| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,122,781 | C→A | 16.5% | R80S (CGC→AGC) | metF → | 5,10‑methylenetetrahydrofolate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,122,781 | 0 | C | A | 16.5% | 881.5 / 105.1 | 276 | R80S (CGC→AGC) | metF | 5,10‑methylenetetrahydrofolate reductase |
| Reads supporting (aligned to +/- strand): ref base C (111/119); new base A (34/12); total (145/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.90e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 284 total aligned reads displayed.
TCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCAGAA > CP009273/4122632‑4122930 | cccGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCg > 2:2385433/1‑150 (MQ=255) cgccgcGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCa < 1:3834666/150‑1 (MQ=255) gccgcGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCAc < 1:538735/150‑1 (MQ=255) gcgTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTgg < 1:1657525/150‑1 (MQ=255) cgTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGt < 2:2877913/150‑1 (MQ=255) cgTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGt > 2:710942/1‑150 (MQ=255) gTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTc > 1:1291612/1‑150 (MQ=255) tACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCt > 1:2015374/1‑150 (MQ=255) aCCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTg < 1:3286194/150‑1 (MQ=255) cctgTGAAATGGAGCAGACACTGTGGATCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTgg < 2:1709906/147‑1 (MQ=255) cAGTGAAATGGAGCAGACCCTGTGGACCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGa > 2:323391/1‑150 (MQ=255) cAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGa < 1:3961432/150‑1 (MQ=255) cAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGa < 1:745358/150‑1 (MQ=255) tGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACTGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGc < 1:466774/150‑1 (MQ=255) gAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCg < 2:449119/150‑1 (MQ=255) ggAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAcc < 1:230847/150‑1 (MQ=255) ggAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAcc < 2:3513018/150‑1 (MQ=255) gAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCg < 2:4155113/150‑1 (MQ=255) cAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCAt > 2:253903/1‑150 (MQ=255) aGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATc > 2:1387874/1‑150 (MQ=255) gACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCt < 2:3166637/150‑1 (MQ=255) gACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCt > 1:2150022/1‑150 (MQ=255) ccTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTAc > 2:637489/1‑150 (MQ=255) cTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGCATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACt < 1:88424/150‑1 (MQ=255) ggAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCa < 2:4618106/150‑1 (MQ=255) gAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCAt > 1:3152593/1‑150 (MQ=255) aaCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCAtt < 1:1634619/150‑1 (MQ=255) aaCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCAtt > 1:1540596/1‑150 (MQ=255) tCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAt > 2:3019741/1‑150 (MQ=255) tCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAt < 1:4093451/150‑1 (MQ=255) ccATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATg < 2:179492/150‑1 (MQ=255) ccATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATg < 2:1356623/150‑1 (MQ=255) cATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGc > 2:15329/1‑150 (MQ=255) tcgatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGa > 2:310275/1‑150 (MQ=255) tcgatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGa < 2:605975/150‑1 (MQ=255) tcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTCTGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGcc < 2:4576524/150‑1 (MQ=255) tcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGcc > 2:980285/1‑150 (MQ=255) cgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGccc > 2:386349/1‑150 (MQ=255) cgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGccc < 2:1662353/150‑1 (MQ=255) gCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCcg < 1:3973486/150‑1 (MQ=255) gCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCcg > 1:1892620/1‑150 (MQ=255) ccTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCcga < 2:4375658/150‑1 (MQ=255) agcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAg > 1:4422891/1‑150 (MQ=255) agcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTg < 1:1078852/150‑1 (MQ=255) gcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTgc < 1:3421610/150‑1 (MQ=255) ccTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTgcg < 2:1845519/150‑1 (MQ=255) cTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTgcgc < 1:2745447/150‑1 (MQ=255) cTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTgcgc > 1:4525925/1‑150 (MQ=255) aaCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCa < 2:2764330/150‑1 (MQ=255) aCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCAt > 1:3802754/1‑150 (MQ=255) ccGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCAtt > 1:2602254/1‑150 (MQ=255) gAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGc > 1:4222271/1‑150 (MQ=255) aaGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCa > 1:1143509/1‑150 (MQ=255) aGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCAc > 2:556636/1‑150 (MQ=255) tttGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCAcgc < 1:2331810/150‑1 (MQ=255) tATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGact < 2:2707940/150‑1 (MQ=255) cGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGactact < 1:2478444/150‑1 (MQ=255) gTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTgg < 2:1945786/150‑1 (MQ=255) gTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTgg < 2:2481802/150‑1 (MQ=255) ccTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATa > 1:3549544/1‑150 (MQ=255) cTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATaa < 2:1905945/150‑1 (MQ=255) cTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATaa > 2:4286956/1‑150 (MQ=255) tATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGACTAAc > 2:401088/1‑150 (MQ=255) tATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAAc > 1:3645954/1‑150 (MQ=255) tATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAAc > 1:428552/1‑150 (MQ=255) aTGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACg < 1:181546/150‑1 (MQ=255) aTGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACg < 1:2385433/150‑1 (MQ=255) tGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACgg > 1:4476315/1‑150 (MQ=255) gcgcGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTa < 2:1205000/150‑1 (MQ=255) cgAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTc < 1:224329/150‑1 (MQ=255) cgAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTc > 1:1465890/1‑150 (MQ=255) gAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGACTAACGGTCTTCg > 2:2054715/1‑150 (MQ=255) gAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCg < 2:3769836/150‑1 (MQ=255) cTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCa < 1:283560/150‑1 (MQ=255) cGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCatat < 2:731656/150‑1 (MQ=255) gAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTg < 1:4176416/150‑1 (MQ=255) gAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTg < 2:805563/150‑1 (MQ=255) cgcgACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGgcg > 1:1242956/1‑150 (MQ=255) cgcgACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGgcg < 1:2996587/150‑1 (MQ=255) gcgACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGgcgc > 1:251395/1‑150 (MQ=255) gACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTg > 1:2629906/1‑150 (MQ=255) gACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTg > 2:1622294/1‑150 (MQ=255) ccGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCg > 2:2572176/1‑150 (MQ=255) gTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTg < 2:3615556/150‑1 (MQ=255) gTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTg < 2:1075639/150‑1 (MQ=255) tACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTgg > 1:3697121/1‑150 (MQ=255) tACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTgg > 1:4368624/1‑150 (MQ=255) aCGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGc > 2:921226/1‑150 (MQ=255) aGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTg > 1:444681/1‑150 (MQ=255) cATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTgcc > 2:1669254/1‑150 (MQ=255) attaAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGccgccg > 2:2954292/1‑150 (MQ=255) ttaAAGGCATTAAAGATAGCACTGGTCAGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCgg > 1:3884585/1‑150 (MQ=255) aaaGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGa > 2:4477856/1‑150 (MQ=255) aaGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGaa < 2:2231690/150‑1 (MQ=255) aaGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGaa < 2:3324433/150‑1 (MQ=255) aGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAg < 1:2194295/150‑1 (MQ=255) aGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAg > 1:1710191/1‑150 (MQ=255) aGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAg > 2:877463/1‑150 (MQ=255) ggCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGt < 2:1323154/150‑1 (MQ=255) aaGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCTCCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTTAGc < 2:1557522/150‑1 (MQ=255) | TCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCAGAA > CP009273/4122632‑4122930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |