| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 602,195 | C→A | 10.6% | T215T (ACG→ACT) | ybdK ← | weak gamma‑glutamyl:cysteine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 602,195 | 0 | C | A | 10.6% | 988.0 / 57.2 | 269 | T215T (ACG→ACT) | ybdK | weak gamma‑glutamyl:cysteine ligase |
| Reads supporting (aligned to +/- strand): ref base C (123/117); new base A (11/18); total (134/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 283 total aligned reads displayed.
TAACCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGACGCG > CP009273/602048‑602342 | tAACCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgt > 2:3242805/1‑150 (MQ=255) aaCCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtg > 2:3619736/1‑150 (MQ=255) aaCCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGAGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCAACGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtg > 2:1410574/1‑150 (MQ=255) ccAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtggt < 1:3390601/150‑1 (MQ=255) ccAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtggt < 1:1456295/150‑1 (MQ=255) cAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCgtggtg > 1:2417521/1‑150 (MQ=255) aGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGgtgt < 2:644471/150‑1 (MQ=255) tGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTaa < 1:1190717/150‑1 (MQ=255) ggTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAg < 1:3168114/150‑1 (MQ=255) ggTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAg < 1:1793695/150‑1 (MQ=255) tAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGAc < 2:481548/150‑1 (MQ=255) aGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACa > 2:4191982/1‑150 (MQ=255) gCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAg < 2:2365477/150‑1 (MQ=255) tGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGa > 1:1377173/1‑150 (MQ=255) tAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAg > 1:1179219/1‑150 (MQ=255) tAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAg < 1:1256075/150‑1 (MQ=255) aaTCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAgg < 2:675859/150‑1 (MQ=255) aaTCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAgg < 1:1647597/150‑1 (MQ=255) gCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCa > 1:4295812/1‑150 (MQ=255) ccATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCaa > 1:861700/1‑150 (MQ=255) ttACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAAttgtt > 1:1578738/1‑150 (MQ=255) tGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCGTCAAATTGTTGCCa > 2:4308993/1‑150 (MQ=255) gTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGtt < 2:4537061/150‑1 (MQ=255) tGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCCTCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTa > 2:1321789/1‑150 (MQ=255) cTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTg > 2:3614740/1‑150 (MQ=255) cTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTg > 1:1133805/1‑150 (MQ=255) aaGGGTTAACTTTGTATCAATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTATATCATCGTTGTGTAACTCAGACATCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGAc < 2:3355841/150‑1 (MQ=255) aaGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGAc < 1:2763505/150‑1 (MQ=255) ggTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCa < 1:2554476/150‑1 (MQ=255) tttAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCAc > 2:4320647/2‑150 (MQ=255) gTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCAc > 2:1832467/1‑150 (MQ=255) aaCGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGc > 2:3937259/1‑150 (MQ=255) ggggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATc > 1:492708/1‑150 (MQ=255) ggggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATc < 2:1219307/150‑1 (MQ=255) gggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCg < 1:2841647/150‑1 (MQ=255) gggTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCg < 1:2841623/150‑1 (MQ=255) gTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGTATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCggg < 2:726331/150‑1 (MQ=255) tCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCa < 1:1627512/150‑1 (MQ=255) cATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCAtt < 2:4326611/150‑1 (MQ=255) cATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCAtt < 1:535201/150‑1 (MQ=255) aTCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTa > 2:1955512/1‑150 (MQ=255) aTCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTa < 1:1194276/150‑1 (MQ=255) aTCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTa < 2:2126940/150‑1 (MQ=255) tCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTAt > 1:2992022/1‑150 (MQ=255) cACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATc > 2:3690403/1‑150 (MQ=255) cACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATc < 2:2793615/150‑1 (MQ=255) cccGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAg < 2:1021646/150‑1 (MQ=255) ccGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAgg < 2:946769/150‑1 (MQ=255) aaCCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGaaa > 2:28506/1‑150 (MQ=255) aCCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAg < 2:1196119/150‑1 (MQ=255) cGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGaaaa < 1:3157971/150‑1 (MQ=255) tGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGaaaaaa < 1:1343332/150‑1 (MQ=255) cAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAatat > 2:2678899/1‑150 (MQ=255) aaaaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATAtt < 1:4452912/150‑1 (MQ=255) aaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCg < 2:114344/150‑1 (MQ=255) aaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCg < 1:3914082/150‑1 (MQ=255) aaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCg < 2:4140776/150‑1 (MQ=255) aaTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCg < 1:1558335/150‑1 (MQ=255) aTGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCgg > 2:4486242/1‑150 (MQ=255) tGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGt < 2:2598096/150‑1 (MQ=255) tGAGGACTGGGGCGAATATCCCAGTGCAGATATTTAATGCTGTCGATCATCGTGTTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAATGCGGAAAAAATATTCGGt < 2:3878200/150‑1 (MQ=255) aGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCg < 2:2268863/150‑1 (MQ=255) gACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTg < 1:663567/150‑1 (MQ=255) ggggCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTgagga < 1:1522114/150‑1 (MQ=255) gggCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTgaggag < 1:34005/150‑1 (MQ=255) gggCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTgaggag < 2:3445795/150‑1 (MQ=255) ggagAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTTACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCGAGTTACTGACCCACGGCATCGGGCCATTATCTGGAAAGGCGGAAAAAATATTCGGTCGTGaggagg < 1:4425568/147‑1 (MQ=255) gCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGc > 1:2652896/1‑150 (MQ=255) cGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCa < 2:4621238/150‑1 (MQ=255) cGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCa < 2:2586583/150‑1 (MQ=255) gAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCaa > 1:2117213/1‑150 (MQ=255) atatCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCaaaa > 1:3248797/1‑150 (MQ=255) atatCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCaaaa > 1:3475476/1‑150 (MQ=255) atatCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCaaaa > 1:3033647/1‑150 (MQ=255) tatCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAAc > 2:1089716/1‑150 (MQ=255) cccAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAAcgcg > 1:81018/1‑150 (MQ=255) ccAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGt < 2:4385072/150‑1 (MQ=255) cAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTa > 1:1122574/1‑150 (MQ=255) aGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTAt < 1:3509827/150‑1 (MQ=255) aGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTAt > 1:402921/1‑150 (MQ=255) aGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTAt > 2:696355/1‑150 (MQ=255) aGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTAt > 2:1576807/1‑150 (MQ=255) aTCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTcc < 1:1963209/150‑1 (MQ=255) cTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCt < 1:3714444/150‑1 (MQ=255) tttAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTg < 2:2449485/150‑1 (MQ=255) tttAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTg < 1:3200004/150‑1 (MQ=255) tAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCa > 2:2526757/1‑150 (MQ=255) aTGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCata < 1:4205806/150‑1 (MQ=255) tGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCatat > 2:3156274/1‑150 (MQ=255) tGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCCTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCatat > 2:714923/1‑150 (MQ=255) cTGTCGATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCatatat > 1:913359/1‑150 (MQ=255) tGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATg < 2:1706437/150‑1 (MQ=255) gATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGa > 1:1874051/1‑150 (MQ=255) gATCATAGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGa > 1:3051916/1‑150 (MQ=255) atcatcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAc > 1:3356054/1‑150 (MQ=255) catcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAcgc > 2:1298040/1‑150 (MQ=255) catcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAcgc > 1:1061081/1‑150 (MQ=255) atcGTGGTGTAACTCAGACAGCGAACCAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATTTGGCGAcgcg < 2:1864541/150‑1 (MQ=255) atcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAcgcg < 2:2085888/150‑1 (MQ=255) atcGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGAcgcg > 2:1183391/1‑150 (MQ=255) | TAACCAGTGGGCGGTAGCCTGAATTAATCCCGCCATATTTACTGCGTGGCTAAGGGTTAACGGGGTATCCATCACCCGAACCTCCACCGTGCCAAAATGAGGACTGGGGCGAATATCCCAGTGCAGATCTTTAATGCTGTCGATCATCGTGGTGTAACTCAGACAGCGAAACAGGGCTTCAAATTGTTGCCAGTTACTGACCCACGGCATCGGGCCATTATCAGGAAAGGCGGAAAAAATATTCGGTCGTGAGGAGGCAAAACGCGTATCCGTTCCCTGCATATATGGCGACGCG > CP009273/602048‑602342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |