| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,867,062 | C→A | 14.3% | R258L (CGC→CTC) | dgoK ← | 2‑oxo‑3‑deoxygalactonate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,867,062 | 0 | C | A | 14.3% | 893.8 / 81.7 | 263 | R258L (CGC→CTC) | dgoK | 2‑oxo‑3‑deoxygalactonate kinase |
| Reads supporting (aligned to +/- strand): ref base C (122/103); new base A (14/23); total (136/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.64e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 269 total aligned reads displayed.
CTCGTCGGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCG > CP009273/3866913‑3867211 | tcgGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAgcgcgc > 1:4326269/1‑150 (MQ=255) cgGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGcgcgcg > 2:2232927/1‑150 (MQ=255) cgGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGcgcgcg > 2:3061727/1‑150 (MQ=255) cGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCTCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCa < 1:4190526/150‑1 (MQ=255) cGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCTCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCa < 1:1860420/150‑1 (MQ=255) cGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCa < 1:2895690/150‑1 (MQ=255) gTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAg > 2:1533584/1‑150 (MQ=255) aaTACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCg > 2:4241376/1‑150 (MQ=255) aaTACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCg > 1:2507862/1‑150 (MQ=255) aTACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGa > 1:1579427/1‑150 (MQ=255) tACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGAt < 1:3582378/150‑1 (MQ=255) ccGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGt < 2:2975586/150‑1 (MQ=255) ccGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGt < 2:2975580/150‑1 (MQ=255) aaaaTGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGc > 1:1314391/1‑150 (MQ=255) aaTGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGa < 2:2831086/150‑1 (MQ=255) ggCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACaa < 2:2686027/150‑1 (MQ=255) tCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTg > 1:4439970/1‑150 (MQ=255) tCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTg > 1:3641489/1‑150 (MQ=255) aGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGAt > 1:2492001/1‑150 (MQ=255) gCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATg > 2:4538094/1‑150 (MQ=255) cGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATgg < 2:744811/150‑1 (MQ=255) gggAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGc < 1:4497892/150‑1 (MQ=255) gggAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGc > 1:816979/1‑150 (MQ=255) gggAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGc > 1:4185111/1‑150 (MQ=255) agtttagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCgtg > 1:4588062/1‑150 (MQ=255) gtttagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCgtgt > 1:106668/1‑150 (MQ=255) tttagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGtt < 1:3148599/150‑1 (MQ=255) tttagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGtt < 2:1937721/150‑1 (MQ=255) tagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGa < 2:850362/150‑1 (MQ=255) gtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATg > 2:1183662/1‑150 (MQ=255) tttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATgg > 2:590052/1‑150 (MQ=255) ttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATggg > 2:1404918/1‑150 (MQ=255) gCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGcc < 1:86256/150‑1 (MQ=255) ccACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCca < 1:395948/150‑1 (MQ=255) cTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACAt < 2:2000731/150‑1 (MQ=255) tGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATa > 1:2857302/1‑150 (MQ=255) gCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAg < 2:2385942/150‑1 (MQ=255) aTGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTc > 2:4390107/1‑150 (MQ=255) aTGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTc < 1:2226504/150‑1 (MQ=255) aTGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTc < 1:2537985/150‑1 (MQ=255) tGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTACGTCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTcg > 1:3485888/1‑150 (MQ=255) gAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTcgc > 1:193367/1‑150 (MQ=255) gAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTcgc < 1:4533071/150‑1 (MQ=255) aGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTcgcg > 1:201036/1‑150 (MQ=255) cGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCa < 2:3947173/150‑1 (MQ=255) gATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCAt > 2:226565/1‑150 (MQ=255) gATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCAt < 2:4516395/150‑1 (MQ=255) gCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACt > 2:1966552/1‑150 (MQ=255) tCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTgg > 1:1039990/1‑150 (MQ=255) cTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCg > 1:921521/1‑150 (MQ=255) cTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCg < 2:1836092/150‑1 (MQ=255) ttATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGa < 2:1872077/150‑1 (MQ=255) taCCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACct < 1:3773528/150‑1 (MQ=255) taCCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACct < 1:2981456/150‑1 (MQ=255) ccAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACctct < 2:3471243/150‑1 (MQ=255) cAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTg < 1:1162669/150‑1 (MQ=255) aGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTgc > 2:3158155/1‑150 (MQ=255) tGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCa < 1:398036/150‑1 (MQ=255) aTGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATca < 2:242691/150‑1 (MQ=255) aTGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATca < 2:4074942/150‑1 (MQ=255) ccGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCCTCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATcaaca < 2:1529382/150‑1 (MQ=255) ccGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATcaaca < 2:3917696/150‑1 (MQ=255) gtgtCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACaaa > 1:301130/1‑150 (MQ=255) gtgtCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACaaa < 2:3827234/150‑1 (MQ=255) gtgtCGCCAGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGATGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAAGCAACaaa > 1:1198743/1‑150 (MQ=255) tCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCa < 1:3549152/150‑1 (MQ=255) tCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCa < 1:4118977/150‑1 (MQ=255) cgcccgccACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCag > 1:3343809/1‑150 (MQ=255) cgcccgccACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCag > 1:3395563/1‑150 (MQ=255) cgcccgccACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCag > 2:1695634/1‑150 (MQ=255) cgccgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTc < 2:1045719/150‑1 (MQ=255) ccgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGc < 2:263256/150‑1 (MQ=255) cgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCt > 1:2677617/1‑150 (MQ=255) cgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCt > 1:1906482/1‑150 (MQ=255) gTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTg > 2:597723/1‑150 (MQ=255) cACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGAc < 1:2210278/150‑1 (MQ=255) gCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTc > 1:4044231/1‑150 (MQ=255) gCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTc < 1:1386965/150‑1 (MQ=255) gCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCAACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTc < 1:3811865/150‑1 (MQ=255) gCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTc > 1:2277084/1‑150 (MQ=255) cAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTcg > 2:2145168/1‑150 (MQ=255) aaCCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTcgc > 1:271331/1‑150 (MQ=255) aCCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTcgcg > 1:3318817/1‑150 (MQ=255) aCCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTcgcg < 2:330598/150‑1 (MQ=255) cccATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCgg < 2:1272676/150‑1 (MQ=255) ccATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCggg > 1:909195/1‑150 (MQ=255) ccATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCggg < 2:1758098/150‑1 (MQ=255) cATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCgggg > 2:1128594/1‑150 (MQ=255) cATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCgggg < 2:2545107/150‑1 (MQ=255) cGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCACCAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAg < 2:70104/150‑1 (MQ=255) cGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAg > 2:2049389/1‑150 (MQ=255) cGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAg > 2:2567343/1‑150 (MQ=255) ccTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgtg > 2:1675518/1‑150 (MQ=255) tGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGtt < 1:1946183/150‑1 (MQ=255) gAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTc < 2:3275490/150‑1 (MQ=255) aGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCa < 1:835231/150‑1 (MQ=255) ttGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGcac > 1:4212911/1‑150 (MQ=255) tGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGcaca > 2:2098627/1‑150 (MQ=255) tGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGc > 1:3259649/1‑150 (MQ=255) aGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAgg < 1:4143436/150‑1 (MQ=255) | CTCGTCGGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCG > CP009273/3866913‑3867211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |