| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,864,463 | C→A | 35.6% | D210Y (GAT→TAT) | dgoT ← | D‑galactonate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,864,463 | 0 | C | A | 35.6% | 377.9 / 229.6 | 241 | D210Y (GAT→TAT) | dgoT | D‑galactonate transporter |
| Reads supporting (aligned to +/- strand): ref base C (69/86); new base A (41/44); total (110/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 241 total aligned reads displayed.
AAAACCACAGTGTAGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATCCAGA > CP009273/3864316‑3864609 | cacaGTGTAGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATg > 2:953294/1‑150 (MQ=255) cacaGTGTAGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATg > 1:2652657/1‑150 (MQ=255) aGTGTAGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTaa > 1:3794449/1‑150 (MQ=255) aGTGTAGAAGCCACCGCAAATTGCCCAAGAGAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTaa > 1:2379332/1‑150 (MQ=255) gtgtAGAAGCCACCGCAAATTGCACAAGTTAAACGCAGATCAGTTTTCGATGGAACACCAGTTTCCAGTCTTTGGCTGTTATCGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATTACGAATTTAAt < 2:1816934/150‑1 (MQ=255) tgtAGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATc > 2:4332028/1‑150 (MQ=255) tAGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCa < 1:1073744/150‑1 (MQ=255) aGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAg > 1:4258856/1‑150 (MQ=255) gAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGt > 2:642121/1‑150 (MQ=255) gAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGt < 2:2372329/150‑1 (MQ=255) gAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGt > 2:477582/1‑150 (MQ=255) aaGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGtt > 1:374133/1‑150 (MQ=255) aaGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGtt > 2:31014/1‑150 (MQ=255) aaGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGtt > 1:2041461/1‑150 (MQ=255) aGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTc < 2:3384538/150‑1 (MQ=255) gCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCa < 2:4551873/150‑1 (MQ=255) cAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGc > 2:2700697/1‑150 (MQ=255) aaaTTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCt > 1:2544467/1‑150 (MQ=255) ttGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGAt < 2:184491/150‑1 (MQ=255) cccAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATAcc > 1:607708/1‑150 (MQ=255) ccAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCt < 1:449877/150‑1 (MQ=255) cAAGATAAACGCCGATCCGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCtt > 2:3963425/1‑150 (MQ=255) aaGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCGTAACGAATGTAATCCAGTTCAGCTTTGCTGATACCttt < 2:1361338/150‑1 (MQ=255) aaGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCttt > 2:1943183/1‑150 (MQ=255) aaGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCttt > 1:3057406/1‑150 (MQ=255) aGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTg < 1:3287907/150‑1 (MQ=255) aGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTg > 2:1525341/1‑150 (MQ=255) aGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTg > 2:4168283/1‑150 (MQ=255) aGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTg > 1:756099/1‑150 (MQ=255) gATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTgg < 2:1344295/150‑1 (MQ=255) tAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTc < 1:1093233/150‑1 (MQ=255) aaaCGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCa > 1:1665434/1‑150 (MQ=255) gCCGATCAGTTTACGATGGAACACCATTTTCCAGTCTTTGGATGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACTAATGTAATCCATTTCAGCTTTGCTGATACCTTTGGTCAGgcg < 1:1723234/150‑1 (MQ=255) gCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGgcg < 1:4218141/150‑1 (MQ=255) ccGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGgcgc > 2:2791202/1‑150 (MQ=255) ccGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAAAGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGgcgc < 1:2624689/150‑1 (MQ=255) tCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCgcggcg < 2:1237681/150‑1 (MQ=255) cAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGcggcgg > 2:1184823/1‑150 (MQ=255) ttACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGa > 1:3858354/1‑150 (MQ=255) tACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGAt < 2:4512507/150‑1 (MQ=255) tACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGAt < 2:3479047/150‑1 (MQ=255) aCGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATa < 1:4417232/150‑1 (MQ=255) cGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATaa < 1:901389/150‑1 (MQ=255) cGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATaa < 1:3837184/150‑1 (MQ=255) tGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAAcc < 2:3243523/150‑1 (MQ=255) ggAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCt < 1:4087686/150‑1 (MQ=255) gAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCtt < 1:1634000/150‑1 (MQ=255) aaCACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTa > 2:2008713/1‑150 (MQ=255) cacCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTaaa < 1:3564426/150‑1 (MQ=255) acCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAAc < 2:4642620/150‑1 (MQ=255) acCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAAc < 1:1984603/150‑1 (MQ=255) cAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCa < 2:1699163/150‑1 (MQ=255) cAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCAACATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAAACa < 1:102887/150‑1 (MQ=255) tCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCa < 1:3953051/150‑1 (MQ=255) ccAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTTAACCAAATCAg < 2:3463607/150‑1 (MQ=255) ccAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAg < 2:1140351/150‑1 (MQ=255) ccAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAg > 2:3912870/1‑150 (MQ=255) gTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGa < 1:2729394/150‑1 (MQ=255) gTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGa < 1:3154449/150‑1 (MQ=255) cTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGAcc < 1:1324895/150‑1 (MQ=255) tGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGa < 2:3812121/150‑1 (MQ=255) ggCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGAt < 1:2237129/150‑1 (MQ=255) gCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATa < 1:4543218/150‑1 (MQ=255) cTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATaa < 2:4136916/150‑1 (MQ=255) tGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAAt < 2:2447647/150‑1 (MQ=255) gTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATg < 2:20163/150‑1 (MQ=255) ttAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGc > 2:431163/1‑150 (MQ=255) ttAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGc < 1:2078296/150‑1 (MQ=255) tAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGcc > 2:3572082/1‑150 (MQ=255) aCGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTTATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGa < 1:2798596/150‑1 (MQ=255) ggCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATa < 2:3573100/150‑1 (MQ=255) tGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATacca > 1:3531084/1‑150 (MQ=255) aCGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATaccacc < 1:2394258/150‑1 (MQ=255) cgcgCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATAccacca < 2:2719678/150‑1 (MQ=255) ctctTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGAc > 2:3895170/1‑150 (MQ=255) tctttcttCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACa < 1:3895117/150‑1 (MQ=255) tctttcttCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACa < 2:3472065/150‑1 (MQ=255) ctttcttCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACaa > 1:4230826/1‑150 (MQ=255) ctttcttCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACaa > 2:286709/1‑150 (MQ=255) tttcttCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGAGGCGGCTGATATAGCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAAt < 1:2208595/150‑1 (MQ=255) tttcttCACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAAt < 2:2854158/150‑1 (MQ=255) ttcttcACCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATg < 2:3322844/150‑1 (MQ=255) tcttcACCGGCGCATCACCAGCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGa < 2:588539/150‑1 (MQ=255) aCCGGCGCATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACAcc > 1:3076300/1‑150 (MQ=255) gcATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGc > 1:1441650/1‑150 (MQ=255) gcATCACCATCCACCAGACCGCCGCCATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGc < 2:3057406/150‑1 (MQ=255) tCCACCAGACCGCCGCCATCACTAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCTACCAGATAATGCCGATACCACCAGTGACAATGAACACACAGTGCCAGCTCAAc < 2:3730338/150‑1 (MQ=255) tCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAAc < 2:1840902/150‑1 (MQ=255) aGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTcc < 1:3963361/150‑1 (MQ=255) gACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCt > 2:2542319/1‑150 (MQ=255) gACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCt < 2:4059057/150‑1 (MQ=255) cgccgcCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGaa > 2:390676/1‑150 (MQ=255) cgccgcCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGaa > 2:427212/1‑150 (MQ=255) cgccATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATcc < 1:4168278/150‑1 (MQ=255) gccATCTCTATTGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCTGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCCGTGCCAGCTCAACATCTCCTGAATCCa < 1:473400/150‑1 (MQ=255) ccATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATCCAg > 1:392201/1‑150 (MQ=255) ccATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATCCAg > 1:3738985/1‑150 (MQ=255) cATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATCCAGa > 2:221437/1‑150 (MQ=255) cATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATCCAGa > 1:3768154/1‑150 (MQ=255) cATAACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATCCAGa < 1:3364010/150‑1 (MQ=255) | AAAACCACAGTGTAGAAGCCACCGCAAATTGCCCAAGATAAACGCCGATCAGTTTACGATGGAACACCAGTTTCCAGTCTTTGGCTGTTAACGGCTGACGCGCCTCTTTCTTCACCGGCGCATCACCATCCACCAGACCGCCGCCATCACGAATGTAATCCAGTTCAGCTTTGCTGATACCTTTGGTCAGGCGCGGCGGCTGATAAACCTTAAACCAAATCAGCGACCAGATAATGCCGATACCACCAGTGACAATGAACACCCAGTGCCAGCTCAACATCTCCTGAATCCAGA > CP009273/3864316‑3864609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |