/1‑150 (MQ=255) gAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTaaa > 1:1612641/1‑150 (MQ=255) gAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTaaa > 1:3064420/1‑150 (MQ=255) tAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAaccacc > 2:2686975/1‑150 (MQ=255) gCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTg > 2:1245339/1‑150 (MQ=255) cTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGt < 2:3581165/150‑1 (MQ=255) cTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTAAACCATCTAAACCACCTGt > 1:1599098/1‑150 (MQ=255) cTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGATCACGAAAGACCTCGCCGTTCAGTTTTATGACCTCTGCAAAAGCATCATTACCACGCCAAAGAGTGGCAAGCGGCAATTTTAATTCAACCATATAAACCACCTGt > 2:1365507/1‑150 (MQ=255) ttCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAAt < 2:1605353/150‑1 (MQ=255) tCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATg < 1:142927/150‑1 (MQ=255) ccGGACNGTTCAAAGCGTAATGTACGACGAGTCNCCAGTTCACNAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGat < 1:3131622/150‑1 (MQ=255) ggACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCCAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGatat > 2:4527490/1‑150 (MQ=255) ggACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGatat > 1:335879/1‑150 (MQ=255) gACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATc > 1:2395836/1‑150 (MQ=255) gACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCGGTAATGATATc > 1:44869/1‑150 (MQ=255) aCAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATcc < 2:3337218/150‑1 (MQ=255) aCAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATcc < 2:644667/150‑1 (MQ=255) aGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCcgc > 2:4148655/1‑150 (MQ=255) aGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCcgc < 2:3215853/150‑1 (MQ=255) aaaGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCATTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACAACCTGTAATGATATCCGCGGCtt < 2:4011716/150‑1 (MQ=255) gCGTAATGTACGACGAGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCttttt < 1:4396861/150‑1 (MQ=255) aaTGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTgg > 2:2992143/1‑150 (MQ=255) tGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCCCGCCAACGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCa < 1:2008540/150‑1 (MQ=255) acgaGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCtat > 2:546793/1‑150 (MQ=255) acgaGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCGGTAATGATATCCGCGGCTTTTTCTGGCAAGCtat > 1:1631085/1‑150 (MQ=255) cgaGTCTCCAGTTCACGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCtata < 2:2161796/150‑1 (MQ=255) cgaGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCtata > 1:2193349/1‑150 (MQ=255) gaGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATAc > 2:1113568/1‑150 (MQ=255) gTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTTACCTCAGCAAAATCATCTTTACCACCCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAAACACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACaa > 1:1329855/1‑150 (MQ=255) ctcCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAAt < 2:4314972/150‑1 (MQ=255) ccAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCCAGCTATACAAATcc > 1:993908/1‑150 (MQ=255) ccAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATcc > 1:3555617/1‑150 (MQ=255) ccAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATcc > 1:2569637/1‑150 (MQ=255) cAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATCCt < 2:1215422/150‑1 (MQ=255) ttCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATACagag > 1:3745230/1‑150 (MQ=255) aCGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATCCTGAGTAt < 2:1179204/150‑1 (MQ=255) cGAAATACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCCAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATCCTGAGTATc > 2:20911/1‑150 (MQ=255) aaaGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATCCTGAGTATCgg < 2:2624329/150‑1 (MQ=255) aaGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTAAACCATCTAAACCACCTGGAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATCCTGAGTATCGGc > 1:2945138/1‑150 (MQ=255) | CACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCTGGCAAGCTATACAAATCCTGAGTATCGGC > CP009273/3799078‑3799374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |