| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,335,195 | G→T | 5.8% | L61I (CTC→ATC) | yjdF ← | DUF2238 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,335,195 | 0 | G | T | 5.8% | 1071.2 / 26.6 | 277 | L61I (CTC→ATC) | yjdF | DUF2238 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (143/118); new base T (6/10); total (149/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
Only 100 of 285 total aligned reads displayed.
CAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTGCGCTGGTG > CP009273/4335046‑4335343 | gCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGagca < 2:402811/150‑1 (MQ=255) cccTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGagcagc < 2:4554014/150‑1 (MQ=255) ccTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAgcg < 2:1029053/150‑1 (MQ=255) tGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAgcggc > 2:3480808/1‑150 (MQ=255) gAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGt > 2:3029793/1‑150 (MQ=255) aGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGTAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACg > 1:4384802/1‑150 (MQ=255) aGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACg < 2:2655470/150‑1 (MQ=255) ccAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAAc < 2:924591/150‑1 (MQ=255) ccAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAAc > 1:3534181/1‑150 (MQ=255) cAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCACCGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACg < 2:2341362/150‑1 (MQ=255) cAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACg < 2:2308167/150‑1 (MQ=255) cAGCTTGTCATACGGATTACGACTCAACCCCAGCCAGTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACg < 2:2341412/150‑1 (MQ=255) aGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGt > 1:3592229/1‑150 (MQ=255) cTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCt > 1:4059724/1‑150 (MQ=255) ttGTCATACGGATTACGACTCCACCCCAGCCATTCCTGCACCTCAAAACCCCCGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTg < 2:2071908/150‑1 (MQ=255) tGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTgg > 1:2041044/1‑150 (MQ=255) tGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTgg > 2:3338863/1‑150 (MQ=255) tGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTgg < 1:2668239/150‑1 (MQ=255) gTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGc < 1:4340880/150‑1 (MQ=255) gTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGc > 2:1442942/1‑150 (MQ=255) tCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCg > 1:2374843/1‑150 (MQ=255) aTACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGt > 1:4464491/1‑150 (MQ=255) aTACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGt > 1:3390658/1‑150 (MQ=255) aTACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGt > 1:3458794/1‑150 (MQ=255) tACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTTGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTg > 2:1303551/1‑150 (MQ=255) ggATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCa > 2:3396147/1‑150 (MQ=255) aTTACGACTCAACCCCAGCCATTCCTGCACCTCAACACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAg < 1:3666662/150‑1 (MQ=255) aCGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAg < 2:1539138/150‑1 (MQ=255) aCGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAg > 2:2552161/1‑150 (MQ=255) cTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGc < 2:3584281/150‑1 (MQ=255) cTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGc > 1:510266/1‑150 (MQ=255) cAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTg > 2:4356910/1‑150 (MQ=255) cAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTg < 2:2106422/150‑1 (MQ=255) ccccAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATATAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCAc > 2:2578269/1‑150 (MQ=255) cccAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACg > 1:2329976/1‑150 (MQ=255) ccATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaat > 1:4556206/1‑150 (MQ=255) ccATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaat > 1:804983/1‑150 (MQ=255) ccATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaat > 2:3688313/1‑150 (MQ=255) cATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaata > 1:3037740/1‑150 (MQ=255) aTTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaataa > 2:135726/1‑150 (MQ=255) ttCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaataat < 1:1674276/150‑1 (MQ=255) tCCTGCACCTCAACACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATc < 1:964527/150‑1 (MQ=255) tCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATc > 1:3070857/1‑150 (MQ=255) tGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCAcc < 2:202330/150‑1 (MQ=255) cACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCgg > 1:4294786/1‑150 (MQ=255) cACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCgg > 2:170072/1‑150 (MQ=255) aCCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGgt > 2:330445/1‑150 (MQ=255) aCCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGgt > 2:3935207/1‑150 (MQ=255) aCCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATAGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGgt > 2:1739687/1‑150 (MQ=255) ccTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGgtg > 1:2481413/1‑150 (MQ=255) tCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTc < 2:3978036/150‑1 (MQ=255) aaaaCCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCAc < 1:3866455/150‑1 (MQ=255) aaaCCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACt < 2:1459313/150‑1 (MQ=255) aaCCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACtt > 2:3156433/1‑150 (MQ=255) aCCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTc > 2:2023198/1‑150 (MQ=255) aaCGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCAt > 2:4143588/1‑150 (MQ=255) ggggACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAg < 1:4086893/150‑1 (MQ=255) gACTTTTGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCa < 1:2881095/150‑1 (MQ=255) aCTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAg > 1:1083623/1‑150 (MQ=255) tttCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGt < 1:558962/150‑1 (MQ=255) cgTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGtt < 1:4380482/150‑1 (MQ=255) gTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGttt < 1:1698571/150‑1 (MQ=255) gTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGttt < 2:1677977/150‑1 (MQ=255) tAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTg > 1:2392863/1‑150 (MQ=255) aGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGt < 1:897578/150‑1 (MQ=255) aGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGt > 1:5258/1‑150 (MQ=255) gtgtATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCa < 2:1975698/150‑1 (MQ=255) gtATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATg < 2:3815502/150‑1 (MQ=255) gtATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATg < 1:3449285/150‑1 (MQ=255) aTTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATggg > 1:1438860/1‑150 (MQ=255) tCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGa > 1:677450/1‑150 (MQ=255) cgccgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGaaa > 1:1587787/1‑150 (MQ=255) gccgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAAt < 1:1032880/150‑1 (MQ=255) gccgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAAt > 1:3792722/1‑150 (MQ=255) gccgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAAt < 1:900629/150‑1 (MQ=255) ccgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATg > 1:1680348/1‑150 (MQ=255) gACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGcc > 2:2095575/1‑150 (MQ=255) cATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGt > 2:4250440/1‑150 (MQ=255) cATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGt > 2:4280635/1‑150 (MQ=255) cAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGtata < 2:4003196/150‑1 (MQ=255) aGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATaa > 2:822922/1‑150 (MQ=255) atgatgGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATc < 2:3826150/150‑1 (MQ=255) atgGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAgg < 1:1931843/150‑1 (MQ=255) cGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCCCCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTa < 2:735530/150‑1 (MQ=255) gTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTaa > 1:3223738/1‑150 (MQ=255) gTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTaa > 2:693391/1‑150 (MQ=255) tGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAAc > 1:1281015/1‑150 (MQ=255) gAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACg > 2:3237733/1‑150 (MQ=255) aaGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGt > 2:2623504/1‑150 (MQ=255) aGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGtt > 2:2869894/1‑150 (MQ=255) aGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGtt < 2:2435733/150‑1 (MQ=255) gAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAg > 1:2069525/1‑150 (MQ=255) aaaaTGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACACTAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGc < 2:4211940/150‑1 (MQ=255) tGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCa < 1:2572964/150‑1 (MQ=255) gAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAg < 1:1454619/150‑1 (MQ=255) gCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTg < 1:3719288/150‑1 (MQ=255) gCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTg > 2:4636535/1‑150 (MQ=255) gCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTg < 1:885093/150‑1 (MQ=255) cGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTgc < 1:2994296/150‑1 (MQ=255) taGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTGCGCTg < 1:762594/150‑1 (MQ=255) | CAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTGCGCTGGTG > CP009273/4335046‑4335343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |