| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,461,317 | G→T | 60.8% | A299E (GCG→GAG) | pyrB ← | aspartate carbamoyltransferase, catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,461,317 | 0 | G | T | 60.8% | 114.8 / inf | 304 | A299E (GCG→GAG) | pyrB | aspartate carbamoyltransferase, catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base G (70/49); new base T (96/89); total (166/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 306 total aligned reads displayed.
ACAGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCGAAGA > CP009273/4461168‑4461466 | aGACTCAACATCTTAAAACCGATCTGGGCGGGTATATTGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTTCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCATAACCAGTGCCAGTAACGcc < 1:2251391/150‑1 (MQ=255) aGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTcc < 2:503793/150‑1 (MQ=255) aGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTcc > 2:2043393/1‑150 (MQ=255) aGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGcc > 2:3629142/1‑150 (MQ=255) gACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATATCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCt > 1:2311321/1‑150 (MQ=255) aaCAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgcga > 1:1088993/1‑150 (MQ=255) gCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGgcgagcga < 2:2665410/150‑1 (MQ=255) ttAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGaaa < 1:538247/150‑1 (MQ=255) tAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGaaaa > 2:240123/1‑150 (MQ=255) tAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGaaaa > 1:2967855/1‑150 (MQ=255) aaaaCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAAt > 1:542806/1‑150 (MQ=255) aaCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATcc > 1:8262/1‑150 (MQ=255) ccGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCg < 2:350870/150‑1 (MQ=255) gATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGtt < 2:1896998/150‑1 (MQ=255) gggCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgcctg > 1:308203/1‑150 (MQ=255) gCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgcctgcc < 1:156511/150‑1 (MQ=255) cGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTgcctgcct > 1:841496/1‑150 (MQ=255) ggggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGcctgcctg > 1:2741851/1‑150 (MQ=255) ggggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCAGGCGAGCGAAAATCCCGTTGcctgcctg > 1:4450820/1‑150 (MQ=255) gggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCctgcctgc > 2:554162/1‑150 (MQ=255) gggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCctgcctgc > 2:2081916/1‑150 (MQ=255) ggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCctgct < 2:3862588/150‑1 (MQ=255) gATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCctgctg > 2:2649697/1‑150 (MQ=255) tatGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGa > 2:1917568/1‑150 (MQ=255) tatGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGa > 1:3399687/1‑150 (MQ=255) tGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAg > 1:228172/1‑150 (MQ=255) tGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAg < 2:4027416/150‑1 (MQ=255) cAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTAcc < 1:1780527/150‑1 (MQ=255) aaTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCa > 2:439035/1‑150 (MQ=255) tACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGc > 2:33516/1‑150 (MQ=255) aCCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCg < 1:1031634/150‑1 (MQ=255) tGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGtgtg < 1:2891203/150‑1 (MQ=255) ccGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGc > 1:3694887/1‑150 (MQ=255) gTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGttt < 1:3414925/150‑1 (MQ=255) gTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTACTGGAAGTACCAGGCGTGTGGCGttt > 1:1483566/1‑150 (MQ=255) tAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTAt < 2:2867973/150‑1 (MQ=255) atatCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTCACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCa < 2:1321647/150‑1 (MQ=255) tAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCaa > 2:1909636/1‑150 (MQ=255) gCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACa < 1:2875613/150‑1 (MQ=255) cTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt < 2:3056194/150‑1 (MQ=255) cTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt < 2:3810215/150‑1 (MQ=255) cAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCg > 2:2280896/1‑150 (MQ=255) cTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGc < 1:991259/150‑1 (MQ=255) gCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCaa > 1:3970270/1‑150 (MQ=255) gCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCaa < 1:4343682/150‑1 (MQ=255) cAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAAt > 2:282948/1‑150 (MQ=255) ttatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcatca > 2:3183834/1‑150 (MQ=255) ttatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcatca > 2:3101366/1‑150 (MQ=255) tatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCaa > 1:2708335/1‑150 (MQ=255) tatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCaa > 1:2708393/1‑150 (MQ=255) tatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCaa > 1:4499489/1‑150 (MQ=255) gtgtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGAGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcg > 2:2785351/1‑150 (MQ=255) gtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcgcg < 1:2015779/150‑1 (MQ=255) gtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcgcg < 2:2686660/150‑1 (MQ=255) aTCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGc > 1:670817/1‑150 (MQ=255) aTCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGc > 2:1790861/1‑150 (MQ=255) tctcTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCg < 2:1062603/150‑1 (MQ=255) tctcTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCg < 1:1984184/150‑1 (MQ=255) tctcTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCg < 1:1579897/150‑1 (MQ=255) ctATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGAt < 1:617001/150‑1 (MQ=255) tATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATg < 1:3740105/150‑1 (MQ=255) aTTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgc > 1:3521936/1‑150 (MQ=255) aTTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgc > 1:3842820/1‑150 (MQ=255) ttCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgcag > 1:2758197/1‑150 (MQ=255) tCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgcagc < 2:89835/150‑1 (MQ=255) ccccTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgcagca < 1:1223068/150‑1 (MQ=255) ccccTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgcagca > 2:2846355/1‑150 (MQ=255) ccTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACt < 1:4202813/150‑1 (MQ=255) cTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACtt > 2:4292985/1‑150 (MQ=255) tACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTc > 2:3548042/1‑150 (MQ=255) tACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATAtt > 1:2387418/1‑150 (MQ=255) tACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATAtt > 1:1886108/1‑150 (MQ=255) aGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCt < 2:3205312/150‑1 (MQ=255) aGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCt > 1:3105897/1‑150 (MQ=255) aGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCt > 2:1168497/1‑150 (MQ=255) aGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCt > 1:2903224/1‑150 (MQ=255) gATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCtt < 1:121462/150‑1 (MQ=255) aTCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCttt < 2:400435/150‑1 (MQ=255) cgcgATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTgg < 1:2318983/150‑1 (MQ=255) cgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCg > 2:1833257/1‑150 (MQ=255) cgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTGTGGCg > 1:285800/1‑150 (MQ=255) gATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGt < 1:2627051/150‑1 (MQ=255) aTTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGtt < 2:1088993/150‑1 (MQ=255) ttCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtg < 2:3488718/150‑1 (MQ=255) ttCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtg > 2:1987118/1‑150 (MQ=255) cAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg < 1:908273/150‑1 (MQ=255) cAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg < 1:679658/150‑1 (MQ=255) aGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTgg < 1:2043433/150‑1 (MQ=255) aGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTgg > 2:839556/1‑150 (MQ=255) aGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTgg > 1:3306923/1‑150 (MQ=255) gAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGga > 2:25658/1‑150 (MQ=255) aCCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGgaga < 2:3065799/150‑1 (MQ=255) aCCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGgaga < 2:3684947/150‑1 (MQ=255) aGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCg > 1:2530821/1‑150 (MQ=255) gTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGc > 1:4335566/1‑150 (MQ=255) gCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTg < 2:2741937/150‑1 (MQ=255) ccAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTgg > 2:161800/1‑150 (MQ=255) aGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGgcg > 2:79070/1‑150 (MQ=255) gTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGgcgc < 1:4032966/150‑1 (MQ=255) gTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGgcgc > 1:2790301/1‑150 (MQ=255) | ACAGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCGAAGA > CP009273/4461168‑4461466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |