| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,035,421 | G→T | 92.4% | intergenic (‑62/‑8) | mobA ← / → yihD | molybdopterin‑guanine dinucleotide synthase/DUF1040 protein YihD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,035,421 | 0 | G | T | 92.4% | 779.2 / 53.8 | 263 | intergenic (‑62/‑8) | mobA/yihD | molybdopterin‑guanine dinucleotide synthase/DUF1040 protein YihD |
| Reads supporting (aligned to +/- strand): ref base G (12/8); new base T (137/106); total (149/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 268 total aligned reads displayed.
ATTCAAGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACGG > CP009273/4035272‑4035567 | aaGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGatcatc > 1:476866/1‑150 (MQ=255) aaGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGatcatc > 2:1084407/1‑150 (MQ=255) aaTCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTa > 1:3774747/1‑150 (MQ=255) aaTCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTa > 2:510154/1‑150 (MQ=255) aTCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTAt > 1:454468/1‑150 (MQ=255) aTCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTAt < 1:684847/150‑1 (MQ=255) cTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTaa < 1:3719235/150‑1 (MQ=255) cTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTGTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTaa > 2:3343903/1‑150 (MQ=255) tACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTaaa > 1:1520930/1‑150 (MQ=255) tACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTATGTCTCAAGAGTAAGGATCATCACTATGAAATGTaaa > 1:3883592/1‑150 (MQ=255) cgccgcCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACg < 2:3191494/150‑1 (MQ=255) ccgccCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTc < 1:911554/150‑1 (MQ=255) cATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCtgaat > 1:4154263/1‑150 (MQ=255) gTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGt > 1:3249853/1‑150 (MQ=255) tCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGtt > 2:2524428/1‑150 (MQ=255) ggCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTAtt < 2:720389/150‑1 (MQ=255) cTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGa < 1:3442533/150‑1 (MQ=255) cTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGa > 2:1777633/1‑150 (MQ=255) tttACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGaa < 2:4640478/150‑1 (MQ=255) ttACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAAc < 2:1414316/150‑1 (MQ=255) tACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAAct > 1:2744764/1‑150 (MQ=255) cGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAActcct < 1:577533/150‑1 (MQ=255) gCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAActcctc < 1:2489719/150‑1 (MQ=255) cTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTcca < 2:2355077/150‑1 (MQ=255) cTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTcca > 2:1306984/1‑150 (MQ=255) tGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTccag < 2:4115665/150‑1 (MQ=255) cacaACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCagccagcc < 1:2879664/150‑1 (MQ=255) cacaACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCagccagcc < 1:2337973/150‑1 (MQ=255) acaACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCt < 1:265237/150‑1 (MQ=255) acaACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCt < 2:1596751/150‑1 (MQ=255) aaCGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTgg > 2:331227/1‑150 (MQ=255) cGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCa > 1:4409422/1‑150 (MQ=255) cGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCa > 1:1012346/1‑150 (MQ=255) gCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCaa < 1:2709958/150‑1 (MQ=255) gCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCaa > 2:2592571/1‑150 (MQ=255) ccTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCaaa > 2:3991774/1‑150 (MQ=255) cTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCaaaa > 2:3152794/1‑150 (MQ=255) tGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCaaaaa > 1:2089942/1‑150 (MQ=255) ttATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAaga > 1:1082513/1‑150 (MQ=255) tATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAagag > 1:3841552/1‑150 (MQ=255) aTCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGc > 2:2909112/1‑150 (MQ=255) tcgtcgTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGcc > 2:2067773/1‑150 (MQ=255) cgtcgtCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCa > 1:1678505/1‑150 (MQ=255) gtcgtcATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAg > 2:627991/1‑150 (MQ=255) gtcATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGAcc < 2:2627417/150‑1 (MQ=255) gtcATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGAcc < 2:309827/150‑1 (MQ=255) gtcATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGAcc < 2:2254495/150‑1 (MQ=255) catcaGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCtt > 2:4186007/1‑150 (MQ=255) aGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAAcc < 2:4374824/150‑1 (MQ=255) gATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACct > 1:2467295/1‑150 (MQ=255) ttCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACctgc < 1:1739406/150‑1 (MQ=255) tCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACctgct > 2:673347/1‑150 (MQ=255) ccGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCa < 1:3453996/150‑1 (MQ=255) cGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCaa > 1:1272190/1‑150 (MQ=255) cGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCaa > 2:2993737/1‑150 (MQ=255) cGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCaa > 1:1271914/1‑150 (MQ=255) cGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCaa < 2:4442604/150‑1 (MQ=255) gATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAt > 2:1670615/1‑150 (MQ=255) tatCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAttt < 2:3625050/150‑1 (MQ=255) tCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAttttt < 1:4296271/150‑1 (MQ=255) cgcgTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAATTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTg > 1:2405642/1‑150 (MQ=255) cGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTg > 2:3480091/1‑150 (MQ=255) ccTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCa < 1:1722869/150‑1 (MQ=255) ccTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCa < 1:1722945/150‑1 (MQ=255) ccTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCa > 1:1002286/1‑150 (MQ=255) ctctTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAg > 1:1215834/1‑150 (MQ=255) ctctTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAg > 2:1831990/1‑150 (MQ=255) ctctTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCATCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAg > 2:2916745/1‑150 (MQ=255) ctctTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAg > 2:3508139/1‑150 (MQ=255) ttATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACt < 2:1648551/150‑1 (MQ=255) tATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTg > 1:1929771/1‑150 (MQ=255) aTTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTgg < 1:2427956/150‑1 (MQ=255) tgtgGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCg > 1:2952060/1‑150 (MQ=255) ggcttGACCCTGCTAACTTGTCTGTCTCAATAGTAAGGATCATAAATATGATATTTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTTGCTAAAAGAGCCAGACCTTAACCTTCTGAAATTTTTGCAGAAACTGGCGATag < 2:4336525/147‑1 (MQ=255) ttGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGTCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGt > 2:427366/1‑150 (MQ=255) ttGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGt > 2:2131931/1‑150 (MQ=255) gACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCa > 1:2158552/1‑150 (MQ=255) gACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCa > 2:2475545/1‑150 (MQ=255) aCCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAg > 2:1919620/1‑150 (MQ=255) aCCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAg < 1:769894/150‑1 (MQ=255) tGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGttt < 1:357193/150‑1 (MQ=255) tGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGttt < 2:454468/150‑1 (MQ=255) gCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGtttt < 2:4039954/150‑1 (MQ=255) gCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGtttt < 2:2226261/150‑1 (MQ=255) cTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTg < 2:3124258/150‑1 (MQ=255) cTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTg < 2:2614347/150‑1 (MQ=255) tAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGa > 1:4159917/1‑150 (MQ=255) tAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGa > 2:2307297/1‑150 (MQ=255) gtctgtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGa > 1:2919022/1‑150 (MQ=255) tctgtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGaa < 2:1115122/150‑1 (MQ=255) gtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTg < 2:3883592/150‑1 (MQ=255) gtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTg < 2:1520930/150‑1 (MQ=255) ctcAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGc < 1:3148798/150‑1 (MQ=255) aaGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGa > 1:4043686/1‑150 (MQ=255) agagTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGAt > 2:2709098/1‑150 (MQ=255) gagTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAATTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGAtt > 1:957144/1‑150 (MQ=255) agTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGAttt < 2:3774747/150‑1 (MQ=255) aGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACg > 1:3707639/1‑150 (MQ=255) ggATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACgg < 1:2050077/150‑1 (MQ=255) ggATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACgg < 2:919042/150‑1 (MQ=255) | ATTCAAGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACGG > CP009273/4035272‑4035567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |