| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,346,500 | G→T | 12.3% | N645K (AAC→AAA) | cadA ← | lysine decarboxylase, acid‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,346,500 | 0 | G | T | 12.3% | 880.7 / 64.2 | 248 | N645K (AAC→AAA) | cadA | lysine decarboxylase, acid‑inducible |
| Reads supporting (aligned to +/- strand): ref base G (114/103); new base T (21/10); total (135/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATTGTGGTGAACAATC > CP009273/4346353‑4346647 | gTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGtt < 1:3883660/150‑1 (MQ=255) tGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTa < 2:639744/150‑1 (MQ=255) aaTATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAAt > 1:1500532/1‑150 (MQ=255) atatCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATa > 2:208354/1‑150 (MQ=255) tatCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATAc < 1:1274943/150‑1 (MQ=255) cGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGAc > 1:4004452/1‑150 (MQ=255) cGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGAc < 1:3259259/150‑1 (MQ=255) tttCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTa > 2:3863997/1‑150 (MQ=255) tCAAAG‑CCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCa < 2:4128421/150‑1 (MQ=255) aaaGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCAt > 2:2577508/1‑150 (MQ=255) aaaGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCAt < 2:3250142/150‑1 (MQ=255) aaGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCAtt > 2:804522/1‑150 (MQ=255) aGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCAttt > 2:1712585/1‑150 (MQ=255) gCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTtc > 2:1840067/1‑150 (MQ=255) ccGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTtcgt > 1:1056884/1‑150 (MQ=255) ccGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTtcgt > 1:3105470/1‑150 (MQ=255) cGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTtcgtc < 1:2844300/150‑1 (MQ=255) ggATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTtcgtcg > 2:2328431/1‑150 (MQ=255) gATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCAGTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGa > 2:4290058/1‑150 (MQ=255) tAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAgg > 2:188754/1‑150 (MQ=255) aGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGt < 2:509861/150‑1 (MQ=255) tGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTaa > 1:4123725/1‑150 (MQ=255) gAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTaaa > 1:3276314/1‑150 (MQ=255) gAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTaaa < 2:210447/150‑1 (MQ=255) gAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTaaa < 2:722173/150‑1 (MQ=255) gcgcCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAAct < 1:2805045/150‑1 (MQ=255) ccGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAActtct > 1:1487771/1‑150 (MQ=255) cGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAActtctt > 1:273530/1‑150 (MQ=255) cGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAActtctt > 2:2760835/1‑150 (MQ=255) cGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAActtctt > 2:3045915/1‑150 (MQ=255) ttCACTCAGCTTCTGCAGGATCTGCAGAACCTGACGGCTTTCTTCGGTGTTCATTTCACCCGGCATTACCTGATGTACTCGCGTCGGTTACGGTAGTATCTTTTTGGCTTTAATACGTCCTAGCATTTCGTCTAGGTAAACTTCTTCGGt < 1:4498275/150‑1 (MQ=255) ttCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGt > 1:704962/1‑150 (MQ=255) tCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTc > 2:4243437/1‑150 (MQ=255) cacacaGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCa > 2:3496054/1‑150 (MQ=255) acacaGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCAt > 1:2332489/1‑150 (MQ=255) caGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATAcc > 2:1696595/1‑150 (MQ=255) aGCATCTGCAGGAACTCCTGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCg < 1:3611799/150‑1 (MQ=255) aGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCg > 1:632423/1‑150 (MQ=255) aGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCg < 1:2061491/150‑1 (MQ=255) cATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTg < 2:706268/150‑1 (MQ=255) gCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGct < 2:3720968/150‑1 (MQ=255) aGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGctct < 1:1712585/150‑1 (MQ=255) aGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGctct < 1:3322397/150‑1 (MQ=255) ggAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCtt > 2:1491006/1‑150 (MQ=255) aCTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCt < 2:3276400/150‑1 (MQ=255) cTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTg > 2:3903764/1‑150 (MQ=255) ccAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGa < 2:1195753/150‑1 (MQ=255) aGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAAt > 2:322187/1‑150 (MQ=255) aGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAAt < 1:2072738/150‑1 (MQ=255) aGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAAt > 1:3828409/1‑150 (MQ=255) aGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAAt > 2:2832517/1‑150 (MQ=255) cGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATgcagc < 1:3808957/150‑1 (MQ=255) cGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATgcagc > 2:2553845/1‑150 (MQ=255) gACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCAt < 1:2893588/150‑1 (MQ=255) aCGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATa < 2:2151362/150‑1 (MQ=255) gCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGCCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACgg > 1:947308/1‑150 (MQ=255) tttCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAg < 2:3184281/150‑1 (MQ=255) tcttcGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTc < 2:2383249/150‑1 (MQ=255) cttcGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCa > 2:2552789/1‑150 (MQ=255) tcGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCAtt < 1:2813494/150‑1 (MQ=255) cGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTa > 1:136649/1‑150 (MQ=255) gTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTAcc > 2:4610731/1‑150 (MQ=255) cATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCAtcgt > 1:800841/1‑150 (MQ=255) aTTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCAtcgtc < 2:1991964/150‑1 (MQ=255) tttCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCAtcgtcg < 2:4065471/150‑1 (MQ=255) tttCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCAtcgtcg < 1:27669/150‑1 (MQ=255) cACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGgca < 2:2590284/150‑1 (MQ=255) cACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGgca < 1:2594958/150‑1 (MQ=255) cccGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGgcagc > 2:2167189/1‑150 (MQ=255) ccGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGACTGCAGCATACGGAGTCATTACCATCGTCGgcagca > 2:2354746/1‑150 (MQ=255) gCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACtt < 2:1458123/150‑1 (MQ=255) cAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATgc > 1:3031962/1‑150 (MQ=255) agagGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATgcg > 1:1269123/1‑150 (MQ=255) agagGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATgcg > 2:1494995/1‑150 (MQ=255) gAACTCCCGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGAt > 1:4528438/1‑150 (MQ=255) aaCTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATa > 1:4638490/1‑150 (MQ=255) aCTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATAc > 2:2028874/1‑150 (MQ=255) cccGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATc < 2:3632850/150‑1 (MQ=255) ccGGCGGGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCa > 2:2799726/1‑150 (MQ=255) ggcggGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGa < 2:2507388/150‑1 (MQ=255) ggcggGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGa < 1:1335598/150‑1 (MQ=255) cggGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATc < 1:583069/150‑1 (MQ=255) cggGTACGGAAGGATCATATTGGCTTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATc < 2:28669/150‑1 (MQ=255) cggGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATc < 1:2755190/150‑1 (MQ=255) gggTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATcc < 1:830105/150‑1 (MQ=255) gggTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATcc < 1:4133424/150‑1 (MQ=255) tACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGc < 1:4292603/150‑1 (MQ=255) tACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGc > 2:869245/1‑150 (MQ=255) tACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGc > 1:1998399/1‑150 (MQ=255) tACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGc > 2:348480/1‑150 (MQ=255) ggAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGa > 2:472802/1‑150 (MQ=255) gAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGAt > 1:2552206/1‑150 (MQ=255) aaGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGAtt > 2:3977962/1‑150 (MQ=255) aGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATtg < 1:804522/150‑1 (MQ=255) ggATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATtgt < 2:909428/150‑1 (MQ=255) gATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATtgtg < 1:2952494/150‑1 (MQ=255) aTCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATTgtgg < 1:400165/150‑1 (MQ=255) cATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATTgtggtg < 2:4503725/150‑1 (MQ=255) atatTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGAACTTCAAATGCGAGATACCTCAGATCCGGCAGATTGTGGTGa > 1:222148/1‑150 (MQ=255) gCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATTGTGGTGAACAATc < 2:414540/150‑1 (MQ=255) | GTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGAACTCCAGAACCGGACGGCTTTCTTCGGTGATCATTTCACCCGGCATTACCAGAGGAACTCCCGGCGGGTACGGAAGGATCATATTGGCGTTAATACGACCTACCATTTCGTCGAGGTAAACTTCTTCGGTCATACCGTGCAGCTCTTTCTGGAATGCAGCATACGGAGTCATTACCATCGTCGGCAGCACTTCAAATGCGCGATACATCAGATCCGGCAGATTGTGGTGAACAATC > CP009273/4346353‑4346647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |