| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,474,993 | G→T | 19.1% | S259* (TCG→TAG) | pepA ← | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,474,993 | 0 | G | T | 19.1% | 809.1 / 118.0 | 269 | S259* (TCG→TAG) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Reads supporting (aligned to +/- strand): ref base G (117/100); new base T (22/30); total (139/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 276 total aligned reads displayed.
CCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGC > CP009273/4474844‑4475142 | ccGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCg > 2:3675098/1‑150 (MQ=255)ccGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCg < 2:2870586/150‑1 (MQ=255)ccGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCg > 1:105041/1‑150 (MQ=255) cATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGtt > 2:4117631/1‑150 (MQ=255) cATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGtt > 2:2790614/1‑150 (MQ=255) aTCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTg > 1:1135091/1‑150 (MQ=255) cATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCttt < 1:793586/150‑1 (MQ=255) cATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCttt < 1:65503/150‑1 (MQ=255) tCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGt > 1:515567/1‑150 (MQ=255) ccGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCa < 1:3658535/150‑1 (MQ=255) cGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCaa < 1:4616291/150‑1 (MQ=255) gTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAAt > 1:1902746/1‑150 (MQ=255) aaCCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCAAAACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCAc > 1:3840528/1‑150 (MQ=255) aCCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCAcc < 1:2133619/150‑1 (MQ=255) cTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACa < 2:1290839/150‑1 (MQ=255) gcaccgcacATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGc > 1:2328285/1‑150 (MQ=255) gcaccgcacATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGc < 2:2920639/150‑1 (MQ=255) accgcacATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGa > 2:2361657/1‑150 (MQ=255) atatCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGttt < 2:594262/150‑1 (MQ=255) tatCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGtttt < 1:713090/150‑1 (MQ=255) tatCGTACGTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGtttt < 1:2867655/150‑1 (MQ=255) tACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGaa < 2:2260425/150‑1 (MQ=255) aCTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAAc < 1:2508621/150‑1 (MQ=255) aCTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAAc > 2:2475280/1‑150 (MQ=255) cTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAAcc < 2:440934/150‑1 (MQ=255) cTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAAcc < 2:3932417/150‑1 (MQ=255) cTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAAcc > 2:2726445/1‑150 (MQ=255) ttCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAAccc > 2:1205980/1‑150 (MQ=255) atctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTga > 1:1185592/1‑150 (MQ=255) tctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTgac < 2:1634833/150‑1 (MQ=255) ctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTgacc < 1:1358920/150‑1 (MQ=255) tcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTgaccg < 2:4460195/150‑1 (MQ=255) ccATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGaccgaccg < 1:2283334/150‑1 (MQ=255) aTGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGcc > 2:3264454/1‑150 (MQ=255) tGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCa > 1:3922663/1‑150 (MQ=255) cTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGAt > 2:2076740/1‑150 (MQ=255) cTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAgg < 2:3034454/150‑1 (MQ=255) aaGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAAt > 1:853210/1‑150 (MQ=255) aaGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAAt > 1:3272185/1‑150 (MQ=255) aGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATg > 1:4431920/1‑150 (MQ=255) cTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCAt > 1:2180876/1‑150 (MQ=255) cTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCAt < 1:3008294/150‑1 (MQ=255) ttGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATc > 2:2918086/1‑150 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc < 2:2206311/150‑1 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc > 2:2669164/1‑150 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc < 2:1972449/150‑1 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc < 1:1998351/150‑1 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc < 1:4019024/150‑1 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc < 1:4018865/150‑1 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc > 1:2734084/1‑150 (MQ=255) tGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcc > 2:3448931/1‑150 (MQ=255) aTCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATcccc > 2:1525780/1‑150 (MQ=255) tCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCa < 2:2113732/150‑1 (MQ=255) tCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCa < 1:2602519/150‑1 (MQ=255) cGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAg > 2:647678/1‑150 (MQ=255) cGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAg > 1:2026303/1‑150 (MQ=255) gaTACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGctc > 2:4355336/1‑150 (MQ=255) gaTACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGctc > 2:422325/1‑150 (MQ=255) gaTACCGCCGGAGTCGAAGGTCAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGctc > 2:1918453/1‑150 (MQ=255) aTACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGctct > 2:4122059/1‑150 (MQ=255) tACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCtt < 2:1087752/150‑1 (MQ=255) ccgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATc > 1:1450456/1‑150 (MQ=255) ccgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATc < 2:3512526/150‑1 (MQ=255) cgGAGTCGAAGGTTAAACCTTTACCCACCAGCTCGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATct < 2:1562966/150‑1 (MQ=255) cgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATct > 1:2808972/1‑150 (MQ=255) cgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATct > 1:2240390/1‑150 (MQ=255) cgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATct > 2:381055/1‑150 (MQ=255) ggAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATctg > 2:20457/1‑150 (MQ=255) gTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATctgctg > 2:767619/1‑150 (MQ=255) tCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGt > 1:755775/1‑150 (MQ=255) cGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGtt < 1:4083502/150‑1 (MQ=255) gAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTc > 1:1378252/1‑150 (MQ=255) gAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTc < 2:741385/150‑1 (MQ=255) aaGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCg < 2:4338006/150‑1 (MQ=255) gTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCg < 1:4419592/150‑1 (MQ=255) ttAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGa > 2:2115773/1‑150 (MQ=255) aaaCCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATa > 1:2951350/1‑150 (MQ=255) aaaCCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATa < 2:1731313/150‑1 (MQ=255) ttACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCgg < 2:1488918/150‑1 (MQ=255) ttACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCgg > 1:1749426/1‑150 (MQ=255) caccaGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtgat < 1:3465114/150‑1 (MQ=255) caGCACGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGAc < 2:2598639/150‑1 (MQ=255) aGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACa > 1:2043994/1‑150 (MQ=255) cACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACAtt < 1:3800804/150‑1 (MQ=255) aCGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTc < 2:2027071/150‑1 (MQ=255) aCGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTc < 1:3155368/150‑1 (MQ=255) cGATTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCt < 2:1827154/150‑1 (MQ=255) gATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCtt < 2:1619706/150‑1 (MQ=255) gATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCtt < 1:705807/150‑1 (MQ=255) aTTGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTg > 2:2500351/1‑150 (MQ=255) tGGGCGTGCATCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCt < 1:788260/150‑1 (MQ=255) gggCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTg > 2:10675/1‑150 (MQ=255) ggCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGt < 1:4149287/150‑1 (MQ=255) tGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCt < 1:3326553/150‑1 (MQ=255) cATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGt < 2:515567/150‑1 (MQ=255) aTCTTCCTACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTc < 1:2682845/150‑1 (MQ=255) ttCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcagc < 1:811855/150‑1 (MQ=255) tCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcagcc > 1:205713/1‑150 (MQ=255) tCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcagcc > 2:2296512/1‑150 (MQ=255) gACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcagccagc > 1:620334/1‑150 (MQ=255) | CCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGC > CP009273/4474844‑4475142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |