| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,889,578 | C→A | 16.0% | R131L (CGC→CTC) | purP ← | adenine permease, high affinity; adenine:H+ symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,889,578 | 0 | C | A | 16.0% | 922.1 / 103.1 | 286 | R131L (CGC→CTC) | purP | adenine permease, high affinity; adenine:H+ symporter |
| Reads supporting (aligned to +/- strand): ref base C (116/124); new base A (16/30); total (132/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 292 total aligned reads displayed.
CAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA > CP009273/3889430‑3889727 | aTTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGaa < 1:4644927/150‑1 (MQ=255) ttACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGaaa > 2:1242162/1‑150 (MQ=255) tACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGaaaa < 2:4358282/150‑1 (MQ=255) cGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCg < 1:642686/150‑1 (MQ=255) aTGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTc > 1:45332/1‑150 (MQ=255) aTGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTc > 2:1384505/1‑150 (MQ=255) aTGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTc > 1:177004/1‑150 (MQ=255) aTGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTc < 1:4379484/150‑1 (MQ=255) aTGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTc < 2:1270487/150‑1 (MQ=255) gCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCTATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAg > 2:4121261/1‑150 (MQ=255) cTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGt > 2:287338/1‑150 (MQ=255) cACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTaa < 2:4547831/150‑1 (MQ=255) cACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTaa < 1:1471664/150‑1 (MQ=255) aGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAAcagc > 2:3889418/1‑150 (MQ=255) gCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAAcagca < 1:1973802/150‑1 (MQ=255) cGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAAcagcag > 2:3751413/1‑150 (MQ=255) gTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGa > 2:2047689/1‑150 (MQ=255) gTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGa > 1:4248812/1‑150 (MQ=255) gTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGa > 1:1450696/1‑150 (MQ=255) tttCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGAc < 2:1151972/150‑1 (MQ=255) tCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCt < 1:1514423/150‑1 (MQ=255) ggTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATcg > 1:1608944/1‑150 (MQ=255) cGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGcccc < 1:1392813/150‑1 (MQ=255) cGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGcccc < 1:2821145/150‑1 (MQ=255) cAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCaga > 1:1029725/1‑150 (MQ=255) aaTCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGACTGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCagaa > 2:40156/1‑150 (MQ=255) tCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCagaaga > 2:879373/1‑150 (MQ=255) cacaCCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGAt > 2:1450842/1‑150 (MQ=255) cacaCCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGAt < 1:2987342/150‑1 (MQ=255) acacCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGAtt < 2:860106/150‑1 (MQ=255) cacCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTg > 2:3648047/1‑150 (MQ=255) cGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCa > 2:2496796/1‑150 (MQ=255) cGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCa > 1:2068752/1‑150 (MQ=255) gTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGAAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCAt > 2:2777543/1‑150 (MQ=255) tttttCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATc > 1:2484535/1‑150 (MQ=255) tttCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATccc < 1:1590663/150‑1 (MQ=255) tttCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATccc < 1:1037406/150‑1 (MQ=255) gCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCt < 1:1367721/150‑1 (MQ=255) cccATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGc > 2:3836743/1‑150 (MQ=255) ccATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGcc < 2:3339775/150‑1 (MQ=255) catcatGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCa > 1:388686/1‑150 (MQ=255) atcatGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCAc < 1:1875172/150‑1 (MQ=255) aaCAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATc < 1:3134114/150‑1 (MQ=255) aCAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCg > 2:2921055/1‑150 (MQ=255) cAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGc > 2:4525882/1‑150 (MQ=255) cAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGc > 2:2621408/1‑150 (MQ=255) aGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGcc > 1:4124073/1‑150 (MQ=255) gACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCt > 1:2264784/1‑150 (MQ=255) cGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTa < 1:3547529/150‑1 (MQ=255) cGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTa > 1:576491/1‑150 (MQ=255) aCCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCGGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAAc < 1:2028756/150‑1 (MQ=255) cTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACa > 1:376809/1‑150 (MQ=255) tGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaa < 1:1210594/150‑1 (MQ=255) ggTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaa < 1:3384806/150‑1 (MQ=255) ggTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaa > 2:3082991/1‑150 (MQ=255) ggTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaa < 2:3197088/150‑1 (MQ=255) ggTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaa > 2:148865/1‑150 (MQ=255) aaTACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGc > 1:4314395/1‑150 (MQ=255) aTACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCg > 1:4476741/1‑150 (MQ=255) aTACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCg > 1:3191632/1‑150 (MQ=255) aTACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCg > 1:3839050/1‑150 (MQ=255) tACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCga > 1:2180940/1‑150 (MQ=255) aCCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCgaa > 1:2857023/1‑150 (MQ=255) cccACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCgaag < 1:3958055/150‑1 (MQ=255) cccACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCgaag > 2:1332966/1‑150 (MQ=255) cacaCGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCgaagaa > 2:1433972/1‑150 (MQ=255) acacGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAAc > 1:4040928/1‑150 (MQ=255) cacGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACg < 1:287338/150‑1 (MQ=255) ctcAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCa > 1:507330/3‑150 (MQ=255) aGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTc > 1:1775384/1‑150 (MQ=255) aGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTc > 1:3445669/1‑150 (MQ=255) aGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTc > 1:1621627/1‑150 (MQ=255) aGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTc > 1:802812/1‑150 (MQ=255) aCTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAg < 2:177004/150‑1 (MQ=255) tCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGc > 1:882007/1‑150 (MQ=255) cACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGcc < 1:4636517/150‑1 (MQ=255) aCCGGAATGTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGccc < 2:3037283/150‑1 (MQ=255) ggAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATa < 2:2388467/150‑1 (MQ=255) gTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCggg < 1:2722808/150‑1 (MQ=255) gTTGGCTATCATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCggg < 1:3353187/150‑1 (MQ=255) ttGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGt < 1:4610391/150‑1 (MQ=255) tGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTg > 2:2175457/1‑150 (MQ=255) gCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGcc < 2:1670357/150‑1 (MQ=255) atcatcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGt > 1:371200/1‑150 (MQ=255) tcatcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTg < 1:4017031/150‑1 (MQ=255) atcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCa < 2:1819877/150‑1 (MQ=255) cAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACt < 2:1911386/150‑1 (MQ=255) cAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACt < 1:1167145/150‑1 (MQ=255) cAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACt < 1:1265513/150‑1 (MQ=255) gTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTgg < 2:4320039/150‑1 (MQ=255) gTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTgg > 2:3551426/1‑150 (MQ=255) tAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc > 2:159040/1‑150 (MQ=255) aGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCa > 1:2834859/1‑150 (MQ=255) gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAg < 2:2345927/150‑1 (MQ=255) gAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGt > 1:1162283/1‑150 (MQ=255) aaCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGtt < 2:315130/150‑1 (MQ=255) aaCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGtt < 1:2375422/150‑1 (MQ=255) aaCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGtt > 1:4585239/1‑150 (MQ=255) aaCGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGtt < 1:3558972/150‑1 (MQ=255) aCGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTa < 2:1029725/150‑1 (MQ=255) | CAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA > CP009273/3889430‑3889727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |