| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,918,039 | C→A | 9.3% | D319Y (GAT→TAT) | mnmG ← | 5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,918,039 | 0 | C | A | 9.3% | 997.4 / 49.3 | 267 | D319Y (GAT→TAT) | mnmG | 5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| Reads supporting (aligned to +/- strand): ref base C (123/119); new base A (8/17); total (131/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.28e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.40e-01 | |||||||||||
Only 100 of 270 total aligned reads displayed.
AGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGACACCTTCG > CP009273/3917890‑3918187 | cAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGa < 1:536547/150‑1 (MQ=255) aaGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAAc < 1:4183521/150‑1 (MQ=255) aaGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAAc < 1:2841475/150‑1 (MQ=255) aaGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCGTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAAc > 1:521577/1‑150 (MQ=255) aGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACg > 2:2782105/1‑150 (MQ=255) gAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACgg < 1:2480052/150‑1 (MQ=255) gAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGGTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACgg > 2:183334/1‑150 (MQ=255) aCAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCa < 1:4142350/150‑1 (MQ=255) aCAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCa < 1:2136533/150‑1 (MQ=255) aCAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCa > 2:4623414/1‑150 (MQ=255) cAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGAACGGCAg > 2:2569669/1‑150 (MQ=255) aGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAgg > 2:4500591/1‑150 (MQ=255) ccccTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCt < 2:3703479/150‑1 (MQ=255) ccccTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCt > 2:3310152/1‑150 (MQ=255) cccTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCtg < 2:2168669/150‑1 (MQ=255) cTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGAACGGCAGGCtggt > 2:697452/1‑150 (MQ=255) tGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCtggtg < 1:2261040/150‑1 (MQ=255) ggATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCtggtgg > 1:3406808/1‑150 (MQ=255) tAAACTTGCTCTCCAGCGTCGGGTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCGTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGgaga > 1:210755/1‑150 (MQ=255) aCTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATAc > 1:1582325/1‑150 (MQ=255) aCTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATAc > 1:1246997/1‑150 (MQ=255) ctctCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTc < 1:2342547/150‑1 (MQ=255) ctcCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCgg < 2:1894961/150‑1 (MQ=255) tcCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGCTTTGCATCTGCACATCGAACGGCAGGCTGGGGGAGATACCGTTCGGa > 1:2036882/1‑150 (MQ=255) tcCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGa > 2:3442158/1‑150 (MQ=255) cAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATa < 1:3779646/150‑1 (MQ=255) cAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATa < 1:3779532/150‑1 (MQ=255) gTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAAtt > 2:3369331/1‑150 (MQ=255) ggTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCa < 1:2157897/150‑1 (MQ=255) gTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCAt > 1:1184015/1‑150 (MQ=255) gTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCAt > 1:3850471/1‑150 (MQ=255) tttCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCAtt > 1:918673/1‑150 (MQ=255) tttCAGGTCGAGAGGATCGAAGAAGTCATACTCAATGTAATAACCCGGACTCACGATATTCGCGTTTTCCATCCCCTTCATAGAGAGGACGATTTGCATCTGCACTTCGAACGGAAGGCTGGTGGTGATACCGTTCGGATAAATTTCAtt < 2:1431814/150‑1 (MQ=255) tCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTag < 2:2074571/150‑1 (MQ=255) cAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTaga > 1:2907433/1‑150 (MQ=255) ggTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAgg > 2:2304388/1‑150 (MQ=255) tCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTc < 1:57437/150‑1 (MQ=255) tCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTc < 2:1029791/150‑1 (MQ=255) cgAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGt > 1:1781412/1‑150 (MQ=255) ggATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCt < 2:2498730/150‑1 (MQ=255) tCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTcc > 1:801083/1‑150 (MQ=255) tCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTcc < 2:1761324/150‑1 (MQ=255) gaagaaGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCgg > 2:1235180/1‑150 (MQ=255) gaagaaGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCgg < 1:3075406/150‑1 (MQ=255) gaagaaGTCATACTCAATGGCATAACCCGGACACACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCgg < 2:3176810/150‑1 (MQ=255) aagaagTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGt > 1:4509279/1‑150 (MQ=255) agTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCaa > 2:3573745/1‑150 (MQ=255) tCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAgg < 1:3002357/150‑1 (MQ=255) cATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGa > 1:1453714/1‑150 (MQ=255) cATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGa < 2:3563288/150‑1 (MQ=255) tACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAg < 1:1809/150‑1 (MQ=255) tCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATc > 1:3214089/1‑150 (MQ=255) tGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGAt > 2:1119577/1‑150 (MQ=255) aTAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCTGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTg < 1:3458522/150‑1 (MQ=255) aTAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTg < 2:862723/150‑1 (MQ=255) aTAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTg > 1:1356667/1‑150 (MQ=255) aaCCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGAt < 1:2058275/150‑1 (MQ=255) cGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCt > 1:1029890/1‑150 (MQ=255) gATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGaa > 2:151564/1‑150 (MQ=255) gATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGaa > 1:192864/1‑150 (MQ=255) aTCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAg < 2:1327393/150‑1 (MQ=255) aTCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAg < 1:2656851/150‑1 (MQ=255) aTCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAg < 2:3650657/150‑1 (MQ=255) aTCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAg > 2:545811/1‑150 (MQ=255) cgTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGa > 1:3256089/1‑150 (MQ=255) tCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTg > 1:3311606/1‑150 (MQ=255) tCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCCAAGCGCATGACTTTg < 2:4250371/150‑1 (MQ=255) tCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCtt < 2:606698/150‑1 (MQ=255) tCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCtt < 2:2926090/150‑1 (MQ=255) cccTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTtcg < 2:3758730/150‑1 (MQ=255) ccTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTtcga > 1:3565665/1‑150 (MQ=255) cTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTtcgat > 2:1193461/1‑150 (MQ=255) gCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTtcgatcg < 1:4500590/150‑1 (MQ=255) cATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTtcgatcga > 2:3887618/1‑150 (MQ=255) cATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTtcgatcga > 2:2987590/1‑150 (MQ=255) tAGAGCGGACGATTTGCATCTGCACATAGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACg < 1:3974983/150‑1 (MQ=255) agagCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACgg < 2:521577/150‑1 (MQ=255) gagCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACggg > 2:2955337/1‑150 (MQ=255) gagCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACggg < 1:1054356/150‑1 (MQ=255) agCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGc < 1:4370770/150‑1 (MQ=255) agCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGc > 1:1678087/1‑150 (MQ=255) agCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGc > 1:1315821/1‑150 (MQ=255) gCGGACTATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCa < 2:1245969/150‑1 (MQ=255) gACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTa < 2:1797404/150‑1 (MQ=255) gACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTa > 1:1864080/1‑150 (MQ=255) tttGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTg < 2:4310831/150‑1 (MQ=255) ttGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTgg > 1:767574/1‑150 (MQ=255) ttGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTgg < 1:738465/150‑1 (MQ=255) ttGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTgg > 1:2783523/1‑150 (MQ=255) tGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTggg < 2:4553958/150‑1 (MQ=255) gCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGc > 1:2654040/1‑150 (MQ=255) gCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGc > 2:754572/1‑150 (MQ=255) aTCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCg > 1:725528/1‑150 (MQ=255) gCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGacac < 2:3622762/150‑1 (MQ=255) gCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGacac > 1:795754/1‑150 (MQ=255) gCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGacac < 1:1085884/150‑1 (MQ=255) acaTCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGACACCt < 2:3958194/150‑1 (MQ=255) aTCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGACACCTTc < 2:1996496/150‑1 (MQ=255) aTCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGACACCTTc < 2:914768/150‑1 (MQ=255) tCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGACACCTTCg > 1:2414811/1‑150 (MQ=255) | AGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGACGGGCAGTAGCGTGGGCCGACACCTTCG > CP009273/3917890‑3918187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |