| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,092,998 | G→T | 39.9% | A83A (GCG→GCT) | yiiM → | 6‑N‑hydroxylaminopurine resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,092,998 | 0 | G | T | 39.9% | 371.5 / 295.5 | 275 | A83A (GCG→GCT) | yiiM | 6‑N‑hydroxylaminopurine resistance protein |
| Reads supporting (aligned to +/- strand): ref base G (74/91); new base T (56/54); total (130/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 277 total aligned reads displayed.
GACGGAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCGATATA > CP009273/4092851‑4093145 | aCGGAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCtttt < 2:336138/150‑1 (MQ=255) aCGGAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGttt > 2:795514/1‑150 (MQ=255) cGGAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGTGCGCGGGAATTTCCTGAACAGGCTGAGATGTTTGTTGCGCCTGCGTTTg > 2:1289207/1‑150 (MQ=255) ggAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTgg > 2:2710361/1‑150 (MQ=255) ggAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTgg > 1:3318642/1‑150 (MQ=255) ggAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTgg > 2:3793820/1‑150 (MQ=255) gAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGt > 1:3399457/1‑150 (MQ=255) cTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGaa < 2:704618/150‑1 (MQ=255) cTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGaa > 1:2774822/1‑150 (MQ=255) cTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGaa > 2:1734923/1‑150 (MQ=255) tGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGaaa > 2:3047295/1‑150 (MQ=255) tGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGaaa > 1:3092139/1‑150 (MQ=255) cTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACctc < 1:2812241/150‑1 (MQ=255) ggAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCtctc > 2:738024/1‑150 (MQ=255) gAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCa < 1:2623998/150‑1 (MQ=255) aaGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCaa < 2:3282206/150‑1 (MQ=255) ggTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAAcc < 1:3082241/150‑1 (MQ=255) gACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGAc > 1:3521412/1‑150 (MQ=255) aCGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCATCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCACTCAACCGACg > 1:1992925/1‑150 (MQ=255) cGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACgg > 2:2558040/1‑150 (MQ=255) cGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACgg > 2:1073006/1‑150 (MQ=255) gAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGc > 1:4533103/1‑150 (MQ=255) aGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGcc < 1:2415140/150‑1 (MQ=255) aGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGcc > 1:207228/1‑150 (MQ=255) gCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCt > 1:2959780/1‑150 (MQ=255) cAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTg > 1:947536/1‑150 (MQ=255) aGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGa > 1:4385195/1‑150 (MQ=255) aGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGa < 2:3959755/150‑1 (MQ=255) cGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACgg > 2:421664/1‑150 (MQ=255) ggAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGa < 1:2640528/150‑1 (MQ=255) ggAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGa < 1:3282839/150‑1 (MQ=255) agaAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGaaa > 1:1277273/1‑150 (MQ=255) gTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGtt < 1:1704725/150‑1 (MQ=255) tCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑ta < 1:132631/150‑1 (MQ=255) tCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑ta < 1:133600/150‑1 (MQ=255) tCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑ta < 1:1500412/150‑1 (MQ=255) tCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑ta < 1:3688964/150‑1 (MQ=255) tCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑ta < 1:581170/150‑1 (MQ=255) aCGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑tata < 2:1393031/150‑1 (MQ=255) ggcggGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATg < 1:1201329/150‑1 (MQ=255) ggcggGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATg > 1:636953/1‑150 (MQ=255) gcggGCCAGTCAGTGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATgg < 1:1858421/150‑1 (MQ=255) gggCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGc > 2:1512806/1‑150 (MQ=255) gggCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGc > 2:1221260/1‑150 (MQ=255) ggCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCg > 2:2886592/1‑150 (MQ=255) ccAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGat > 1:3352502/1‑150 (MQ=255) agacagaGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGatat < 1:1064043/150‑1 (MQ=255) cagaGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATAtttt > 1:2700307/1‑150 (MQ=255) agagCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTc > 2:2786243/1‑150 (MQ=255) agCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCg < 1:2833523/150‑1 (MQ=255) cgcTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCt > 2:3657047/1‑150 (MQ=255) tgtgTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTggg < 2:4050602/150‑1 (MQ=255) gtgtCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTgggg < 1:836349/150‑1 (MQ=255) gtCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGgag > 1:1452285/1‑150 (MQ=255) aTTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAgg > 2:3059386/1‑150 (MQ=255) aTTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAgg < 2:1857356/150‑1 (MQ=255) ttATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGc > 1:717412/1‑150 (MQ=255) ttATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCGGGGGAGAGGc > 1:4121824/1‑150 (MQ=255) tATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGGTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCa > 2:918722/1‑150 (MQ=255) ccTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTa > 2:3694001/1‑150 (MQ=255) gTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTc > 2:4555967/1‑150 (MQ=255) gTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTc > 1:4022149/1‑150 (MQ=255) tGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCa < 1:3950260/150‑1 (MQ=255) aGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAgg < 2:4076172/150‑1 (MQ=255) aGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAgg < 1:2926092/150‑1 (MQ=255) aTTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTca < 1:4214999/150‑1 (MQ=255) aTTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTca > 1:214724/1‑150 (MQ=255) aTTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTca < 1:1658852/150‑1 (MQ=255) aTCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTcagcc < 1:3468878/150‑1 (MQ=255) tctcTACTGGGCGCGGGAATGTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTcagcca < 2:3230514/150‑1 (MQ=255) ctctACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTcagccag < 1:3584127/150‑1 (MQ=255) ctACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCagccagcc > 1:2977696/1‑150 (MQ=255) tGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCgcgc > 2:3457194/1‑150 (MQ=255) tGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCgcgc > 2:1879655/1‑150 (MQ=255) ggCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTc < 2:1801028/150‑1 (MQ=255) gcgGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGcc > 1:937005/1‑150 (MQ=255) gggAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCtt > 1:380127/1‑150 (MQ=255) gggAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCtt > 2:3719656/1‑150 (MQ=255) ggAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTg < 1:795514/150‑1 (MQ=255) ggAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTg < 2:207111/150‑1 (MQ=255) aaTTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCt < 2:3406887/150‑1 (MQ=255) tttCCGGCACAGGCGGCGTTGTTTGTTGCGCCTGCGTTTTGTGAAAACCTCACAACCGACGGCCTGCCGGAAAGTAATGTTATATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCta < 2:3356547/150‑1 (MQ=255) ttCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCtata < 1:2642047/150‑1 (MQ=255) ttCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCtata < 1:4424666/150‑1 (MQ=255) tCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATaa < 2:1241912/150‑1 (MQ=255) tCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATaa < 2:522720/150‑1 (MQ=255) cGGAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAAACGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAAc < 1:3669365/150‑1 (MQ=255) gAACAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTc > 1:107755/1‑150 (MQ=255) aaCAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCa > 1:4024632/1‑150 (MQ=255) aCAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCaa > 2:125071/1‑150 (MQ=255) cAGGCGGAGTTGTTTGTTGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCCATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAAt > 2:908575/1‑150 (MQ=255) gCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTAc < 2:1374495/150‑1 (MQ=255) ggAGTTGTTTGTTGCGCCTGCTTTTGGTTAAAACCTCTAAACCGACGGCCTGACGGAAAGTAATTTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCa > 2:2737620/1‑150 (MQ=255) ggAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCa < 1:4451712/150‑1 (MQ=255) gttgttTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCTGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACAAttt > 2:2504586/1‑150 (MQ=255) tgtttgttGCGCCTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTg < 2:4155380/150‑1 (MQ=255) cgcCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCg > 2:4346042/1‑150 (MQ=255) ccTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCGat < 1:1777615/150‑1 (MQ=255) ccTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCGat < 2:2959780/150‑1 (MQ=255) cTGCTTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCGata > 2:4264093/1‑150 (MQ=255) | GACGGAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTT‑TATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCGATATA > CP009273/4092851‑4093145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |