Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,586,861 G→T 51.5% intergenic (+32/+106) yjjN → / ← opgB L‑galactonate oxidoreductase/phosphoglycerol transferases I and II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,586,8610GT51.5% 90.2 / inf 248intergenic (+32/+106)yjjN/opgBL‑galactonate oxidoreductase/phosphoglycerol transferases I and II
Reads supporting (aligned to +/- strand):  ref base G (53/67);  new base T (57/71);  total (110/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01

Only 100 of 252 total aligned reads displayed.

AAAAATCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGA  >  CP009273/4586712‑4587007
                                                                                                                                                     |                                                                                                                                                  
aaaaaTCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCg                                                                                                                                                    >  2:1795380/1‑150 (MQ=255)
   aaTCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTcc                                                                                                                                                 <  1:1164111/150‑1 (MQ=255)
   aaTCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTcc                                                                                                                                                 <  1:3012321/150‑1 (MQ=255)
     tCACTGCTGACATGATGTTAACCCATCGCTTTCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTACAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCgg                                                                                                                                               <  1:289566/150‑1 (MQ=255)
     tCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAAATACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCgg                                                                                                                                               >  2:3556898/1‑150 (MQ=255)
      cACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCggg                                                                                                                                              <  2:2338331/150‑1 (MQ=255)
          gctgACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAg                                                                                                                                          <  1:4001766/150‑1 (MQ=255)
              aCATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGtt                                                                                                                                      <  1:1202843/150‑1 (MQ=255)
              aCATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGtt                                                                                                                                      >  2:3943817/1‑150 (MQ=255)
                atgatgTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTgg                                                                                                                                    <  2:3139833/150‑1 (MQ=255)
                atgatgTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTgg                                                                                                                                    <  2:1740174/150‑1 (MQ=255)
                     gTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCt                                                                                                                               >  1:3042705/1‑150 (MQ=255)
                        aaCCCATCGCTATCCGTTCGCCACGCGGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGtt                                                                                                                            <  2:495015/150‑1 (MQ=255)
                          cccATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGtttt                                                                                                                          <  1:4368010/150‑1 (MQ=255)
                          cccATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGGTGGGCGCTGtttt                                                                                                                          >  1:923593/1‑150 (MQ=255)
                           ccATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGttttt                                                                                                                         <  1:1958326/150‑1 (MQ=255)
                            cATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGtttttt                                                                                                                        >  1:142756/1‑150 (MQ=255)
                                gCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGt                                                                                                                    >  1:4039214/1‑150 (MQ=255)
                                gCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGt                                                                                                                    >  2:3472335/1‑150 (MQ=255)
                                 cTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGtt                                                                                                                   <  1:2288217/150‑1 (MQ=255)
                                   aTCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTc                                                                                                                 >  1:3126334/1‑150 (MQ=255)
                                    tCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCt                                                                                                                <  2:1462104/150‑1 (MQ=255)
                                    tCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCt                                                                                                                <  2:3373394/150‑1 (MQ=255)
                                    tCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTGTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCt                                                                                                                <  2:667355/150‑1 (MQ=255)
                                     cctttCGCCACGCTGGCAGAAACCTACGCGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGAGTAATTTCTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCtt                                                                                                               <  2:2179619/147‑1 (MQ=255)
                                     ccGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCtt                                                                                                               <  1:3994854/150‑1 (MQ=255)
                                     ccGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCtt                                                                                                               <  2:108087/150‑1 (MQ=255)
                                       gTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTtaa                                                                                                             >  2:4233762/1‑150 (MQ=255)
                                        ttCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTtaat                                                                                                            >  1:235132/1‑150 (MQ=255)
                                        ttCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTtaat                                                                                                            <  2:3102541/150‑1 (MQ=255)
                                        ttCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTtaat                                                                                                            <  1:2962082/150‑1 (MQ=255)
                                          cGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTtaataa                                                                                                          <  1:4477481/150‑1 (MQ=255)
                                                  tGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGtgttgt                                                                                                  <  2:2463136/150‑1 (MQ=255)
                                                   ggCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTa                                                                                                 <  2:1768913/150‑1 (MQ=255)
                                                      aGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGc                                                                                              >  1:4140767/1‑150 (MQ=255)
                                                         aaCCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGt                                                                                           >  2:633156/1‑150 (MQ=255)
                                                            cTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGa                                                                                        >  1:4430762/1‑150 (MQ=255)
                                                                  gcgcGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCgt                                                                                  <  2:2889752/150‑1 (MQ=255)
                                                                     cgATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTa                                                                               <  1:3030705/150‑1 (MQ=255)
                                                                      gATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAg                                                                              <  2:3424525/150‑1 (MQ=255)
                                                                      gATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAg                                                                              >  2:1871903/1‑150 (MQ=255)
                                                                           gATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGc                                                                         <  1:3734146/150‑1 (MQ=255)
                                                                             ttAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCAc                                                                       >  2:133341/1‑150 (MQ=255)
                                                                                aCAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCt                                                                    <  2:1743687/150‑1 (MQ=255)
                                                                                 cAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTa                                                                   <  1:3102556/150‑1 (MQ=255)
                                                                                 cAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGGGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTa                                                                   >  1:1082375/1‑150 (MQ=255)
                                                                                  aaTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTAt                                                                  <  2:1293792/150‑1 (MQ=255)
                                                                                  aaTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTAt                                                                  >  1:428120/1‑150 (MQ=255)
                                                                                  aaTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTAt                                                                  >  2:2519704/1‑150 (MQ=255)
                                                                                  aaTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTAt                                                                  <  1:33311/150‑1 (MQ=255)
                                                                                  aaTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTAt                                                                  <  1:33921/150‑1 (MQ=255)
                                                                                    tCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGc                                                                <  2:3211760/150‑1 (MQ=255)
                                                                                      gTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGa                                                              >  2:2778609/1‑150 (MQ=255)
                                                                                        gAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGAcc                                                            >  1:908247/1‑150 (MQ=255)
                                                                                         aGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCt                                                           >  2:580335/1‑150 (MQ=255)
                                                                                         aGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCt                                                           <  1:1592161/150‑1 (MQ=255)
                                                                                               ttaaAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAt                                                     <  1:2138929/150‑1 (MQ=255)
                                                                                                taaAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtc                                                    >  1:3957072/1‑150 (MQ=255)
                                                                                                 aaaGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtca                                                   >  2:4363289/1‑150 (MQ=255)
                                                                                                  aaGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtcag                                                  <  1:2151/150‑1 (MQ=255)
                                                                                                   aGGCGTCAGGACTTTCCGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCCTAAGAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCTCCCTACGCGACCTACACAtcagt                                                 <  2:157329/150‑1 (MQ=255)
                                                                                                       gTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAgg                                             >  1:2053212/1‑150 (MQ=255)
                                                                                                       gTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAgg                                             >  1:1765198/1‑150 (MQ=255)
                                                                                                         aaTTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGaa                                           >  2:2111523/1‑150 (MQ=255)
                                                                                                         aaTTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGaa                                           <  1:717988/150‑1 (MQ=255)
                                                                                                          aTTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAAt                                          <  1:2511548/150‑1 (MQ=255)
                                                                                                          aTTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAAt                                          <  1:3623626/150‑1 (MQ=255)
                                                                                                             aCTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTAc                                       >  2:4165230/1‑150 (MQ=255)
                                                                                                              cTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTAcc                                      >  1:1838985/1‑150 (MQ=255)
                                                                                                                ttCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCt                                    <  1:583139/150‑1 (MQ=255)
                                                                                                                  cTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTc                                  <  1:422056/150‑1 (MQ=255)
                                                                                                                    gATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCAGTATTAAATGTTTCTTAATAATGTGTTGAAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCATCAc                                >  1:2180297/1‑150 (MQ=255)
                                                                                                                    gATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCAc                                >  2:2974872/1‑150 (MQ=255)
                                                                                                                     aTAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACg                               <  1:3725450/150‑1 (MQ=255)
                                                                                                                     aTAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTATTAATAATTTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACg                               <  1:2675411/150‑1 (MQ=255)
                                                                                                                       aaGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGtt                             <  2:3393616/150‑1 (MQ=255)
                                                                                                                        aGGCGAGATTATTACAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCGTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTc                            <  2:2288756/150‑1 (MQ=255)
                                                                                                                          gCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTa                          <  1:321061/150‑1 (MQ=255)
                                                                                                                           cGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTAc                         >  2:756598/1‑150 (MQ=255)
                                                                                                                           cGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTAc                         >  1:1931092/1‑150 (MQ=255)
                                                                                                                                ttattaAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACtt                    <  1:4121459/150‑1 (MQ=255)
                                                                                                                                    taAAGTTGCCCTGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTACTTAATAAGGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAAt                <  2:2430696/150‑1 (MQ=255)
                                                                                                                                    taAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAAt                >  2:2057468/1‑150 (MQ=255)
                                                                                                                                    taAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGAACTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAAt                <  2:4441643/150‑1 (MQ=255)
                                                                                                                                    taAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAAt                <  1:3483285/150‑1 (MQ=255)
                                                                                                                                     aaaGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAAtt               <  1:524608/150‑1 (MQ=255)
                                                                                                                                       aGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTc             >  1:2266309/1‑150 (MQ=255)
                                                                                                                                        gTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTcc            >  2:2657553/1‑150 (MQ=255)
                                                                                                                                         ttGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTcca           >  2:610462/1‑150 (MQ=255)
                                                                                                                                         ttGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTcca           >  2:3320942/1‑150 (MQ=255)
                                                                                                                                           gCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTccacc         >  2:1263145/1‑150 (MQ=255)
                                                                                                                                            ccATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTccacca        <  1:3167390/150‑1 (MQ=255)
                                                                                                                                             cATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCAt       >  1:1098341/1‑150 (MQ=255)
                                                                                                                                              aTGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATg      <  1:1527569/150‑1 (MQ=255)
                                                                                                                                              aTGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATg      <  1:2435287/150‑1 (MQ=255)
                                                                                                                                              aTGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATg      <  2:4617733/150‑1 (MQ=255)
                                                                                                                                                gCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGcc    <  1:4609175/150‑1 (MQ=255)
                                                                                                                                                 cAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCg   <  2:1064621/150‑1 (MQ=255)
                                                                                                                                                  aGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGa  >  2:1623080/1‑150 (MQ=255)
                                                                                                                                                  aGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGa  >  1:1963753/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
AAAAATCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGA  >  CP009273/4586712‑4587007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: