| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,475,510 | G→T | 10.6% | R87S (CGT→AGT) | pepA ← | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,475,510 | 0 | G | T | 10.6% | 952.1 / 56.6 | 260 | R87S (CGT→AGT) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Reads supporting (aligned to +/- strand): ref base G (117/115); new base T (17/11); total (134/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 262 total aligned reads displayed.
CGTCTCTTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTGATTT > CP009273/4475361‑4475659 | ctTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCAt < 1:5718/150‑1 (MQ=255) ctTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGATTTCTGAATAACCTGCTAGTACTGACGCTCAt > 2:2646562/1‑150 (MQ=255) ttttGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATc > 2:264737/1‑150 (MQ=255) ttttGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGGATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATc > 2:1727225/1‑150 (MQ=255) ttGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCa > 1:2154986/1‑150 (MQ=255) tGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAg > 2:2093696/1‑150 (MQ=255) gTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCa > 2:3278319/1‑150 (MQ=255) cGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGtt < 1:3634313/150‑1 (MQ=255) gACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTc > 2:967512/1‑150 (MQ=255) aCAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCt > 2:2925440/1‑150 (MQ=255) cAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCtt > 2:3642014/1‑150 (MQ=255) cAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCtt < 1:2607739/150‑1 (MQ=255) aGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCttt > 1:3529565/1‑150 (MQ=255) aGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCttt < 1:3579689/150‑1 (MQ=255) aGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCttt < 1:132067/150‑1 (MQ=255) gCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTg < 2:2308352/150‑1 (MQ=255) cTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGcc < 1:2548114/150‑1 (MQ=255) tGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCg < 1:2659053/150‑1 (MQ=255) tGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCg < 1:3658855/150‑1 (MQ=255) cGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCaa > 2:867464/1‑150 (MQ=255) cGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCaa < 1:3889952/150‑1 (MQ=255) cACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAAcc > 2:863940/1‑150 (MQ=255) cACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAAcc > 2:807300/1‑150 (MQ=255) tttCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAAt < 1:1419152/150‑1 (MQ=255) tCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATaa > 1:4564209/1‑150 (MQ=255) cAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAgg < 2:1328877/150‑1 (MQ=255) agtTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGaa > 2:2956033/1‑150 (MQ=255) agtTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGaa > 1:503397/1‑150 (MQ=255) agtTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCAAGCTCACGTTCTTTGCCGCAACCAATAAGGAGaa > 2:1198065/1‑150 (MQ=255) gttgttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAAt < 1:1049/150‑1 (MQ=255) gttgttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAAt < 1:2311236/150‑1 (MQ=255) gttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCg < 2:3115798/150‑1 (MQ=255) gttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCg > 1:3202665/1‑150 (MQ=255) ttACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGc > 2:1026648/1‑150 (MQ=255) tACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCt > 2:4306518/1‑150 (MQ=255) tACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCt < 1:3544818/150‑1 (MQ=255) tACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCt < 2:4623434/150‑1 (MQ=255) cGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCg > 1:4363616/1‑150 (MQ=255) cGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCg > 2:1935638/1‑150 (MQ=255) cGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCACAACCAATAAGGAGAATTCGCTCg < 1:4059185/150‑1 (MQ=255) gCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGa > 1:3842276/1‑150 (MQ=255) ccTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGaa > 2:3640636/1‑150 (MQ=255) aaCGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTAc > 2:1475178/1‑150 (MQ=255) tGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTc < 1:4127784/150‑1 (MQ=255) aGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGa > 2:3891088/1‑150 (MQ=255) cagtcagAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACAt > 2:1450142/1‑150 (MQ=255) tcagAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGt < 1:4428040/150‑1 (MQ=255) gAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgca < 1:4005392/150‑1 (MQ=255) gAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgca < 2:1539206/150‑1 (MQ=255) aGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgcagca < 2:1714183/150‑1 (MQ=255) aGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTgcagca < 1:1120242/150‑1 (MQ=255) cAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGcaac < 1:471293/150‑1 (MQ=255) cAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGcaac < 1:305258/150‑1 (MQ=255) gACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGcaacaa > 2:2795595/1‑150 (MQ=255) gACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGcaacaa > 1:1750282/1‑150 (MQ=255) gCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTc < 1:2852108/150‑1 (MQ=255) aTTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGcccc > 1:310821/1‑150 (MQ=255) tGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCgg > 1:32721/1‑150 (MQ=255) gAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGt < 2:3529565/150‑1 (MQ=255) gAGCCAGGATCATACAGCGGATTAATGGTGTTCTGATTAACCTGCATGTACTGACGCTCATCCAGATAACGGTCGATGCCGCAACCAATAAGGAGAATTCGCACGCACAGGACCTTCGGAACATGGTGCAGCAACAATTTCTGCGCCggg > 2:2048795/1‑149 (MQ=255) cAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTTCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttc < 2:489250/150‑1 (MQ=255) aGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttcc > 2:2355389/1‑150 (MQ=255) aTCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttccttc < 1:1201487/150‑1 (MQ=255) tCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttccttcc > 1:1588503/1‑150 (MQ=255) tCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTttccttcc < 2:2189732/150‑1 (MQ=255) cATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCa < 1:1134763/150‑1 (MQ=255) aTTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAg > 2:3415042/1‑150 (MQ=255) tCAGCGTATTAATGGTTTTCTGTATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGtt < 1:861110/150‑1 (MQ=255) gCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGc > 1:202367/1‑150 (MQ=255) gTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGccc < 2:2378656/150‑1 (MQ=255) tATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGcccc > 2:3364205/1‑150 (MQ=255) tATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGcccc > 2:4353706/1‑150 (MQ=255) ttAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACTTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGAACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGa > 2:161994/1‑150 (MQ=255) ttAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGa > 1:4045443/1‑150 (MQ=255) ttAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCACCCCGa > 1:3285256/1‑150 (MQ=255) tAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGAc < 2:576510/150‑1 (MQ=255) gTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGc < 1:807300/150‑1 (MQ=255) ttCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGTCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAgg > 1:690571/1‑150 (MQ=255) ttCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAgg < 2:1243100/150‑1 (MQ=255) tCTGAATAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAggg < 1:958168/150‑1 (MQ=255) cTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGgc > 2:358323/1‑150 (MQ=255) tGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGgcg < 2:3296471/150‑1 (MQ=255) gaTAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCt > 2:156310/2‑150 (MQ=255) aTAACCTGCTTGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTg > 1:1259096/1‑150 (MQ=255) tAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGa < 1:1026648/150‑1 (MQ=255) aaCCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGAt > 2:4130584/1‑150 (MQ=255) aaCCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGAt < 1:2052716/150‑1 (MQ=255) aCCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATg > 2:486348/1‑150 (MQ=255) aCCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATg < 1:264737/150‑1 (MQ=255) ccTGCTTGTACTGACGCTCATCCAGCTCACGTTATTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGt < 1:4228407/150‑1 (MQ=255) cTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTAccc < 2:4564209/150‑1 (MQ=255) tGTACTGACTCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCAt > 1:213179/1‑150 (MQ=255) tGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCAt < 2:1764439/150‑1 (MQ=255) gTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATc > 1:2391032/1‑150 (MQ=255) gTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATc > 1:695138/1‑150 (MQ=255) gTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATc < 1:4179646/150‑1 (MQ=255) aCTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCTGGGCGCTGATGTACCCATCGc > 2:4181154/1‑150 (MQ=255) aCTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGc > 1:4327324/1‑150 (MQ=255) gACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTGa > 2:3975118/1‑150 (MQ=255) gACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTGa > 2:4436053/1‑150 (MQ=255) | CGTCTCTTTTGCCGTCTCGACAGCCTGACGCACTTTCCAGTAGTTGTTACGGCCTTTAACGTGCAGCTCAGTCAGAAAGCAGACCGCTTCCATTGAGCCAGTATCATTCAGCGTATTAATGGTTTTCTGAATAACCTGCTTGTACTGACGCTCATCCAGCTCACGTTCTTTGCCGCAACCAATAAGGAGAATTCGCTCGGAAAGTACATTCGGAACATGGTGCAGCAACAATGTCTGCCCCGGTTTTCCTTCCAGTTCGCCCCGACGTAGCAGGGCGCTGATGTACCCATCGCTGATTT > CP009273/4475361‑4475659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |