Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,902,909 | C→A | 11.7% | V284F (GTT→TTT) | pstC ← | phosphate transporter subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,902,909 | 0 | C | A | 11.7% | 852.9 / 58.3 | 238 | V284F (GTT→TTT) | pstC | phosphate transporter subunit |
Reads supporting (aligned to +/- strand): ref base C (111/99); new base A (15/13); total (126/112) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 241 total aligned reads displayed.
CAGCCAGCGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAG > CP009273/3902760‑3903056 | cagccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAc < 2:2919311/150‑1 (MQ=255) agccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACg > 2:292111/1‑150 (MQ=255) cagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGGTGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGc > 2:1020857/1‑150 (MQ=255) cagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGc > 1:3093249/1‑150 (MQ=255) cagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGc > 1:3954874/1‑150 (MQ=255) cagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGc > 1:4545725/1‑150 (MQ=255) cgccgcAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGa > 1:1758283/1‑150 (MQ=255) aGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCGACGTGCAGACCGGAt < 2:3194796/150‑1 (MQ=255) aGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAt > 2:1742222/1‑150 (MQ=255) gTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccg > 1:1630270/1‑150 (MQ=255) aTTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccgcttccg < 1:4261592/150‑1 (MQ=255) aTTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGAttccgcttccg > 1:3990214/1‑150 (MQ=255) ttCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCa > 1:4175616/1‑150 (MQ=255) tCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCaa > 1:338043/1‑150 (MQ=255) ccATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttc > 2:1299003/1‑150 (MQ=255) cATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcg > 1:2056871/1‑150 (MQ=255) cATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcg > 1:2056980/1‑150 (MQ=255) cATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAAttcg < 1:3101640/150‑1 (MQ=255) aTAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgt > 1:4569847/1‑150 (MQ=255) aTAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgt > 2:854435/1‑150 (MQ=255) aGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAAttcgttc < 2:638394/150‑1 (MQ=255) gCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgttcg < 2:3790056/150‑1 (MQ=255) gCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgttcg < 2:3790243/150‑1 (MQ=255) gCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgttcg > 1:2306003/1‑150 (MQ=255) ccATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGc < 2:2576862/150‑1 (MQ=255) ccATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGc > 1:1299764/1‑150 (MQ=255) cATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGcc < 2:2187260/150‑1 (MQ=255) aGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAgcg > 1:19091/1‑150 (MQ=255) gCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAgcgc > 1:945045/1‑150 (MQ=255) cGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCa > 2:1465239/1‑150 (MQ=255) gCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCagag > 1:3223285/1‑150 (MQ=255) cccccTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAgg < 1:1940723/150‑1 (MQ=255) ccccTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGt > 1:1405914/1‑150 (MQ=255) aTTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACt > 1:184275/1‑150 (MQ=255) aTTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACt < 1:141613/150‑1 (MQ=255) ttCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTg < 2:1666440/150‑1 (MQ=255) tCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGt < 1:978420/150‑1 (MQ=255) ttAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTg > 2:749602/1‑150 (MQ=255) tAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc > 1:3131570/1‑150 (MQ=255) tAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc > 1:4026122/1‑150 (MQ=255) aGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGcc > 2:2354542/1‑150 (MQ=255) aGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGcc > 2:4496646/1‑150 (MQ=255) ccAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACACACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCg < 2:1934117/150‑1 (MQ=255) ccAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCg > 1:4296830/1‑150 (MQ=255) cAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCgg > 1:2731900/1‑150 (MQ=255) aGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGc > 1:101144/1‑150 (MQ=255) ggCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCa < 1:4246930/150‑1 (MQ=255) ggCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCa < 2:2460089/150‑1 (MQ=255) cATAATCATATACTTCGATGCGGCGAGGACGATGATGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCTGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCAtata < 2:3041271/150‑1 (MQ=255) aTAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATAc > 2:2412812/1‑150 (MQ=255) tAATCATATACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGACCAGTTACATCAGTGCGGCAACGTGCAGACCGGATTCGGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGTCATATACa < 2:4339224/150‑1 (MQ=255) tAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACa > 2:2961871/1‑150 (MQ=255) tAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACa < 2:1730597/150‑1 (MQ=255) aaTCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAg < 2:2273422/150‑1 (MQ=255) aTAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAg > 2:2063559/1‑150 (MQ=255) aTAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAg < 2:1857769/150‑1 (MQ=255) aaaCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGgc < 1:2528319/150‑1 (MQ=255) aCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGgcgc > 2:2814278/1‑150 (MQ=255) cTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACCGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCt > 2:3568513/1‑150 (MQ=255) cGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTc > 1:3018797/1‑150 (MQ=255) cGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTc < 2:3908655/150‑1 (MQ=255) cGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTc < 2:2153130/150‑1 (MQ=255) cGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTc < 2:468417/150‑1 (MQ=255) gATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCg < 1:668312/150‑1 (MQ=255) gAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTa < 2:700227/150‑1 (MQ=255) gAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTa > 1:4360842/1‑150 (MQ=255) gACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGAGAGGCGCTGTCGAGCTGGTAGgt > 1:3256273/1‑150 (MQ=255) cGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGgtgt > 2:3002087/1‑150 (MQ=255) aTGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGAAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTa > 2:1547114/1‑150 (MQ=255) tGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTAc > 1:1096552/1‑150 (MQ=255) tGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTAc < 2:16038/150‑1 (MQ=255) tGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTAc > 1:535451/1‑150 (MQ=255) gAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTAcc < 1:1782356/150‑1 (MQ=255) aaGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCg > 1:1720134/1‑150 (MQ=255) gTAATCACAAACAGTATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgatg > 1:2396624/1‑150 (MQ=255) aaTCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgatgat < 2:2394056/150‑1 (MQ=255) aaTCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgatgat < 2:1627543/150‑1 (MQ=255) aaTCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgatgat > 2:1164104/1‑150 (MQ=255) aaTCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgatgat > 1:1525327/1‑150 (MQ=255) aaaCAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGt < 1:785341/150‑1 (MQ=255) aaaCAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGt < 1:785310/150‑1 (MQ=255) ggATCACGCACAGTAACATCAGTGCGGCACCGTTCAGACCTGAATCCGCTTCCTCAAATTCGTTCGCCAGCGCAGAGGTGATACTGAATCCAGGCATATACAGCGAGGCGCTCTCGAGCTGTTAGGTGATACCGATGATAAAGCTCAcag > 2:4008245/1‑148 (MQ=255) gATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGc > 2:2765072/1‑150 (MQ=255) gATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGc > 2:1328442/1‑150 (MQ=255) gATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGc > 2:1108298/1‑150 (MQ=255) tCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 2:640613/150‑1 (MQ=255) cAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCAt > 2:970097/1‑150 (MQ=255) cAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCAt > 1:683246/1‑150 (MQ=255) aGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATg > 2:312792/1‑150 (MQ=255) aGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATg > 2:1561191/1‑150 (MQ=255) ggCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATgg > 1:3510718/1‑150 (MQ=255) gCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGt < 1:3189181/150‑1 (MQ=255) ccAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTAGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGttt < 2:3043290/150‑1 (MQ=255) aGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCa > 1:2823771/1‑150 (MQ=255) ttCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCAcc > 1:2447119/1‑150 (MQ=255) ccATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGa < 1:1233647/150‑1 (MQ=255) aTCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgc < 2:3954960/150‑1 (MQ=255) tCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcg < 1:1777308/150‑1 (MQ=255) tGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGcgcgcg < 1:2891299/150‑1 (MQ=255) tGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGcgcgcg < 1:4419253/150‑1 (MQ=255) | CAGCCAGCGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAG > CP009273/3902760‑3903056 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |