| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,301,569 | G→T | 16.9% | V97V (GTC→GTA) | alsB ← | D‑allose transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,301,569 | 0 | G | T | 16.9% | 798.6 / 101.6 | 258 | V97V (GTC→GTA) | alsB | D‑allose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (113/101); new base T (23/21); total (136/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
Only 100 of 266 total aligned reads displayed.
ACGACGCGCCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATC > CP009273/4301421‑4301718 | gacgCGCCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTAcc > 2:2850399/1‑150 (MQ=255) cgcCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGAt > 1:3304635/1‑150 (MQ=255) gcCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCCTGCGCGGGCGGCAGGCAGTACCAGAtt > 2:2164563/1‑150 (MQ=255) gcCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGAtt < 1:4544316/150‑1 (MQ=255) cTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCa > 2:4318684/1‑150 (MQ=255) cGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCTATTTTTTCATCGATATTAACCAGATAAATGCCATTTTTCCCTGCGCGGGCGACAGGCAAGACCAGATTCACAGa > 1:1991692/1‑150 (MQ=255) ccccGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAgg < 2:1078053/150‑1 (MQ=255) ccGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGAt < 2:2204834/150‑1 (MQ=255) cGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATa < 2:720300/150‑1 (MQ=255) cGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATa < 2:3256793/150‑1 (MQ=255) cGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATa < 1:3668050/150‑1 (MQ=255) gACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATaa > 1:161636/1‑150 (MQ=255) aaCGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGc > 2:2429667/1‑150 (MQ=255) aaCGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGc < 1:125579/150‑1 (MQ=255) aCGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCg < 2:1336517/150‑1 (MQ=255) ttATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAg < 1:1037830/150‑1 (MQ=255) tATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAgg < 1:3453764/150‑1 (MQ=255) tCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGTGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCg < 1:3152398/150‑1 (MQ=255) ggtggtGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGAt > 2:2287342/1‑150 (MQ=255) ggtggtGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGAt > 2:573114/1‑150 (MQ=255) gtggtgACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATa > 1:1239142/1‑150 (MQ=255) gtggtgACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATa > 2:840235/1‑150 (MQ=255) tgACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCtt < 2:316906/150‑1 (MQ=255) gACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCttt < 2:4586285/150‑1 (MQ=255) gACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCttt < 1:1722500/150‑1 (MQ=255) aCAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTg < 1:2473490/150‑1 (MQ=255) aCAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTg < 1:221722/150‑1 (MQ=255) cAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGt < 2:4517789/150‑1 (MQ=255) cAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGt > 2:870337/1‑150 (MQ=255) cAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGt > 2:3929246/1‑150 (MQ=255) aaaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTaa < 1:3323194/150‑1 (MQ=255) aaaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTaa > 2:4634659/1‑150 (MQ=255) aaaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTaa > 1:2738230/1‑150 (MQ=255) ttCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAAttttt > 1:2345219/1‑150 (MQ=255) tCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTtta < 2:3212853/150‑1 (MQ=255) cacaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatt < 1:118111/150‑1 (MQ=255) cacaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatt > 2:1792022/1‑150 (MQ=255) cacaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatt < 2:2520406/150‑1 (MQ=255) acaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatta < 2:1898213/150‑1 (MQ=255) caTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTAc < 2:3383631/150‑1 (MQ=255) aTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACt < 2:3265189/150‑1 (MQ=255) cAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCtt > 1:630388/1‑150 (MQ=255) aGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTc > 1:2867239/1‑150 (MQ=255) gCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCa < 1:3971627/150‑1 (MQ=255) cTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCaa > 1:4021503/1‑150 (MQ=255) cTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCaa > 1:2664086/1‑150 (MQ=255) tttttCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAAt < 2:2082096/150‑1 (MQ=255) ttCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAAc > 2:1006079/1‑150 (MQ=255) ttCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAAc < 1:3391969/150‑1 (MQ=255) tCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACt < 1:4226943/150‑1 (MQ=255) aGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGc > 1:2943462/1‑150 (MQ=255) gATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCa < 2:1658104/150‑1 (MQ=255) gATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTACATGCGCGGGCGACAGGCATGACCAGATTAACTTAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCa > 1:1734461/1‑150 (MQ=255) ttATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAAt > 1:1449137/1‑150 (MQ=255) ttATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAAt < 1:1078893/150‑1 (MQ=255) ttATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAAt > 1:3772453/1‑150 (MQ=255) aTTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGaaaa > 1:3006527/1‑150 (MQ=255) tttttCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATc > 1:716312/1‑150 (MQ=255) ttttCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCg > 2:2190756/1‑150 (MQ=255) tttCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGc > 2:1050045/1‑150 (MQ=255) ttCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAATATCGcc > 2:4086402/1‑150 (MQ=255) cATCGATATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCtt < 2:3648160/150‑1 (MQ=255) cATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCtt < 1:3740626/150‑1 (MQ=255) aTCGAGATTATCCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTc < 2:4295919/150‑1 (MQ=255) gagaTTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGa > 1:4141412/1‑150 (MQ=255) gaTTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAg < 2:262491/150‑1 (MQ=255) tAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGgag < 1:2164354/150‑1 (MQ=255) aaCCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGgaga > 2:1379966/1‑150 (MQ=255) gATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCaa < 2:4252108/150‑1 (MQ=255) aaaTGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCaaaaa > 1:1953815/1‑150 (MQ=255) aaTGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAat > 1:945970/1‑150 (MQ=255) aaTGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAat < 1:185792/150‑1 (MQ=255) gCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATc < 1:3495869/150‑1 (MQ=255) ccTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCa < 1:2287258/150‑1 (MQ=255) ttttttCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAAc < 2:167841/150‑1 (MQ=255) ttttCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGc > 1:3378134/1‑150 (MQ=255) tttCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGTGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCt > 2:2777603/1‑150 (MQ=255) tttCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCt < 1:3560607/150‑1 (MQ=255) tCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGa > 2:701504/1‑150 (MQ=255) ccATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGAc > 2:958091/1‑150 (MQ=255) ccATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGAc < 1:3252618/150‑1 (MQ=255) aTGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGc > 2:212788/1‑150 (MQ=255) tGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGcc > 2:797710/1‑150 (MQ=255) gcgcGGGCGACAGGCATTACAAGATTCACTGAGGATAATGGAGAGAAGGCGATTCCTTTGTAATTTTTATTACTGAGATCTTCAACTAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGccc < 2:2492197/150‑1 (MQ=255) gcgcGGGAGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGccc < 2:4188905/150‑1 (MQ=255) cgcgGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCa > 1:2641435/1‑150 (MQ=255) gcgGGCGACAGTCATGACCAGATTCACTGAGGATAATGTAGCGAAGGCGATAACATTGAAATTTATATTACTGAGATCTTCCAATAACTGCAATATAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAg > 1:3809057/1‑150 (MQ=255) gggCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAgtg > 2:4152415/1‑150 (MQ=255) gACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGtttt > 2:3114141/1‑150 (MQ=255) aCAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGttttt > 2:1587196/1‑150 (MQ=255) aCAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGttttt > 2:234273/1‑150 (MQ=255) aCAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGttttt > 1:2035209/1‑150 (MQ=255) aCAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGttttt > 1:310624/1‑150 (MQ=255) cAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTg > 2:3288682/1‑150 (MQ=255) cAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAAACGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTg > 2:1354320/1‑150 (MQ=255) ggCATGTCCAGATTCACTGAGGATAATGGAGCGAATGCGATACCTTTGTATTTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCt < 2:165352/150‑1 (MQ=255) gCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCtt > 1:1492803/1‑150 (MQ=255) gCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCtt < 1:3571051/150‑1 (MQ=255) gACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATc > 1:272323/1‑150 (MQ=255) gACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATc < 1:3881313/150‑1 (MQ=255) | ACGACGCGCCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATC > CP009273/4301421‑4301718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |