| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,011,961 | G→T | 15.2% | A423A (GCG→GCT) | rmuC → | DNA recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,011,961 | 0 | G | T | 15.2% | 948.9 / 94.0 | 286 | A423A (GCG→GCT) | rmuC | DNA recombination protein |
| Reads supporting (aligned to +/- strand): ref base G (130/112); new base T (22/22); total (152/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
CGTGCCAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCA > CP009273/4011812‑4012110 | tGCCAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGtt < 2:3912219/150‑1 (MQ=255) gCCAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGttt > 1:36472/1‑150 (MQ=255) gCCAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGttt < 1:4361317/150‑1 (MQ=255) ccAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTc < 1:1140043/150‑1 (MQ=255) ccAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTc < 1:93552/150‑1 (MQ=255) aGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTcgc < 2:1144796/150‑1 (MQ=255) cAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCgg < 2:4295406/150‑1 (MQ=255) aaGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGt > 2:2937499/1‑150 (MQ=255) gCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGttt < 2:565504/150‑1 (MQ=255) tGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAg < 2:768831/150‑1 (MQ=255) tACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGa < 2:1667183/150‑1 (MQ=255) aCGACAAGATGCGTTTGTTCATCGATGACATTTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCTCGGTTTAGGAg > 1:3437823/1‑150 (MQ=255) cGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCCAAGTCTCGACAAAGCGCAGGATAATTATCGGTAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGt > 2:1530930/1‑150 (MQ=255) cGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGTAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGt > 2:3827287/1‑150 (MQ=255) cAAGATGCGTTTGTTCATCGATGACATGTCCTCGATTGGTCAAAGTCTCTACAAATCGCAGTATAATTATCGGCAGGCAATGAAAAAACTCTAGTCAGTGCGCGGAAATGTGATGGAGCAGGCAGAAGCGTATCGCGGGTTAGGAGTAGa > 2:487610/1‑150 (MQ=255) cAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGa > 1:2602329/1‑150 (MQ=255) cAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGa > 2:2758736/1‑150 (MQ=255) aGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGaaa < 1:3998767/150‑1 (MQ=255) tGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTa < 2:1127229/150‑1 (MQ=255) tGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTa < 2:4392820/150‑1 (MQ=255) gCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTaa > 1:1459952/1‑150 (MQ=255) cGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTaaa > 1:3281540/1‑150 (MQ=255) gTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCTACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAATATCACTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAAc > 1:3165546/1‑150 (MQ=255) ttGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAAcgc > 2:1735101/1‑150 (MQ=255) ttGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAAcgc < 2:4474629/150‑1 (MQ=255) gTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCga < 1:1697965/150‑1 (MQ=255) tCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCgaga < 1:1108598/150‑1 (MQ=255) cATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCCGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGAt > 1:3729685/1‑150 (MQ=255) aTCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGAtt > 2:3416772/1‑150 (MQ=255) gATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAAt > 1:3044054/1‑150 (MQ=255) gATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAAt < 1:788209/150‑1 (MQ=255) gACATGTTCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCg > 2:322348/1‑150 (MQ=255) gACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCg > 2:2639726/1‑150 (MQ=255) aCATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCgg < 1:3596828/150‑1 (MQ=255) cATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGa > 1:2539000/1‑150 (MQ=255) tGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGAtt > 2:2614195/1‑150 (MQ=255) tGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGAtt > 2:239628/1‑150 (MQ=255) gTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGAttt < 2:1430704/150‑1 (MQ=255) cgcgATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGc > 2:2807811/1‑150 (MQ=255) cgcgATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGc > 2:3233860/1‑150 (MQ=255) cgATTTGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTg < 1:4174192/150‑1 (MQ=255) gATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGa > 1:1635964/1‑150 (MQ=255) gATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGa < 2:1646085/150‑1 (MQ=255) ttGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAAc < 2:3198388/150‑1 (MQ=255) tGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACa < 2:2494558/150‑1 (MQ=255) ggTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAg < 1:3837768/150‑1 (MQ=255) ggTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAg < 1:910873/150‑1 (MQ=255) cAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCg < 1:758678/150‑1 (MQ=255) aaGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGt < 2:1955355/150‑1 (MQ=255) gTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGa > 1:1877016/1‑150 (MQ=255) tctcGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAg < 2:1551071/150‑1 (MQ=255) cGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCa < 2:3348463/150‑1 (MQ=255) cGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCa > 1:3467/1‑150 (MQ=255) gACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTTCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAg < 1:155142/150‑1 (MQ=255) aaaGCGCAGGATAATTATCGGCAGGCAATGAAAAATCTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGAt > 2:2195047/1‑150 (MQ=255) aaaGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGAt > 2:3252768/1‑150 (MQ=255) aaaGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGAt > 1:3916712/1‑150 (MQ=255) aaaGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGAt > 1:4436534/1‑150 (MQ=255) aaGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATg < 2:734307/150‑1 (MQ=255) aGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGa < 1:2065037/150‑1 (MQ=255) aGGATAATTATCGGCAGGCAATGAAAAAGCTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGt > 1:2880893/1‑150 (MQ=255) aaTTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGa < 2:3504216/150‑1 (MQ=255) aTTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGAc > 1:3993263/1‑150 (MQ=255) aTTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGAc < 1:1900847/150‑1 (MQ=255) aTCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTtc > 1:85170/1‑150 (MQ=255) tCGGCCGGCAATGAAAAAACTCTCTTCCGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTtcg < 1:1309609/150‑1 (MQ=255) cGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTtcgg > 1:1538655/1‑150 (MQ=255) gcaggcaATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTtcggtc < 2:1286673/150‑1 (MQ=255) caggcaATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTtcggtcg > 1:4606909/1‑150 (MQ=255) caggcaATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTtcggtcg < 1:4399775/150‑1 (MQ=255) aaTGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTcc > 2:3177206/1‑150 (MQ=255) aaTGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTATCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTcc > 1:115672/1‑150 (MQ=255) gAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGa > 2:2342108/1‑150 (MQ=255) gAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGa > 2:3081883/1‑150 (MQ=255) aaaaaCTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGagc < 2:3526956/150‑1 (MQ=255) aaCTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGagcagc > 1:1269085/1‑150 (MQ=255) ctctctTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCg < 2:185289/150‑1 (MQ=255) tctTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAat < 2:917622/150‑1 (MQ=255) tctTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAat > 2:2854755/1‑150 (MQ=255) tctTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAat > 1:711965/1‑150 (MQ=255) taaGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAatgat > 1:1026750/3‑150 (MQ=255) cAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAatgatg > 2:4430952/1‑150 (MQ=255) gggCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGaa > 2:136271/1‑150 (MQ=255) ggCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAg > 2:2153774/1‑150 (MQ=255) ggCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAg < 1:2410342/150‑1 (MQ=255) gcgGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCtt < 1:2258790/150‑1 (MQ=255) cgGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTa > 2:4234056/1‑150 (MQ=255) ggAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTAt < 2:2056064/150‑1 (MQ=255) gAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATc > 1:300215/1‑150 (MQ=255) aaaTGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCa > 1:3367432/1‑150 (MQ=255) tgCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAAcgcg > 1:3575798/1‑150 (MQ=255) tgCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAAcgcg > 2:684643/1‑150 (MQ=255) tGGCGCAGGCAGAAGCTTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCgatg < 2:4095059/150‑1 (MQ=255) tGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCgatg > 2:1030575/1‑150 (MQ=255) ggCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCgatga < 1:2104621/150‑1 (MQ=255) aggcagAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAat > 1:2766351/1‑150 (MQ=255) aggcagAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTAAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAat > 1:59771/1‑150 (MQ=255) gcagAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAatat < 1:3220705/150‑1 (MQ=255) cagAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAAtata > 2:652798/1‑150 (MQ=255) cGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATcagc > 1:2287244/1‑150 (MQ=255) | CGTGCCAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCA > CP009273/4011812‑4012110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |