| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,565,742 | C→A | 5.4% | pseudogene (2007/2937 nt) | yjiV → | pseudogene; conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,565,742 | 0 | C | A | 5.4% | 1140.8 / 25.4 | 294 | pseudogene (2007/2937 nt) | yjiV | pseudogene; conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (159/119); new base A (7/9); total (166/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 316 total aligned reads displayed.
AAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATCG > CP009273/4565593‑4565891 | aaGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGAtcgtgtcg < 2:278060/150‑1 (MQ=255) aaGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGAtcgtgtcg < 2:441717/150‑1 (MQ=255) gTCACAAGGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGAtcgtgtcgtg < 1:1227840/150‑1 (MQ=255) tCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTgg < 1:3519778/150‑1 (MQ=255) cacaATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGa > 2:2292703/1‑150 (MQ=255) cacaATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTAGTGGa > 2:3901531/1‑150 (MQ=255) caATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAg > 1:3138381/1‑150 (MQ=255) caATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAg < 2:4148271/150‑1 (MQ=255) aaTGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAgg > 2:3708298/1‑150 (MQ=255) ccGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggcggc < 2:380100/150‑1 (MQ=255) cGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggcggc > 1:1378796/1‑150 (MQ=255) cGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCt > 2:2149993/1‑150 (MQ=255) ggAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCtt < 2:423184/150‑1 (MQ=255) gAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTc > 2:2890272/1‑150 (MQ=255) aaaTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTct < 2:2708300/150‑1 (MQ=255) aTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTctac > 1:4159740/1‑150 (MQ=255) aTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTctac < 2:3153090/150‑1 (MQ=255) tCTGGAAGCTGGATCGTTAACTGGATGAGTACGCATAGGGTGTGGCAAATGCACGCGACTGGTTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑ATAACGTCTGGACAGACTTTAACGTTCGTGTAGTGGTAGGCGGCTTctact < 1:2602525/150‑1 (MQ=255) ggAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATc < 2:2205745/150‑1 (MQ=255) ggAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATc < 2:1259202/150‑1 (MQ=255) aGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTa > 2:111919/1‑150 (MQ=255) cTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGGGTCGTGGAAGGCGGCTTCTACTATCGTACt < 2:1822577/150‑1 (MQ=255) tGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTg > 2:4060428/1‑150 (MQ=255) cacaGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCAct > 1:3840232/1‑150 (MQ=255) aGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTg > 1:4524550/1‑150 (MQ=255) ggAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGc > 2:102085/1‑150 (MQ=255) gAAGACTACGCAGTGGGTCTGTCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGT‑AAAAAGTCTGGAGAGACATTAACGATCTTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGcg < 2:716022/150‑2 (MQ=255) gAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGcc < 2:2604965/150‑1 (MQ=255) aaGACTACGCAGAGGGTCTGGCAATAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGccc > 2:4019915/1‑150 (MQ=255) aaGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGccc > 1:2695951/1‑150 (MQ=255) aaGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGccc < 2:1563093/150‑1 (MQ=255) aGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCca < 2:3505976/150‑1 (MQ=255) gACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCcag > 1:611138/1‑150 (MQ=255) aCTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCcagc > 2:3354737/1‑150 (MQ=255) cAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgt > 2:3633376/1‑150 (MQ=255) agagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgtc > 2:1547350/1‑150 (MQ=255) agagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgtc > 2:148574/1‑150 (MQ=255) agagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgtc > 2:1151656/1‑150 (MQ=255) agagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgtc > 1:3821114/1‑150 (MQ=255) gagGGTCGGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCa < 1:505339/150‑1 (MQ=255) gTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAAc < 2:482332/150‑1 (MQ=255) tCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACg < 1:2048628/150‑1 (MQ=255) tGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTc < 2:3866919/150‑1 (MQ=255) tGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTc > 1:1061267/1‑150 (MQ=255) tGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTc > 2:3210736/1‑150 (MQ=255) aaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCaaa < 1:1236101/150‑1 (MQ=255) aaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCaaa < 1:71966/150‑1 (MQ=255) gCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGc < 2:1656035/150‑1 (MQ=255) cACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCt > 1:3261633/1‑150 (MQ=255) cACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCt > 2:2371018/1‑150 (MQ=255) cgACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGa < 1:3414680/150‑1 (MQ=255) cTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGaaaa < 1:4360669/150‑1 (MQ=255) tGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAg < 2:804617/150‑1 (MQ=255) tGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAg > 1:3938808/1‑150 (MQ=255) gTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATg < 1:2259605/150‑1 (MQ=255) aGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTc < 2:1919675/150‑1 (MQ=255) aGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTc > 1:3737505/1‑150 (MQ=255) gCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCa < 1:1533646/150‑1 (MQ=255) gCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCa < 1:2782430/150‑1 (MQ=255) ccATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCaa < 1:3076074/150‑1 (MQ=255) cATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAg > 2:1521123/1‑150 (MQ=255) gATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAAt > 1:4502217/1‑150 (MQ=255) tCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATgg < 1:236522/150‑1 (MQ=255) tCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATgg < 2:4621780/150‑1 (MQ=255) cTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCaa < 2:2945387/150‑1 (MQ=255) tGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAAc < 1:1794628/150‑1 (MQ=255) gATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt < 1:2476617/150‑1 (MQ=255) gATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt > 1:4053290/1‑150 (MQ=255) gATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt < 2:4359227/150‑1 (MQ=255) aTCGCACAATTGCGGTCGGAAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt < 2:1378796/150‑1 (MQ=255) aaTTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTtc > 1:621318/1‑150 (MQ=255) aaTTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTtc > 1:2941250/1‑150 (MQ=255) aTTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTtct > 1:2909600/1‑150 (MQ=255) ttGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTtctc < 1:1991676/150‑1 (MQ=255) cGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAAc > 1:2661950/1‑150 (MQ=255) ggTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAATATGTTCAAGAATGGGCAACTAAATGTTCTCAACt > 1:1036977/1‑150 (MQ=255) gg‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTc > 1:3867121/1‑150 (MQ=255) aaaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTcca > 2:2468088/1‑150 (MQ=255) aaaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTcca > 2:2043825/1‑150 (MQ=255) aaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccacc > 1:563127/1‑150 (MQ=255) tCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccaccacca < 1:2110898/150‑1 (MQ=255) cTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCAt > 1:1770161/1‑150 (MQ=255) tGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATg > 2:1967472/1‑150 (MQ=255) tGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATg > 2:1665562/1‑150 (MQ=255) tGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATg > 1:86051/1‑150 (MQ=255) tGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATg > 1:86100/1‑150 (MQ=255) ggACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATgg < 2:2159484/150‑1 (MQ=255) gacagacaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGa > 1:1451428/1‑150 (MQ=255) agacaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAAt > 1:4129294/1‑150 (MQ=255) acaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATgg > 1:1944913/1‑150 (MQ=255) ttAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATggggg > 2:185184/1‑150 (MQ=255) aaCGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAATATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGtt < 1:2149993/150‑1 (MQ=255) aaCGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGtt < 2:3129608/150‑1 (MQ=255) aaCGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGtt > 2:295732/1‑150 (MQ=255) aaCGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGtt < 1:693243/150‑1 (MQ=255) cGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGa > 2:522820/1‑150 (MQ=255) cgtgtcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATAcc < 1:1820983/150‑1 (MQ=255) gtgtcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCg < 2:4595286/150‑1 (MQ=255) gtgtcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCg > 1:4103867/1‑150 (MQ=255) tcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATc < 1:4319877/150‑1 (MQ=255) | AAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGG‑AAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATCG > CP009273/4565593‑4565891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |